Protein–RNA interactions for Protein: Q9ERP3

Trim54, Tripartite motif-containing protein 54, mousemouse

Predictions only

Length 366 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim54Q9ERP3 Gm12742-201ENSMUST00000117326 410 ntBASIC14.84□□□□□ -0.03
Trim54Q9ERP3 Gm12957-201ENSMUST00000117835 377 ntBASIC14.84□□□□□ -0.03
Trim54Q9ERP3 Gm26894-201ENSMUST00000180828 1134 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Trim54Q9ERP3 Gm38223-201ENSMUST00000194484 695 ntBASIC14.84□□□□□ -0.03
Trim54Q9ERP3 Gm38671-201ENSMUST00000200573 130 ntBASIC14.84□□□□□ -0.03
Trim54Q9ERP3 Rdh5-201ENSMUST00000026406 1258 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Trim54Q9ERP3 Ppp1r14d-201ENSMUST00000076084 787 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Trim54Q9ERP3 Gm10570-201ENSMUST00000097865 513 ntAPPRIS P1 BASIC14.84□□□□□ -0.03
Trim54Q9ERP3 Lrrc41-201ENSMUST00000030471 3065 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Trim54Q9ERP3 Samd4b-204ENSMUST00000208199 4391 ntAPPRIS P1 TSL 5 BASIC14.84□□□□□ -0.03
Trim54Q9ERP3 Npas3-204ENSMUST00000223358 3143 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Trim54Q9ERP3 Nkx6-1-201ENSMUST00000044125 3138 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Trim54Q9ERP3 Itgb3-201ENSMUST00000021028 5784 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Trim54Q9ERP3 Etfdh-201ENSMUST00000029386 2377 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Trim54Q9ERP3 Zfp839-201ENSMUST00000170060 3723 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Trim54Q9ERP3 Cchcr1-202ENSMUST00000164242 2656 ntAPPRIS P2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Trim54Q9ERP3 Dnajc28-201ENSMUST00000049244 1891 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Trim54Q9ERP3 Mfrp-205ENSMUST00000206308 4037 ntAPPRIS ALT2 TSL 5 BASIC14.84□□□□□ -0.03
Trim54Q9ERP3 Mtss1-201ENSMUST00000080371 4938 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Trim54Q9ERP3 Gm28496-202ENSMUST00000137742 2752 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Trim54Q9ERP3 Arhgap10-201ENSMUST00000076316 3084 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Trim54Q9ERP3 Tmed8-201ENSMUST00000037418 7409 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
Trim54Q9ERP3 Atf7-202ENSMUST00000108828 2887 ntTSL 1 (best) BASIC14.83□□□□□ -0.03
Trim54Q9ERP3 Slc25a21-201ENSMUST00000044634 2609 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.03
Trim54Q9ERP3 Col3a1-201ENSMUST00000087883 5564 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
Trim54Q9ERP3 Yif1a-201ENSMUST00000025811 1493 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
Trim54Q9ERP3 Tmem39a-214ENSMUST00000171687 2667 ntTSL 1 (best) BASIC14.83□□□□□ -0.03
Trim54Q9ERP3 Pth2r-201ENSMUST00000027083 2414 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Trim54Q9ERP3 Arhgef5-201ENSMUST00000031750 5469 ntAPPRIS P1 TSL 5 BASIC14.83□□□□□ -0.04
Trim54Q9ERP3 Hmbs-202ENSMUST00000097558 1534 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Trim54Q9ERP3 Nt5e-201ENSMUST00000034992 3995 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Trim54Q9ERP3 Gm14379-201ENSMUST00000128858 1878 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Trim54Q9ERP3 Edn3-201ENSMUST00000029030 3117 ntAPPRIS P2 TSL 1 (best) BASIC14.83□□□□□ -0.04
Trim54Q9ERP3 Ranbp3-201ENSMUST00000002445 2511 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Trim54Q9ERP3 Gm13226-201ENSMUST00000117838 404 ntBASIC14.83□□□□□ -0.04
Trim54Q9ERP3 Dpy30-202ENSMUST00000164832 799 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Trim54Q9ERP3 2610306M01Rik-201ENSMUST00000185414 1042 ntBASIC14.83□□□□□ -0.04
Trim54Q9ERP3 Gm29152-201ENSMUST00000189284 325 ntTSL 5 BASIC14.83□□□□□ -0.04
Trim54Q9ERP3 Atp6v0c-201ENSMUST00000024932 1183 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Trim54Q9ERP3 Lamtor2-201ENSMUST00000029698 668 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Trim54Q9ERP3 Cracr2a-201ENSMUST00000071563 1094 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Trim54Q9ERP3 Taf7l-201ENSMUST00000009740 1933 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Trim54Q9ERP3 Col5a1-201ENSMUST00000028280 8406 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Trim54Q9ERP3 Pld3-201ENSMUST00000117095 2282 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Trim54Q9ERP3 Hps5-201ENSMUST00000014562 4953 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.04
Trim54Q9ERP3 Hyou1-201ENSMUST00000066601 4432 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Trim54Q9ERP3 Repin1-204ENSMUST00000135151 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
Trim54Q9ERP3 Tspan32-206ENSMUST00000105925 1376 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Trim54Q9ERP3 Klk6-203ENSMUST00000107968 1394 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Trim54Q9ERP3 Thnsl2-202ENSMUST00000160918 2077 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Trim54Q9ERP3 Plekhb1-201ENSMUST00000079176 2079 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.04
Trim54Q9ERP3 Pgbd5-201ENSMUST00000052580 2824 ntAPPRIS P2 TSL 5 BASIC14.83□□□□□ -0.04
Trim54Q9ERP3 Pank4-201ENSMUST00000030931 2508 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Trim54Q9ERP3 Trp53bp2-201ENSMUST00000117245 4361 ntAPPRIS P1 TSL 5 BASIC14.83□□□□□ -0.04
Trim54Q9ERP3 Il17re-202ENSMUST00000058548 2940 ntAPPRIS P2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Trim54Q9ERP3 Haus8-202ENSMUST00000110071 1452 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
Trim54Q9ERP3 R3hcc1-206ENSMUST00000216152 1467 ntAPPRIS P2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Trim54Q9ERP3 Elmod1-201ENSMUST00000048409 2605 ntAPPRIS P2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Trim54Q9ERP3 Kir3dl1-202ENSMUST00000113105 1544 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Trim54Q9ERP3 Fam76a-201ENSMUST00000030696 3053 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Trim54Q9ERP3 Gm38102-201ENSMUST00000192791 1935 ntBASIC14.82□□□□□ -0.04
Trim54Q9ERP3 Cchcr1-201ENSMUST00000045956 2748 ntAPPRIS P2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Trim54Q9ERP3 Tagap1-201ENSMUST00000063683 2358 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Trim54Q9ERP3 Il1r1-202ENSMUST00000114795 4832 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Trim54Q9ERP3 Cdk2-202ENSMUST00000026416 2406 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Trim54Q9ERP3 Gm12280-201ENSMUST00000155836 1624 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Trim54Q9ERP3 Pear1-205ENSMUST00000172621 4490 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Trim54Q9ERP3 Papd5-201ENSMUST00000066748 4489 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Trim54Q9ERP3 Syngr1-201ENSMUST00000009727 4180 ntAPPRIS P4 TSL 1 (best) BASIC14.82□□□□□ -0.04
Trim54Q9ERP3 Fbxl4-201ENSMUST00000039234 2546 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Trim54Q9ERP3 Lims1-203ENSMUST00000105468 1205 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Trim54Q9ERP3 Far2os1-201ENSMUST00000162391 555 ntTSL 2 BASIC14.82□□□□□ -0.04
Trim54Q9ERP3 Gm8584-201ENSMUST00000171982 758 ntBASIC14.82□□□□□ -0.04
Trim54Q9ERP3 C430014B12Rik-201ENSMUST00000181720 1001 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Trim54Q9ERP3 Gm44397-201ENSMUST00000195950 113 ntBASIC14.82□□□□□ -0.04
Trim54Q9ERP3 AC153144.2-201ENSMUST00000221766 451 ntTSL 5 BASIC14.82□□□□□ -0.04
Trim54Q9ERP3 Lpcat1-208ENSMUST00000223060 2141 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Trim54Q9ERP3 Csrp3-201ENSMUST00000032658 877 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Trim54Q9ERP3 Selenon-201ENSMUST00000060435 3445 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
Trim54Q9ERP3 Gm5478-201ENSMUST00000100184 2566 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
Trim54Q9ERP3 A330035P11Rik-202ENSMUST00000144926 3074 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Trim54Q9ERP3 Emd-202ENSMUST00000088313 1338 ntTSL 2 BASIC14.82□□□□□ -0.04
Trim54Q9ERP3 Kctd14-205ENSMUST00000206279 2203 ntAPPRIS ALT2 TSL 2 BASIC14.82□□□□□ -0.04
Trim54Q9ERP3 Lipo3-201ENSMUST00000025694 2768 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Trim54Q9ERP3 P4hb-201ENSMUST00000026122 2861 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Trim54Q9ERP3 Smarce1-201ENSMUST00000103133 2919 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Trim54Q9ERP3 Sgo2a-201ENSMUST00000027202 4939 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Trim54Q9ERP3 St6gal2-202ENSMUST00000086878 2606 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Trim54Q9ERP3 Drd5-201ENSMUST00000041646 3152 ntAPPRIS P1 BASIC14.81□□□□□ -0.04
Trim54Q9ERP3 Decr2-201ENSMUST00000040907 2187 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Trim54Q9ERP3 Eaf1-201ENSMUST00000022446 4918 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Trim54Q9ERP3 Ifi47-204ENSMUST00000213728 1678 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
Trim54Q9ERP3 Tbrg4-201ENSMUST00000000394 2290 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Trim54Q9ERP3 Sh2d5-202ENSMUST00000105824 3512 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Trim54Q9ERP3 Setd1b-204ENSMUST00000163030 8857 ntAPPRIS P2 TSL 5 BASIC14.81□□□□□ -0.04
Trim54Q9ERP3 Gm13185-201ENSMUST00000131044 944 ntTSL 3 BASIC14.81□□□□□ -0.04
Trim54Q9ERP3 Ptgr2-205ENSMUST00000135001 1286 ntTSL 5 BASIC14.81□□□□□ -0.04
Trim54Q9ERP3 Shisa5-203ENSMUST00000154184 1038 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Trim54Q9ERP3 Gm20753-201ENSMUST00000190105 545 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Trim54Q9ERP3 Crip2-202ENSMUST00000196015 772 ntTSL 3 BASIC14.81□□□□□ -0.04
Retrieved 100 of 76,532 protein–RNA pairs in 25.4 ms