Protein–RNA interactions for Protein: Q9WTU3

Scn8a, Sodium channel protein type 8 subunit alpha, mousemouse

Predictions only

Length 1,978 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn8aQ9WTU3 Slc43a1-203ENSMUST00000111625 2487 ntAPPRIS P4 TSL 1 (best) BASIC13.71□□□□□ -0.22
Scn8aQ9WTU3 Gm26559-201ENSMUST00000181939 2481 ntTSL 1 (best) BASIC13.71□□□□□ -0.22
Scn8aQ9WTU3 Zmym3-206ENSMUST00000120107 5882 ntAPPRIS ALT2 TSL 5 BASIC13.7□□□□□ -0.22
Scn8aQ9WTU3 Mcoln2-201ENSMUST00000011152 2520 ntAPPRIS P4 TSL 1 (best) BASIC13.7□□□□□ -0.22
Scn8aQ9WTU3 Apol6-206ENSMUST00000149569 2315 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Scn8aQ9WTU3 Prkcd-203ENSMUST00000112203 1927 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Scn8aQ9WTU3 Olfr533-202ENSMUST00000211093 2397 ntAPPRIS P1 TSL 3 BASIC13.7□□□□□ -0.22
Scn8aQ9WTU3 Pgbd5-201ENSMUST00000052580 2824 ntAPPRIS P2 TSL 5 BASIC13.7□□□□□ -0.22
Scn8aQ9WTU3 Tle1-204ENSMUST00000102848 3660 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Scn8aQ9WTU3 Rcsd1-201ENSMUST00000040357 2622 ntAPPRIS P4 TSL 1 (best) BASIC13.7□□□□□ -0.22
Scn8aQ9WTU3 Zfp146-201ENSMUST00000062181 2029 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Scn8aQ9WTU3 Ace-201ENSMUST00000001963 4906 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Scn8aQ9WTU3 Mmp2-201ENSMUST00000034187 3078 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Scn8aQ9WTU3 Ndufs5-202ENSMUST00000106206 599 ntAPPRIS P1 TSL 3 BASIC13.7□□□□□ -0.22
Scn8aQ9WTU3 Tpd52l2-203ENSMUST00000108799 985 ntTSL 5 BASIC13.7□□□□□ -0.22
Scn8aQ9WTU3 Rdh18-ps-201ENSMUST00000137395 944 ntBASIC13.7□□□□□ -0.22
Scn8aQ9WTU3 Rdh18-ps-202ENSMUST00000143917 953 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Scn8aQ9WTU3 1700092C10Rik-201ENSMUST00000172547 585 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Scn8aQ9WTU3 Pfdn6-205ENSMUST00000174426 396 ntTSL 2 BASIC13.7□□□□□ -0.22
Scn8aQ9WTU3 Gm26721-201ENSMUST00000181723 992 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Scn8aQ9WTU3 Ppil3-201ENSMUST00000081677 896 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Scn8aQ9WTU3 Tmem184c-201ENSMUST00000034030 2678 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Scn8aQ9WTU3 Cd81-201ENSMUST00000037941 1533 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Scn8aQ9WTU3 Gtf3c5-201ENSMUST00000028157 2739 ntAPPRIS P3 TSL 1 (best) BASIC13.7□□□□□ -0.22
Scn8aQ9WTU3 Scaf4-201ENSMUST00000039280 4165 ntAPPRIS P3 TSL 1 (best) BASIC13.7□□□□□ -0.22
Scn8aQ9WTU3 Matn3-201ENSMUST00000020899 3014 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Scn8aQ9WTU3 Chodl-203ENSMUST00000114216 1550 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Scn8aQ9WTU3 Gm16244-201ENSMUST00000159313 2327 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Scn8aQ9WTU3 Slc18b1-206ENSMUST00000179321 2843 ntTSL 5 BASIC13.7□□□□□ -0.22
Scn8aQ9WTU3 Lrp2bp-202ENSMUST00000110380 1603 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Scn8aQ9WTU3 Nfkb1-201ENSMUST00000029812 4117 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Scn8aQ9WTU3 Cacna2d3-201ENSMUST00000022567 3695 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Scn8aQ9WTU3 Dstyk-204ENSMUST00000188389 3232 ntTSL 5 BASIC13.7□□□□□ -0.22
Scn8aQ9WTU3 Vill-203ENSMUST00000126251 1411 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Scn8aQ9WTU3 Phyh-201ENSMUST00000027975 1438 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Scn8aQ9WTU3 Rbm15-201ENSMUST00000061772 4343 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Scn8aQ9WTU3 Trim24-203ENSMUST00000120428 3940 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Scn8aQ9WTU3 Socs3-201ENSMUST00000054002 2552 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Scn8aQ9WTU3 Pex12-202ENSMUST00000108146 2389 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Scn8aQ9WTU3 Rnf103-203ENSMUST00000114179 2671 ntAPPRIS P1 TSL 5 BASIC13.69□□□□□ -0.22
Scn8aQ9WTU3 Spatc1l-202ENSMUST00000105414 1060 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Scn8aQ9WTU3 Gm6447-201ENSMUST00000118905 835 ntBASIC13.69□□□□□ -0.22
Scn8aQ9WTU3 Olfr455-201ENSMUST00000171307 954 ntAPPRIS P1 BASIC13.69□□□□□ -0.22
Scn8aQ9WTU3 1700122O11Rik-201ENSMUST00000178823 771 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Scn8aQ9WTU3 Rpl18-208ENSMUST00000211061 552 ntTSL 5 BASIC13.69□□□□□ -0.22
Scn8aQ9WTU3 Rsph9-201ENSMUST00000024762 966 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Scn8aQ9WTU3 Crybb2-201ENSMUST00000031295 724 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Scn8aQ9WTU3 Tmem86b-201ENSMUST00000055085 1222 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Scn8aQ9WTU3 Tpcn1-201ENSMUST00000046426 4712 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Scn8aQ9WTU3 Sirpa-202ENSMUST00000099113 3342 ntTSL 3 BASIC13.69□□□□□ -0.22
Scn8aQ9WTU3 B230217C12Rik-202ENSMUST00000155954 2181 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Scn8aQ9WTU3 Dao-203ENSMUST00000161610 1633 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Scn8aQ9WTU3 4933434M16Rik-202ENSMUST00000153429 1940 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Scn8aQ9WTU3 Mdfic-201ENSMUST00000101663 3431 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Scn8aQ9WTU3 Prrg3-203ENSMUST00000170096 3408 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Scn8aQ9WTU3 Mdfic-207ENSMUST00000190255 3431 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Scn8aQ9WTU3 Apaf1-202ENSMUST00000159110 6433 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.22
Scn8aQ9WTU3 Mbp-207ENSMUST00000114674 2108 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Scn8aQ9WTU3 Hmbs-202ENSMUST00000097558 1534 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Scn8aQ9WTU3 Ccdc88b-201ENSMUST00000113440 4959 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Scn8aQ9WTU3 Lamc1-201ENSMUST00000027752 7622 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Scn8aQ9WTU3 Lims1-203ENSMUST00000105468 1205 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Scn8aQ9WTU3 Med28-203ENSMUST00000119579 636 ntTSL 3 BASIC13.69□□□□□ -0.22
Scn8aQ9WTU3 Gm11978-201ENSMUST00000122315 466 ntBASIC13.69□□□□□ -0.22
Scn8aQ9WTU3 Tldc2-202ENSMUST00000166140 639 ntAPPRIS P2 TSL 5 BASIC13.69□□□□□ -0.22
Scn8aQ9WTU3 Gm7029-201ENSMUST00000173226 450 ntBASIC13.69□□□□□ -0.22
Scn8aQ9WTU3 Krtap16-3-201ENSMUST00000179707 601 ntAPPRIS P1 BASIC13.69□□□□□ -0.22
Scn8aQ9WTU3 C330013E15Rik-201ENSMUST00000181034 878 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Scn8aQ9WTU3 Gm27331-201ENSMUST00000183705 60 ntBASIC13.69□□□□□ -0.22
Scn8aQ9WTU3 Chd3os-203ENSMUST00000218008 1026 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Scn8aQ9WTU3 Tmem242-201ENSMUST00000005053 948 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Scn8aQ9WTU3 1700120B22Rik-201ENSMUST00000054837 464 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Scn8aQ9WTU3 Haus7-202ENSMUST00000077243 1032 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Scn8aQ9WTU3 Garem2-201ENSMUST00000058045 3865 ntAPPRIS P1 TSL 5 BASIC13.69□□□□□ -0.22
Scn8aQ9WTU3 Ipo8-201ENSMUST00000048418 5360 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Scn8aQ9WTU3 A530083I20Rik-201ENSMUST00000180486 2421 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Scn8aQ9WTU3 Pfkfb3-212ENSMUST00000170196 2163 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Scn8aQ9WTU3 Prkx-202ENSMUST00000114044 2639 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Scn8aQ9WTU3 Gm15684-201ENSMUST00000160605 1814 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Scn8aQ9WTU3 Ngef-201ENSMUST00000027477 2746 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Scn8aQ9WTU3 Ptpn6-201ENSMUST00000004377 2308 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Scn8aQ9WTU3 Lysmd3-201ENSMUST00000049055 2338 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Scn8aQ9WTU3 Zfp422-202ENSMUST00000079749 3187 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Scn8aQ9WTU3 Dlat-201ENSMUST00000034567 4035 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Scn8aQ9WTU3 Gpd2-202ENSMUST00000112618 5759 ntTSL 5 BASIC13.68□□□□□ -0.22
Scn8aQ9WTU3 Fam57b-203ENSMUST00000205324 1915 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Scn8aQ9WTU3 Gm26878-201ENSMUST00000181778 1644 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Scn8aQ9WTU3 1700037C18Rik-202ENSMUST00000115859 2592 ntAPPRIS P2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Scn8aQ9WTU3 Casc4-204ENSMUST00000110586 4032 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Scn8aQ9WTU3 Wnt3a-201ENSMUST00000010044 2761 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Scn8aQ9WTU3 Gm14127-201ENSMUST00000117906 678 ntBASIC13.68□□□□□ -0.22
Scn8aQ9WTU3 Gm13829-201ENSMUST00000119600 138 ntBASIC13.68□□□□□ -0.22
Scn8aQ9WTU3 Ecscr-204ENSMUST00000133064 1055 ntAPPRIS ALT2 TSL 2 BASIC13.68□□□□□ -0.22
Scn8aQ9WTU3 C030018K13Rik-202ENSMUST00000196829 712 ntTSL 3 BASIC13.68□□□□□ -0.22
Scn8aQ9WTU3 Gabarapl1-204ENSMUST00000204956 539 ntAPPRIS P1 TSL 3 BASIC13.68□□□□□ -0.22
Scn8aQ9WTU3 Gm18062-201ENSMUST00000208020 547 ntBASIC13.68□□□□□ -0.22
Scn8aQ9WTU3 Gm18055-201ENSMUST00000208254 547 ntBASIC13.68□□□□□ -0.22
Scn8aQ9WTU3 Gm34549-203ENSMUST00000208300 896 ntTSL 5 BASIC13.68□□□□□ -0.22
Scn8aQ9WTU3 Cyct-201ENSMUST00000028430 655 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Scn8aQ9WTU3 Fau-201ENSMUST00000043074 574 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Retrieved 100 of 76,532 protein–RNA pairs in 30.3 ms