Protein–RNA interactions for Protein: A0A075B638

Trav4-2, T cell receptor alpha variable 4-2 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav4-2A0A075B638 Dnajb2-202ENSMUST00000082158 1253 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
Trav4-2A0A075B638 Gm7199-201ENSMUST00000118327 1485 ntBASIC17.15■□□□□ 0.34
Trav4-2A0A075B638 Fbxw2-204ENSMUST00000113077 1670 ntTSL 5 BASIC17.15■□□□□ 0.34
Trav4-2A0A075B638 Morf4l1-201ENSMUST00000085248 1882 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Trav4-2A0A075B638 Fam102b-202ENSMUST00000171143 5702 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Trav4-2A0A075B638 6430628N08Rik-201ENSMUST00000132221 1605 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Trav4-2A0A075B638 Specc1-206ENSMUST00000201015 1789 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.33
Trav4-2A0A075B638 Azin2-202ENSMUST00000106068 2049 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
Trav4-2A0A075B638 Hp1bp3-205ENSMUST00000105827 5155 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.33
Trav4-2A0A075B638 Tmem106c-201ENSMUST00000064200 1635 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Trav4-2A0A075B638 Eid1-201ENSMUST00000164756 1691 ntAPPRIS P1 BASIC17.13■□□□□ 0.33
Trav4-2A0A075B638 Mxd4-202ENSMUST00000119171 1160 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Trav4-2A0A075B638 Six5-201ENSMUST00000049454 3007 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Trav4-2A0A075B638 Tsen34-211ENSMUST00000205287 1375 ntTSL 5 BASIC17.13■□□□□ 0.33
Trav4-2A0A075B638 Cnep1r1-201ENSMUST00000095214 1731 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Trav4-2A0A075B638 B4galt1-202ENSMUST00000108096 1413 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Trav4-2A0A075B638 Macrod2-207ENSMUST00000110067 4730 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
Trav4-2A0A075B638 Hist2h3c1-201ENSMUST00000176059 1820 ntAPPRIS P1 BASIC17.12■□□□□ 0.33
Trav4-2A0A075B638 Hist2h3c1-202ENSMUST00000177796 1825 ntBASIC17.12■□□□□ 0.33
Trav4-2A0A075B638 BC022687-201ENSMUST00000037014 1960 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Trav4-2A0A075B638 Cdx1-201ENSMUST00000025521 1750 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Trav4-2A0A075B638 Zcchc2-201ENSMUST00000118196 5796 ntAPPRIS P4 TSL 5 BASIC17.11■□□□□ 0.33
Trav4-2A0A075B638 Efcc1-201ENSMUST00000032132 2729 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
Trav4-2A0A075B638 Nnat-208ENSMUST00000173595 927 ntTSL 2 BASIC17.11■□□□□ 0.33
Trav4-2A0A075B638 Ankrd49-205ENSMUST00000216037 1037 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
Trav4-2A0A075B638 Nab2-202ENSMUST00000099157 2311 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Trav4-2A0A075B638 Tcte2-202ENSMUST00000127032 1875 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Trav4-2A0A075B638 Tifa-202ENSMUST00000163775 1646 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Trav4-2A0A075B638 Faap24-201ENSMUST00000032704 1857 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Trav4-2A0A075B638 Msto1-201ENSMUST00000107494 2093 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Trav4-2A0A075B638 Zcchc14-201ENSMUST00000046386 7444 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Trav4-2A0A075B638 6430628N08Rik-202ENSMUST00000165938 1602 ntTSL 5 BASIC17.1■□□□□ 0.33
Trav4-2A0A075B638 Gm10642-201ENSMUST00000098589 1610 ntAPPRIS P1 BASIC17.1■□□□□ 0.33
Trav4-2A0A075B638 Nab2-201ENSMUST00000026469 2582 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Trav4-2A0A075B638 1700069B07Rik-202ENSMUST00000191155 939 ntBASIC17.09■□□□□ 0.33
Trav4-2A0A075B638 Ell2-205ENSMUST00000222194 434 ntTSL 3 BASIC17.09■□□□□ 0.33
Trav4-2A0A075B638 4930526A20Rik-202ENSMUST00000142461 1628 ntBASIC17.09■□□□□ 0.33
Trav4-2A0A075B638 Adgrb1-201ENSMUST00000042035 6228 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Trav4-2A0A075B638 Btbd19-209ENSMUST00000183310 1620 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
Trav4-2A0A075B638 Zfp69-201ENSMUST00000106280 2362 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
Trav4-2A0A075B638 4930597O21Rik-201ENSMUST00000065878 984 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Trav4-2A0A075B638 Sh3rf3-202ENSMUST00000135526 1940 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Trav4-2A0A075B638 Gm45869-201ENSMUST00000210335 1704 ntTSL 5 BASIC17.07■□□□□ 0.32
Trav4-2A0A075B638 Rcor3-206ENSMUST00000192491 1623 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Trav4-2A0A075B638 Kcng2-201ENSMUST00000077962 2813 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
Trav4-2A0A075B638 Fads2-201ENSMUST00000025567 1508 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Trav4-2A0A075B638 Plk5-201ENSMUST00000039836 2112 ntAPPRIS P3 TSL 2 BASIC17.06■□□□□ 0.32
Trav4-2A0A075B638 Spry1-203ENSMUST00000108109 2451 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Trav4-2A0A075B638 Spry1-201ENSMUST00000038569 2481 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Trav4-2A0A075B638 Ints11-201ENSMUST00000030901 2368 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Trav4-2A0A075B638 Tinagl1-209ENSMUST00000175992 1847 ntAPPRIS ALT2 TSL 5 BASIC17.06■□□□□ 0.32
Trav4-2A0A075B638 Mxra7-202ENSMUST00000047715 757 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Trav4-2A0A075B638 Dlk2-204ENSMUST00000170271 1783 ntTSL 5 BASIC17.06■□□□□ 0.32
Trav4-2A0A075B638 Nr5a1-202ENSMUST00000112883 2994 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Trav4-2A0A075B638 Papd7-202ENSMUST00000198607 4750 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Trav4-2A0A075B638 Galr2-201ENSMUST00000055872 1940 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Trav4-2A0A075B638 Txnrd2-216ENSMUST00000206606 1809 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Trav4-2A0A075B638 Socs2-201ENSMUST00000020215 2222 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Trav4-2A0A075B638 Pwwp2b-202ENSMUST00000172136 2543 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Trav4-2A0A075B638 Hs6st3-201ENSMUST00000065904 1708 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Trav4-2A0A075B638 Prdm13-202ENSMUST00000095141 3173 ntAPPRIS P2 TSL 2 BASIC17.05■□□□□ 0.32
Trav4-2A0A075B638 Gm40983-202ENSMUST00000222598 1198 ntTSL 5 BASIC17.05■□□□□ 0.32
Trav4-2A0A075B638 Jak2-202ENSMUST00000065796 5030 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
Trav4-2A0A075B638 Ankrd54-201ENSMUST00000040676 1904 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Trav4-2A0A075B638 Socs2-213ENSMUST00000170690 2195 ntAPPRIS P1 TSL 3 BASIC17.04■□□□□ 0.32
Trav4-2A0A075B638 Dynll2-201ENSMUST00000020775 2476 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Trav4-2A0A075B638 Nog-201ENSMUST00000061728 1695 ntAPPRIS P1 BASIC17.04■□□□□ 0.32
Trav4-2A0A075B638 Neo1-202ENSMUST00000214547 5414 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Trav4-2A0A075B638 Yy1-201ENSMUST00000021692 6178 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Trav4-2A0A075B638 Podxl2-210ENSMUST00000145944 2065 ntAPPRIS ALT2 TSL 5 BASIC17.03■□□□□ 0.32
Trav4-2A0A075B638 Tmcc1-202ENSMUST00000088896 5838 ntAPPRIS P2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Trav4-2A0A075B638 Gpr160-204ENSMUST00000108261 2213 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Trav4-2A0A075B638 Tmem164-206ENSMUST00000112896 5224 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Trav4-2A0A075B638 Gm15156-201ENSMUST00000148217 417 ntTSL 3 BASIC17.03■□□□□ 0.32
Trav4-2A0A075B638 AC153911.1-201ENSMUST00000220378 758 ntBASIC17.03■□□□□ 0.32
Trav4-2A0A075B638 Dtnbp1-201ENSMUST00000072329 1362 ntAPPRIS P2 TSL 1 (best) BASIC17.02■□□□□ 0.32
Trav4-2A0A075B638 Gm13889-201ENSMUST00000099689 1386 ntBASIC17.02■□□□□ 0.32
Trav4-2A0A075B638 Dlg3-201ENSMUST00000000901 4885 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Trav4-2A0A075B638 Tbc1d10a-206ENSMUST00000180088 1921 ntAPPRIS P2 TSL 1 (best) BASIC17.02■□□□□ 0.32
Trav4-2A0A075B638 Rasgrf2-206ENSMUST00000216219 2115 ntTSL 5 BASIC17.02■□□□□ 0.32
Trav4-2A0A075B638 Dpf1-201ENSMUST00000049977 2309 ntAPPRIS P2 TSL 1 (best) BASIC17.02■□□□□ 0.32
Trav4-2A0A075B638 Puf60-202ENSMUST00000100527 1878 ntAPPRIS P4 TSL 1 (best) BASIC17.02■□□□□ 0.32
Trav4-2A0A075B638 C1qtnf5-201ENSMUST00000114815 1215 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Trav4-2A0A075B638 Hecw2-202ENSMUST00000097741 1132 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Trav4-2A0A075B638 Cobll1-204ENSMUST00000112430 4917 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
Trav4-2A0A075B638 A830010M20Rik-207ENSMUST00000162298 1408 ntTSL 5 BASIC17.02■□□□□ 0.31
Trav4-2A0A075B638 Evx2-202ENSMUST00000173623 1428 ntAPPRIS P2 TSL 1 (best) BASIC17.02■□□□□ 0.31
Trav4-2A0A075B638 Tab2-204ENSMUST00000146444 4380 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.31
Trav4-2A0A075B638 Barhl1-203ENSMUST00000113849 2102 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Trav4-2A0A075B638 Nkx2-2-201ENSMUST00000067075 2120 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Trav4-2A0A075B638 Msx3-202ENSMUST00000172775 2070 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Trav4-2A0A075B638 Slc26a10-201ENSMUST00000095270 2215 ntAPPRIS P2 TSL 5 BASIC17.01■□□□□ 0.31
Trav4-2A0A075B638 Dtnb-210ENSMUST00000173199 2820 ntAPPRIS ALT2 TSL 5 BASIC17.01■□□□□ 0.31
Trav4-2A0A075B638 Gm28052-201ENSMUST00000150388 380 ntTSL 3 BASIC17.01■□□□□ 0.31
Trav4-2A0A075B638 Fam193a-202ENSMUST00000180376 5536 ntAPPRIS P5 TSL 5 BASIC17.01■□□□□ 0.31
Trav4-2A0A075B638 Kctd2-202ENSMUST00000106533 2649 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Trav4-2A0A075B638 Sirt1-203ENSMUST00000120239 4430 ntAPPRIS P3 TSL 5 BASIC17.01■□□□□ 0.31
Trav4-2A0A075B638 Msrb1-201ENSMUST00000101800 1211 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Trav4-2A0A075B638 Gm42809-201ENSMUST00000198429 1138 ntBASIC17■□□□□ 0.31
Trav4-2A0A075B638 Eml2-202ENSMUST00000117338 2765 ntAPPRIS ALT2 TSL 5 BASIC17■□□□□ 0.31
Retrieved 100 of 76,532 protein–RNA pairs in 111.5 ms