Protein–RNA interactions for Protein: Q9Z0D9

Cx3cr1, CX3C chemokine receptor 1, mousemouse

Predictions only

Length 354 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cx3cr1Q9Z0D9 Sbk2-205ENSMUST00000208109 1422 ntTSL 5 BASIC11.6□□□□□ -0.55
Cx3cr1Q9Z0D9 Mpv17-201ENSMUST00000154241 1724 ntAPPRIS P3 TSL 1 (best) BASIC11.6□□□□□ -0.55
Cx3cr1Q9Z0D9 Mff-201ENSMUST00000073025 1706 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Cx3cr1Q9Z0D9 Zkscan14-203ENSMUST00000198959 2243 ntBASIC11.6□□□□□ -0.55
Cx3cr1Q9Z0D9 Ctsa-203ENSMUST00000103093 2534 ntAPPRIS ALT2 TSL 1 (best) BASIC11.6□□□□□ -0.55
Cx3cr1Q9Z0D9 Hmga2-203ENSMUST00000159699 3810 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Cx3cr1Q9Z0D9 Evi5l-203ENSMUST00000176149 3938 ntAPPRIS ALT2 TSL 5 BASIC11.6□□□□□ -0.55
Cx3cr1Q9Z0D9 Sesn3-204ENSMUST00000208222 9125 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Cx3cr1Q9Z0D9 Vcpip1-201ENSMUST00000057438 9749 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Cx3cr1Q9Z0D9 Mapt-204ENSMUST00000106992 5253 ntAPPRIS ALT2 TSL 1 (best) BASIC11.6□□□□□ -0.55
Cx3cr1Q9Z0D9 Ifnlr1-201ENSMUST00000074408 4182 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Cx3cr1Q9Z0D9 Gpr153-203ENSMUST00000105651 3777 ntAPPRIS P2 TSL 5 BASIC11.6□□□□□ -0.55
Cx3cr1Q9Z0D9 Gpr153-201ENSMUST00000055754 3757 ntAPPRIS P2 TSL 1 (best) BASIC11.6□□□□□ -0.55
Cx3cr1Q9Z0D9 Afdn-216ENSMUST00000170827 7338 ntAPPRIS ALT2 TSL 5 BASIC11.6□□□□□ -0.55
Cx3cr1Q9Z0D9 H2-Q6-202ENSMUST00000174699 2085 ntAPPRIS P1 TSL 5 BASIC11.6□□□□□ -0.55
Cx3cr1Q9Z0D9 Rbm47-204ENSMUST00000113726 4703 ntAPPRIS P3 TSL 1 (best) BASIC11.6□□□□□ -0.55
Cx3cr1Q9Z0D9 Adcyap1r1-206ENSMUST00000167234 1575 ntAPPRIS ALT2 TSL 5 BASIC11.6□□□□□ -0.55
Cx3cr1Q9Z0D9 Krt16-201ENSMUST00000007280 1565 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Cx3cr1Q9Z0D9 Egr3-204ENSMUST00000225200 3940 ntAPPRIS P2 BASIC11.6□□□□□ -0.55
Cx3cr1Q9Z0D9 Gm12350-201ENSMUST00000121208 462 ntBASIC11.6□□□□□ -0.55
Cx3cr1Q9Z0D9 Gm17968-201ENSMUST00000194902 784 ntBASIC11.6□□□□□ -0.55
Cx3cr1Q9Z0D9 AA619741-201ENSMUST00000195095 646 ntBASIC11.6□□□□□ -0.55
Cx3cr1Q9Z0D9 Rab28-205ENSMUST00000202913 863 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Cx3cr1Q9Z0D9 Gm44107-201ENSMUST00000203242 573 ntTSL 2 BASIC11.6□□□□□ -0.55
Cx3cr1Q9Z0D9 Gm9449-201ENSMUST00000207265 1011 ntBASIC11.6□□□□□ -0.55
Cx3cr1Q9Z0D9 Gm32351-201ENSMUST00000220503 438 ntTSL 5 BASIC11.6□□□□□ -0.55
Cx3cr1Q9Z0D9 AC159295.1-201ENSMUST00000225326 940 ntBASIC11.6□□□□□ -0.55
Cx3cr1Q9Z0D9 Oxt-201ENSMUST00000028764 537 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Cx3cr1Q9Z0D9 Eef1akmt2-201ENSMUST00000033257 1107 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Cx3cr1Q9Z0D9 Atad3aos-201ENSMUST00000067628 971 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Cx3cr1Q9Z0D9 Unc5d-201ENSMUST00000168630 9220 ntAPPRIS P3 TSL 1 (best) BASIC11.6□□□□□ -0.55
Cx3cr1Q9Z0D9 Umad1-204ENSMUST00000159433 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC11.6□□□□□ -0.55
Cx3cr1Q9Z0D9 Naa40-201ENSMUST00000025675 3275 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Cx3cr1Q9Z0D9 Pigq-209ENSMUST00000140304 1835 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Cx3cr1Q9Z0D9 Fxyd3-205ENSMUST00000167369 2894 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Cx3cr1Q9Z0D9 Bcat1-202ENSMUST00000048252 1642 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Cx3cr1Q9Z0D9 Gjb4-202ENSMUST00000106090 1446 ntAPPRIS P1 TSL 5 BASIC11.6□□□□□ -0.55
Cx3cr1Q9Z0D9 Phkg1-201ENSMUST00000026617 2374 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Cx3cr1Q9Z0D9 Gjb4-201ENSMUST00000060419 1445 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Cx3cr1Q9Z0D9 2900097C17Rik-202ENSMUST00000192863 4915 ntBASIC11.6□□□□□ -0.55
Cx3cr1Q9Z0D9 Gm42934-201ENSMUST00000196920 1345 ntBASIC11.6□□□□□ -0.55
Cx3cr1Q9Z0D9 Rnf214-201ENSMUST00000058720 3964 ntAPPRIS P3 TSL 1 (best) BASIC11.6□□□□□ -0.55
Cx3cr1Q9Z0D9 Klhl26-203ENSMUST00000209415 2919 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Cx3cr1Q9Z0D9 Pi4kb-201ENSMUST00000072287 3692 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Cx3cr1Q9Z0D9 Gm16010-202ENSMUST00000145410 4427 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Cx3cr1Q9Z0D9 Eme2-201ENSMUST00000119848 5226 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Cx3cr1Q9Z0D9 Crtc1-201ENSMUST00000076615 5683 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Cx3cr1Q9Z0D9 Rinl-201ENSMUST00000059857 2871 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Cx3cr1Q9Z0D9 Commd10-201ENSMUST00000049388 1561 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Cx3cr1Q9Z0D9 Chrdl1-203ENSMUST00000112878 4050 ntAPPRIS ALT2 TSL 5 BASIC11.59□□□□□ -0.55
Cx3cr1Q9Z0D9 Pus7-201ENSMUST00000119946 3407 ntAPPRIS P3 TSL 1 (best) BASIC11.59□□□□□ -0.55
Cx3cr1Q9Z0D9 Irf1-202ENSMUST00000108920 2137 ntAPPRIS P3 TSL 1 (best) BASIC11.59□□□□□ -0.55
Cx3cr1Q9Z0D9 Gm45242-201ENSMUST00000210666 2129 ntBASIC11.59□□□□□ -0.55
Cx3cr1Q9Z0D9 Celf5-203ENSMUST00000120508 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC11.59□□□□□ -0.55
Cx3cr1Q9Z0D9 Ppp1r13l-201ENSMUST00000047621 3130 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Cx3cr1Q9Z0D9 Pde8b-207ENSMUST00000162153 2474 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Cx3cr1Q9Z0D9 Fer-202ENSMUST00000038080 2365 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Cx3cr1Q9Z0D9 Ssr1-203ENSMUST00000225246 1825 ntBASIC11.59□□□□□ -0.55
Cx3cr1Q9Z0D9 Ulk3-201ENSMUST00000053230 2826 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Cx3cr1Q9Z0D9 Gm16046-203ENSMUST00000150889 1001 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Cx3cr1Q9Z0D9 Gm21362-201ENSMUST00000194272 928 ntBASIC11.59□□□□□ -0.55
Cx3cr1Q9Z0D9 2010107E04Rik-203ENSMUST00000222874 612 ntAPPRIS P1 TSL 2 BASIC11.59□□□□□ -0.55
Cx3cr1Q9Z0D9 Ndufs6-203ENSMUST00000222930 512 ntTSL 3 BASIC11.59□□□□□ -0.55
Cx3cr1Q9Z0D9 2010003K11Rik-201ENSMUST00000048482 1165 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Cx3cr1Q9Z0D9 Tst-201ENSMUST00000058659 1096 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Cx3cr1Q9Z0D9 Paox-202ENSMUST00000097967 1024 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Cx3cr1Q9Z0D9 Prkca-202ENSMUST00000100302 2265 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Cx3cr1Q9Z0D9 Arl4a-205ENSMUST00000146905 3710 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Cx3cr1Q9Z0D9 Lzts3-202ENSMUST00000089561 4169 ntAPPRIS P3 TSL 5 BASIC11.59□□□□□ -0.55
Cx3cr1Q9Z0D9 Prrxl1-203ENSMUST00000187377 1629 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Cx3cr1Q9Z0D9 Dyx1c1-202ENSMUST00000098567 1612 ntAPPRIS ALT2 TSL 5 BASIC11.59□□□□□ -0.55
Cx3cr1Q9Z0D9 Map2k6-202ENSMUST00000100260 2088 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Cx3cr1Q9Z0D9 Gm10433-202ENSMUST00000146364 1984 ntTSL 2 BASIC11.59□□□□□ -0.55
Cx3cr1Q9Z0D9 BC001981-202ENSMUST00000191393 1545 ntBASIC11.59□□□□□ -0.55
Cx3cr1Q9Z0D9 S1pr3-201ENSMUST00000087978 4463 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Cx3cr1Q9Z0D9 Dcst1-201ENSMUST00000070820 2342 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Cx3cr1Q9Z0D9 Rps6ka4-202ENSMUST00000170516 3105 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Cx3cr1Q9Z0D9 Sass6-206ENSMUST00000198386 1894 ntAPPRIS ALT2 TSL 1 (best) BASIC11.59□□□□□ -0.55
Cx3cr1Q9Z0D9 Rps6ka4-201ENSMUST00000025903 3105 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Cx3cr1Q9Z0D9 Kctd20-202ENSMUST00000117672 2219 ntTSL 5 BASIC11.59□□□□□ -0.55
Cx3cr1Q9Z0D9 Tfdp2-203ENSMUST00000165768 2212 ntAPPRIS ALT2 TSL 1 (best) BASIC11.59□□□□□ -0.55
Cx3cr1Q9Z0D9 Kcnt1-204ENSMUST00000114176 4166 ntAPPRIS ALT2 TSL 5 BASIC11.59□□□□□ -0.55
Cx3cr1Q9Z0D9 Man1a2-201ENSMUST00000008907 7969 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Cx3cr1Q9Z0D9 Rlbp1-201ENSMUST00000053718 2134 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Cx3cr1Q9Z0D9 Rab15-201ENSMUST00000021459 3158 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Cx3cr1Q9Z0D9 Mutyh-201ENSMUST00000102699 1654 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Cx3cr1Q9Z0D9 Krt36-201ENSMUST00000107416 1671 ntAPPRIS P1 TSL 5 BASIC11.59□□□□□ -0.55
Cx3cr1Q9Z0D9 Kcnk13-201ENSMUST00000049788 3078 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.55
Cx3cr1Q9Z0D9 Zyg11a-203ENSMUST00000223127 2283 ntAPPRIS ALT2 TSL 5 BASIC11.58□□□□□ -0.55
Cx3cr1Q9Z0D9 Itgb4-202ENSMUST00000068981 5584 ntAPPRIS ALT2 TSL 5 BASIC11.58□□□□□ -0.56
Cx3cr1Q9Z0D9 Dgcr8-202ENSMUST00000115633 4522 ntAPPRIS P1 TSL 5 BASIC11.58□□□□□ -0.56
Cx3cr1Q9Z0D9 Gse1-201ENSMUST00000034279 7127 ntAPPRIS P4 TSL 1 (best) BASIC11.58□□□□□ -0.56
Cx3cr1Q9Z0D9 Rbm20-204ENSMUST00000164202 6592 ntAPPRIS P1 TSL 5 BASIC11.58□□□□□ -0.56
Cx3cr1Q9Z0D9 Slc12a8-202ENSMUST00000117134 2081 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Cx3cr1Q9Z0D9 Hhatl-202ENSMUST00000163981 1744 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Cx3cr1Q9Z0D9 Sh3kbp1-206ENSMUST00000112456 7317 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Cx3cr1Q9Z0D9 Proca1-203ENSMUST00000108317 1359 ntAPPRIS ALT2 TSL 5 BASIC11.58□□□□□ -0.56
Cx3cr1Q9Z0D9 I730028E13Rik-201ENSMUST00000216012 1959 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Cx3cr1Q9Z0D9 Arhgap33-207ENSMUST00000208538 4372 ntAPPRIS P3 TSL 1 (best) BASIC11.58□□□□□ -0.56
Cx3cr1Q9Z0D9 Ebf1-202ENSMUST00000101326 3422 ntAPPRIS ALT1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Retrieved 100 of 76,532 protein–RNA pairs in 46 ms