Protein–RNA interactions for Protein: Q9D0E3

Lysmd1, LysM and putative peptidoglycan-binding domain-containing protein 1, mousemouse

Predictions only

Length 226 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lysmd1Q9D0E3 Smarcb1-201ENSMUST00000000925 1660 ntAPPRIS P3 TSL 1 (best) BASIC14.48□□□□□ -0.09
Lysmd1Q9D0E3 Trim8-201ENSMUST00000026008 3230 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Lysmd1Q9D0E3 4930429P21Rik-202ENSMUST00000194547 2061 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Lysmd1Q9D0E3 Taok3-203ENSMUST00000111978 4467 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Lysmd1Q9D0E3 Trim15-201ENSMUST00000025329 1843 ntAPPRIS P3 TSL 1 (best) BASIC14.48□□□□□ -0.09
Lysmd1Q9D0E3 Msl1-201ENSMUST00000037915 4593 ntAPPRIS P2 TSL 1 (best) BASIC14.48□□□□□ -0.09
Lysmd1Q9D0E3 Tcf3-204ENSMUST00000105340 2826 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Lysmd1Q9D0E3 Rab27b-202ENSMUST00000117692 2842 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Lysmd1Q9D0E3 Col13a1-203ENSMUST00000105452 3037 ntAPPRIS ALT2 TSL 5 BASIC14.47□□□□□ -0.09
Lysmd1Q9D0E3 Odf2-208ENSMUST00000113763 2364 ntAPPRIS P3 TSL 5 BASIC14.47□□□□□ -0.09
Lysmd1Q9D0E3 Gm43399-201ENSMUST00000202546 2374 ntBASIC14.47□□□□□ -0.09
Lysmd1Q9D0E3 Zkscan3-201ENSMUST00000070785 2561 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Lysmd1Q9D0E3 Mta1-203ENSMUST00000109723 2790 ntAPPRIS ALT2 TSL 5 BASIC14.47□□□□□ -0.09
Lysmd1Q9D0E3 Mta1-204ENSMUST00000109726 2775 ntAPPRIS P3 TSL 1 (best) BASIC14.47□□□□□ -0.09
Lysmd1Q9D0E3 Mta1-205ENSMUST00000109727 2789 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Lysmd1Q9D0E3 Tubb2a-ps2-201ENSMUST00000221547 1339 ntBASIC14.47□□□□□ -0.09
Lysmd1Q9D0E3 0610040F04Rik-201ENSMUST00000137478 1734 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Lysmd1Q9D0E3 Rps3-201ENSMUST00000032998 1908 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Lysmd1Q9D0E3 Ctsd-202ENSMUST00000151120 2127 ntAPPRIS P2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Lysmd1Q9D0E3 Ruvbl2-205ENSMUST00000211214 2312 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Lysmd1Q9D0E3 Nfe2l3-201ENSMUST00000005103 2544 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Lysmd1Q9D0E3 Atp1a1-201ENSMUST00000036493 3679 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Lysmd1Q9D0E3 Trp53-206ENSMUST00000171247 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Lysmd1Q9D0E3 Kansl2-ps-201ENSMUST00000181818 1461 ntBASIC14.47□□□□□ -0.09
Lysmd1Q9D0E3 Ifna15-201ENSMUST00000102809 573 ntAPPRIS P1 BASIC14.47□□□□□ -0.09
Lysmd1Q9D0E3 4930595D18Rik-201ENSMUST00000121608 818 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Lysmd1Q9D0E3 E130307A14Rik-203ENSMUST00000136862 608 ntTSL 3 BASIC14.47□□□□□ -0.09
Lysmd1Q9D0E3 Rps28-203ENSMUST00000173019 437 ntAPPRIS P1 TSL 3 BASIC14.47□□□□□ -0.09
Lysmd1Q9D0E3 Cacng1-201ENSMUST00000021065 1249 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Lysmd1Q9D0E3 Gm6145-204ENSMUST00000210902 1266 ntTSL 5 BASIC14.47□□□□□ -0.09
Lysmd1Q9D0E3 Gm29676-202ENSMUST00000222409 364 ntTSL 2 BASIC14.47□□□□□ -0.09
Lysmd1Q9D0E3 AC154290.1-201ENSMUST00000223786 1240 ntBASIC14.47□□□□□ -0.09
Lysmd1Q9D0E3 Tff1-201ENSMUST00000024831 478 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Lysmd1Q9D0E3 S100a8-201ENSMUST00000069927 486 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Lysmd1Q9D0E3 Mkrn1-201ENSMUST00000031985 3046 ntAPPRIS P3 TSL 1 (best) BASIC14.47□□□□□ -0.09
Lysmd1Q9D0E3 Atp6v1h-204ENSMUST00000192698 1811 ntTSL 5 BASIC14.47□□□□□ -0.09
Lysmd1Q9D0E3 Fam120c-201ENSMUST00000073364 5463 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Lysmd1Q9D0E3 Synpo-206ENSMUST00000130360 5159 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Lysmd1Q9D0E3 Ramp1-201ENSMUST00000097648 2325 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Lysmd1Q9D0E3 Plekhh3-206ENSMUST00000164474 3010 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Lysmd1Q9D0E3 Pex3-207ENSMUST00000170376 1381 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Lysmd1Q9D0E3 Trmt6-201ENSMUST00000039554 2828 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Lysmd1Q9D0E3 Scin-201ENSMUST00000002640 2995 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Lysmd1Q9D0E3 Emc8-201ENSMUST00000034277 4942 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Lysmd1Q9D0E3 Myo3b-202ENSMUST00000112241 1319 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Lysmd1Q9D0E3 Ephb1-201ENSMUST00000035129 4667 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Lysmd1Q9D0E3 Dnajb11-204ENSMUST00000166487 2534 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Lysmd1Q9D0E3 Trim50-202ENSMUST00000111180 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
Lysmd1Q9D0E3 Rfx7-203ENSMUST00000183372 1457 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Lysmd1Q9D0E3 Wdr13-205ENSMUST00000130832 4374 ntTSL 5 BASIC14.46□□□□□ -0.09
Lysmd1Q9D0E3 Rffl-205ENSMUST00000103218 1264 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Lysmd1Q9D0E3 Ighv5-4-201ENSMUST00000103444 425 ntAPPRIS P1 BASIC14.46□□□□□ -0.09
Lysmd1Q9D0E3 Naf1-201ENSMUST00000118009 2990 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Lysmd1Q9D0E3 Gm7541-201ENSMUST00000118361 535 ntBASIC14.46□□□□□ -0.09
Lysmd1Q9D0E3 5730437C11Rik-201ENSMUST00000155540 242 ntTSL 5 BASIC14.46□□□□□ -0.09
Lysmd1Q9D0E3 Gm17208-201ENSMUST00000168388 535 ntBASIC14.46□□□□□ -0.09
Lysmd1Q9D0E3 CT030637.1-201ENSMUST00000228016 669 ntBASIC14.46□□□□□ -0.09
Lysmd1Q9D0E3 Dhrs2-201ENSMUST00000022820 1268 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Lysmd1Q9D0E3 Cyp11a1-201ENSMUST00000034874 2120 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Lysmd1Q9D0E3 Gm11938-201ENSMUST00000072306 663 ntAPPRIS P1 BASIC14.46□□□□□ -0.09
Lysmd1Q9D0E3 Olfr142-201ENSMUST00000099752 918 ntAPPRIS P1 BASIC14.46□□□□□ -0.09
Lysmd1Q9D0E3 Prrt3-205ENSMUST00000205170 1903 ntAPPRIS ALT2 TSL 2 BASIC14.46□□□□□ -0.09
Lysmd1Q9D0E3 Lrriq4-201ENSMUST00000108265 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
Lysmd1Q9D0E3 Dnpep-202ENSMUST00000113605 1571 ntAPPRIS P3 TSL 1 (best) BASIC14.46□□□□□ -0.09
Lysmd1Q9D0E3 Pnpt1-201ENSMUST00000020756 2707 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Lysmd1Q9D0E3 B3gnt5-202ENSMUST00000119468 2229 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
Lysmd1Q9D0E3 Sh2b1-201ENSMUST00000032978 3393 ntAPPRIS P3 TSL 1 (best) BASIC14.46□□□□□ -0.1
Lysmd1Q9D0E3 4931428F04Rik-203ENSMUST00000212219 2044 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
Lysmd1Q9D0E3 Rpl5-201ENSMUST00000082223 2045 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
Lysmd1Q9D0E3 Gsdmcl-ps-203ENSMUST00000188367 1375 ntBASIC14.46□□□□□ -0.1
Lysmd1Q9D0E3 Smim10l1-201ENSMUST00000100864 2842 ntAPPRIS P1 BASIC14.46□□□□□ -0.1
Lysmd1Q9D0E3 Gm14371-201ENSMUST00000138925 1518 ntBASIC14.46□□□□□ -0.1
Lysmd1Q9D0E3 Eif2ak3-201ENSMUST00000034093 4513 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Lysmd1Q9D0E3 Cuedc2-201ENSMUST00000051234 1833 ntAPPRIS P1 TSL 5 BASIC14.45□□□□□ -0.1
Lysmd1Q9D0E3 Cdc14b-203ENSMUST00000109770 3052 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
Lysmd1Q9D0E3 Ccdc94-201ENSMUST00000086869 1311 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Lysmd1Q9D0E3 P2rx4-201ENSMUST00000031429 2702 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Lysmd1Q9D0E3 Ogfrl1-201ENSMUST00000027343 4844 ntAPPRIS P1 TSL 3 BASIC14.45□□□□□ -0.1
Lysmd1Q9D0E3 Apoa5-202ENSMUST00000121598 2515 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Lysmd1Q9D0E3 Arhgef10l-201ENSMUST00000039204 4493 ntAPPRIS P4 TSL 1 (best) BASIC14.45□□□□□ -0.1
Lysmd1Q9D0E3 Nadk2-203ENSMUST00000100790 3665 ntAPPRIS ALT2 TSL 5 BASIC14.45□□□□□ -0.1
Lysmd1Q9D0E3 Tm2d3-203ENSMUST00000107495 1003 ntAPPRIS P4 TSL 5 BASIC14.45□□□□□ -0.1
Lysmd1Q9D0E3 Rabggtb-202ENSMUST00000167111 1418 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Lysmd1Q9D0E3 Gm20457-201ENSMUST00000173374 682 ntTSL 3 BASIC14.45□□□□□ -0.1
Lysmd1Q9D0E3 Gm45338-204ENSMUST00000210658 1105 ntTSL 5 BASIC14.45□□□□□ -0.1
Lysmd1Q9D0E3 Mt1-202ENSMUST00000211807 1085 ntBASIC14.45□□□□□ -0.1
Lysmd1Q9D0E3 AC125206.1-201ENSMUST00000214070 739 ntTSL 5 BASIC14.45□□□□□ -0.1
Lysmd1Q9D0E3 AC113031.8-201ENSMUST00000227856 631 ntBASIC14.45□□□□□ -0.1
Lysmd1Q9D0E3 Jhy-201ENSMUST00000034521 3074 ntAPPRIS P1 TSL 5 BASIC14.45□□□□□ -0.1
Lysmd1Q9D0E3 Asic3-201ENSMUST00000049346 1853 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Lysmd1Q9D0E3 Tspyl2-201ENSMUST00000044509 2696 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Lysmd1Q9D0E3 Ldlrap1-201ENSMUST00000037828 6549 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Lysmd1Q9D0E3 Atat1-201ENSMUST00000056034 1930 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
Lysmd1Q9D0E3 Fam83g-202ENSMUST00000093019 4778 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Lysmd1Q9D0E3 Adgrl1-201ENSMUST00000045393 5643 ntAPPRIS P1 TSL 5 BASIC14.45□□□□□ -0.1
Lysmd1Q9D0E3 6330537M06Rik-201ENSMUST00000212384 1642 ntBASIC14.44□□□□□ -0.1
Lysmd1Q9D0E3 Mettl17-201ENSMUST00000047899 1623 ntAPPRIS P2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Lysmd1Q9D0E3 Uso1-201ENSMUST00000031355 3898 ntAPPRIS P2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Lysmd1Q9D0E3 Srsf5-202ENSMUST00000110351 1498 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Lysmd1Q9D0E3 Ccnc-204ENSMUST00000120679 1453 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Retrieved 100 of 76,532 protein–RNA pairs in 60.1 ms