Protein–RNA interactions for Protein: Q9D5U5

Pudp, Pseudouridine-5'-phosphatase, mousemouse

Predictions only

Length 234 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PudpQ9D5U5 Pgghg-204ENSMUST00000164580 3001 ntAPPRIS ALT2 TSL 5 BASIC13.3□□□□□ -0.28
PudpQ9D5U5 Ehd1-201ENSMUST00000025684 3353 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
PudpQ9D5U5 Shc1-203ENSMUST00000107417 3079 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
PudpQ9D5U5 Vangl1-201ENSMUST00000029453 6531 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
PudpQ9D5U5 Cbs-203ENSMUST00000118504 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
PudpQ9D5U5 Nek6-203ENSMUST00000112902 3147 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
PudpQ9D5U5 Corin-201ENSMUST00000005352 4862 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
PudpQ9D5U5 Fbxl19-202ENSMUST00000186116 3641 ntTSL 5 BASIC13.3□□□□□ -0.28
PudpQ9D5U5 Tspan9-202ENSMUST00000112171 2584 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
PudpQ9D5U5 Ankrd6-204ENSMUST00000084750 4444 ntAPPRIS P2 TSL 5 BASIC13.29□□□□□ -0.28
PudpQ9D5U5 Grip1-202ENSMUST00000077871 3720 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
PudpQ9D5U5 Xylb-201ENSMUST00000039610 3383 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
PudpQ9D5U5 Hnrnpul1-201ENSMUST00000043765 3354 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
PudpQ9D5U5 Slc22a15-201ENSMUST00000106928 6573 ntAPPRIS P1 TSL 5 BASIC13.29□□□□□ -0.28
PudpQ9D5U5 Pcdhac1-201ENSMUST00000007584 5419 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
PudpQ9D5U5 Sema6d-206ENSMUST00000103239 6225 ntAPPRIS P4 TSL 5 BASIC13.29□□□□□ -0.28
PudpQ9D5U5 Gm16685-201ENSMUST00000181286 1592 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
PudpQ9D5U5 Zbtb14-201ENSMUST00000062369 3625 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
PudpQ9D5U5 Snai3-201ENSMUST00000006762 1628 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
PudpQ9D5U5 Edc3-201ENSMUST00000043990 5708 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
PudpQ9D5U5 Il13ra1-201ENSMUST00000033418 3712 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
PudpQ9D5U5 Mir449b-201ENSMUST00000104833 80 ntBASIC13.29□□□□□ -0.28
PudpQ9D5U5 Gm13616-201ENSMUST00000120600 222 ntBASIC13.29□□□□□ -0.28
PudpQ9D5U5 Dph3-205ENSMUST00000124303 809 ntTSL 2 BASIC13.29□□□□□ -0.28
PudpQ9D5U5 Hoxa7-202ENSMUST00000134367 807 ntTSL 5 BASIC13.29□□□□□ -0.28
PudpQ9D5U5 2810408I11Rik-202ENSMUST00000150749 711 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
PudpQ9D5U5 Gm9824-201ENSMUST00000178707 561 ntBASIC13.29□□□□□ -0.28
PudpQ9D5U5 4930573H18Rik-201ENSMUST00000197696 906 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
PudpQ9D5U5 Sin3a-208ENSMUST00000168678 5206 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
PudpQ9D5U5 Fgf17-202ENSMUST00000227123 1336 ntBASIC13.29□□□□□ -0.28
PudpQ9D5U5 Zfyve28-201ENSMUST00000094868 3983 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
PudpQ9D5U5 Aldh16a1-201ENSMUST00000107815 2685 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
PudpQ9D5U5 Cmpk1-201ENSMUST00000030491 3170 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
PudpQ9D5U5 Egfl7-212ENSMUST00000166920 1391 ntAPPRIS P4 TSL 1 (best) BASIC13.29□□□□□ -0.28
PudpQ9D5U5 Ptk2-201ENSMUST00000110036 4184 ntAPPRIS P2 TSL 1 (best) BASIC13.29□□□□□ -0.28
PudpQ9D5U5 1600002D24Rik-202ENSMUST00000136744 1854 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
PudpQ9D5U5 Lmln-201ENSMUST00000023497 6147 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
PudpQ9D5U5 Gm16845-201ENSMUST00000180419 1415 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
PudpQ9D5U5 Emc3-201ENSMUST00000032425 1985 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
PudpQ9D5U5 Tcf4-210ENSMUST00000128706 2066 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
PudpQ9D5U5 Mbl1-202ENSMUST00000225792 1563 ntAPPRIS P1 BASIC13.28□□□□□ -0.28
PudpQ9D5U5 A3galt2-202ENSMUST00000106077 2114 ntAPPRIS ALT2 TSL 5 BASIC13.28□□□□□ -0.28
PudpQ9D5U5 Gm43156-201ENSMUST00000202338 2127 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
PudpQ9D5U5 4930556H04Rik-201ENSMUST00000222451 1675 ntBASIC13.28□□□□□ -0.28
PudpQ9D5U5 Atg7-207ENSMUST00000182428 2264 ntAPPRIS ALT2 TSL 5 BASIC13.28□□□□□ -0.28
PudpQ9D5U5 Kcnj8-201ENSMUST00000032374 2269 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
PudpQ9D5U5 Rnf14-202ENSMUST00000170811 2886 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
PudpQ9D5U5 Pnkd-201ENSMUST00000027370 2937 ntAPPRIS P2 TSL 1 (best) BASIC13.28□□□□□ -0.28
PudpQ9D5U5 B130055M24Rik-201ENSMUST00000144796 1778 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
PudpQ9D5U5 Cacna1g-208ENSMUST00000107790 8035 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
PudpQ9D5U5 Tnfrsf13b-202ENSMUST00000101103 750 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
PudpQ9D5U5 Lamtor2-202ENSMUST00000119002 568 ntTSL 2 BASIC13.28□□□□□ -0.28
PudpQ9D5U5 Tex30-206ENSMUST00000133677 935 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
PudpQ9D5U5 Gm5479-201ENSMUST00000160578 435 ntBASIC13.28□□□□□ -0.28
PudpQ9D5U5 Hsf4-207ENSMUST00000174837 1251 ntTSL 5 BASIC13.28□□□□□ -0.28
PudpQ9D5U5 1700086L19Rik-202ENSMUST00000185822 1028 ntTSL 3 BASIC13.28□□□□□ -0.28
PudpQ9D5U5 Gm45098-201ENSMUST00000207179 657 ntBASIC13.28□□□□□ -0.28
PudpQ9D5U5 Rps10-201ENSMUST00000025052 519 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
PudpQ9D5U5 Tmod4-201ENSMUST00000005769 1242 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
PudpQ9D5U5 2610318N02Rik-201ENSMUST00000093336 1265 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
PudpQ9D5U5 Olfr71-202ENSMUST00000107862 2587 ntAPPRIS P1 TSL 3 BASIC13.28□□□□□ -0.28
PudpQ9D5U5 Kmt2e-201ENSMUST00000094962 7252 ntAPPRIS P1 TSL 5 BASIC13.28□□□□□ -0.28
PudpQ9D5U5 F2r-201ENSMUST00000059193 3336 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
PudpQ9D5U5 Foxi2-201ENSMUST00000060356 2657 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
PudpQ9D5U5 Ccdc88c-201ENSMUST00000068411 7542 ntAPPRIS P2 TSL 1 (best) BASIC13.28□□□□□ -0.28
PudpQ9D5U5 Nr4a2-203ENSMUST00000112629 3422 ntAPPRIS P1 TSL 5 BASIC13.28□□□□□ -0.28
PudpQ9D5U5 Tmed1-201ENSMUST00000034698 1378 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
PudpQ9D5U5 Slc35e2-202ENSMUST00000105608 6291 ntAPPRIS P1 TSL 5 BASIC13.28□□□□□ -0.28
PudpQ9D5U5 Il20ra-201ENSMUST00000020185 2105 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
PudpQ9D5U5 Eef1d-204ENSMUST00000089681 2152 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
PudpQ9D5U5 Myog-201ENSMUST00000027730 1495 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
PudpQ9D5U5 Srp72-202ENSMUST00000120550 2297 ntAPPRIS ALT2 TSL 5 BASIC13.28□□□□□ -0.28
PudpQ9D5U5 Tmem215-202ENSMUST00000179526 2276 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
PudpQ9D5U5 Trappc2-203ENSMUST00000116495 1613 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
PudpQ9D5U5 Noto-201ENSMUST00000089578 1602 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
PudpQ9D5U5 Cdk8-205ENSMUST00000161181 2467 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
PudpQ9D5U5 Klhl18-201ENSMUST00000068025 4530 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
PudpQ9D5U5 Gm37861-201ENSMUST00000193534 2869 ntBASIC13.27□□□□□ -0.28
PudpQ9D5U5 Cox16-201ENSMUST00000002757 2007 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
PudpQ9D5U5 Ropn1l-201ENSMUST00000110408 957 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
PudpQ9D5U5 Abhd11-202ENSMUST00000111216 972 ntTSL 3 BASIC13.27□□□□□ -0.29
PudpQ9D5U5 Atf7ip2-203ENSMUST00000117220 1230 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
PudpQ9D5U5 Gm15920-201ENSMUST00000118998 402 ntBASIC13.27□□□□□ -0.29
PudpQ9D5U5 Tpt1-ps6-201ENSMUST00000121768 523 ntBASIC13.27□□□□□ -0.29
PudpQ9D5U5 Zfp715-201ENSMUST00000012796 907 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
PudpQ9D5U5 Hpca-207ENSMUST00000139450 812 ntAPPRIS P1 TSL 3 BASIC13.27□□□□□ -0.29
PudpQ9D5U5 Gm11682-201ENSMUST00000144689 516 ntTSL 3 BASIC13.27□□□□□ -0.29
PudpQ9D5U5 Hmga2-203ENSMUST00000159699 3810 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
PudpQ9D5U5 Tmem33-206ENSMUST00000162543 664 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
PudpQ9D5U5 Gm25948-201ENSMUST00000175334 112 ntBASIC13.27□□□□□ -0.29
PudpQ9D5U5 Ighv8-7-201ENSMUST00000194349 297 ntBASIC13.27□□□□□ -0.29
PudpQ9D5U5 4933437G19Rik-201ENSMUST00000197910 1178 ntBASIC13.27□□□□□ -0.29
PudpQ9D5U5 4930593A02Rik-202ENSMUST00000203879 938 ntTSL 5 BASIC13.27□□□□□ -0.29
PudpQ9D5U5 Plpp4-203ENSMUST00000205896 714 ntTSL 5 BASIC13.27□□□□□ -0.29
PudpQ9D5U5 Renbp-201ENSMUST00000114379 1318 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
PudpQ9D5U5 4930513N10Rik-204ENSMUST00000212647 3957 ntBASIC13.27□□□□□ -0.29
PudpQ9D5U5 Ebf4-201ENSMUST00000110286 2670 ntAPPRIS P2 TSL 1 (best) BASIC13.27□□□□□ -0.29
PudpQ9D5U5 Rab3a-202ENSMUST00000110090 1375 ntAPPRIS P1 TSL 3 BASIC13.27□□□□□ -0.29
PudpQ9D5U5 Chd7-201ENSMUST00000039267 9444 ntAPPRIS P1 TSL 5 BASIC13.27□□□□□ -0.29
PudpQ9D5U5 Disp2-204ENSMUST00000110846 1732 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Retrieved 100 of 76,532 protein–RNA pairs in 61 ms