Protein–RNA interactions for Protein: Q9CW03

Smc3, Structural maintenance of chromosomes protein 3, mousemouse

Known RBP Predictions only

Length 1,217 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smc3Q9CW03 Sema6c-202ENSMUST00000090823 4029 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Smc3Q9CW03 Gns-201ENSMUST00000040344 3855 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Smc3Q9CW03 Dusp6-201ENSMUST00000020118 2796 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Smc3Q9CW03 Arl6ip6-201ENSMUST00000028336 2548 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Smc3Q9CW03 Gorab-201ENSMUST00000045138 2538 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Smc3Q9CW03 Nptn-206ENSMUST00000176557 1898 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Smc3Q9CW03 Rasal3-201ENSMUST00000063824 3681 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.17
Smc3Q9CW03 Adat3-201ENSMUST00000178231 4516 ntAPPRIS P1 TSL 2 BASIC16.14■□□□□ 0.17
Smc3Q9CW03 Plk4-203ENSMUST00000203295 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Smc3Q9CW03 Mdm2-201ENSMUST00000020408 3099 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Smc3Q9CW03 Zfp977-201ENSMUST00000173283 1425 ntAPPRIS P1 TSL 2 BASIC16.14■□□□□ 0.17
Smc3Q9CW03 Bscl2-206ENSMUST00000160556 1795 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Smc3Q9CW03 Fam110b-209ENSMUST00000171403 1754 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Smc3Q9CW03 Sirt5-207ENSMUST00000221515 1793 ntTSL 5 BASIC16.14■□□□□ 0.17
Smc3Q9CW03 Gm24543-201ENSMUST00000103867 82 ntBASIC16.14■□□□□ 0.17
Smc3Q9CW03 Cnn2-202ENSMUST00000105374 926 ntTSL 5 BASIC16.14■□□□□ 0.17
Smc3Q9CW03 Crybb3-204ENSMUST00000119627 828 ntAPPRIS P1 TSL 2 BASIC16.14■□□□□ 0.17
Smc3Q9CW03 Tmem219-202ENSMUST00000119781 1118 ntTSL 5 BASIC16.14■□□□□ 0.17
Smc3Q9CW03 Gm12428-201ENSMUST00000119844 727 ntBASIC16.14■□□□□ 0.17
Smc3Q9CW03 Tmem219-204ENSMUST00000121532 915 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Smc3Q9CW03 Gm11594-201ENSMUST00000122313 162 ntBASIC16.14■□□□□ 0.17
Smc3Q9CW03 Bcl2l2-204ENSMUST00000172844 498 ntTSL 5 BASIC16.14■□□□□ 0.17
Smc3Q9CW03 Hsf4-207ENSMUST00000174837 1251 ntTSL 5 BASIC16.14■□□□□ 0.17
Smc3Q9CW03 Gm43514-201ENSMUST00000198852 424 ntBASIC16.14■□□□□ 0.17
Smc3Q9CW03 Gm6566-201ENSMUST00000221468 1171 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Smc3Q9CW03 Sbk2-201ENSMUST00000032598 1139 ntAPPRIS P1 TSL 3 BASIC16.14■□□□□ 0.17
Smc3Q9CW03 Tmem219-201ENSMUST00000032926 941 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Smc3Q9CW03 Kcnip2-203ENSMUST00000086993 1005 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Smc3Q9CW03 Lsmem1-201ENSMUST00000095760 1213 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Smc3Q9CW03 Nup88-201ENSMUST00000035283 2450 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Smc3Q9CW03 Ly9-202ENSMUST00000068878 2488 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.17
Smc3Q9CW03 Hist1h2be-202ENSMUST00000091704 2480 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Smc3Q9CW03 Gtf2a1l-201ENSMUST00000024970 1621 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Smc3Q9CW03 Kars-203ENSMUST00000164470 2189 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Smc3Q9CW03 1810058I24Rik-203ENSMUST00000152147 2521 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Smc3Q9CW03 Parp16-202ENSMUST00000213396 2518 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Smc3Q9CW03 Rpl21-201ENSMUST00000035983 1856 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Smc3Q9CW03 Fbxo28-201ENSMUST00000051431 4925 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Smc3Q9CW03 Tbkbp1-201ENSMUST00000066078 3338 ntAPPRIS ALT2 TSL 5 BASIC16.14■□□□□ 0.17
Smc3Q9CW03 Slc12a8-202ENSMUST00000117134 2081 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Smc3Q9CW03 Cabp7-201ENSMUST00000009219 2628 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Smc3Q9CW03 Traf1-202ENSMUST00000113064 2325 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Smc3Q9CW03 Txn2-203ENSMUST00000109747 1778 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Smc3Q9CW03 Mettl11b-201ENSMUST00000159679 1790 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Smc3Q9CW03 Asb10-202ENSMUST00000117900 1432 ntTSL 5 BASIC16.13■□□□□ 0.17
Smc3Q9CW03 Edrf1-201ENSMUST00000051169 5424 ntAPPRIS P2 TSL 1 (best) BASIC16.13■□□□□ 0.17
Smc3Q9CW03 Tnk2-201ENSMUST00000115120 2794 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Smc3Q9CW03 Cacng3-201ENSMUST00000084615 2777 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Smc3Q9CW03 Kcnh7-202ENSMUST00000112452 2849 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Smc3Q9CW03 Gm15199-201ENSMUST00000129933 542 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Smc3Q9CW03 Gm11505-201ENSMUST00000130442 737 ntTSL 3 BASIC16.13■□□□□ 0.17
Smc3Q9CW03 Gm14617-202ENSMUST00000144208 607 ntTSL 3 BASIC16.13■□□□□ 0.17
Smc3Q9CW03 Cmc4-203ENSMUST00000149863 507 ntAPPRIS P1 TSL 3 BASIC16.13■□□□□ 0.17
Smc3Q9CW03 Gm13883-202ENSMUST00000151310 1156 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Smc3Q9CW03 Gm25925-201ENSMUST00000158314 306 ntBASIC16.13■□□□□ 0.17
Smc3Q9CW03 Ccdc24-209ENSMUST00000171052 891 ntAPPRIS P1 TSL 5 BASIC16.13■□□□□ 0.17
Smc3Q9CW03 Gm20650-201ENSMUST00000175690 198 ntTSL 3 BASIC16.13■□□□□ 0.17
Smc3Q9CW03 CT943659.1-201ENSMUST00000215459 326 ntBASIC16.13■□□□□ 0.17
Smc3Q9CW03 3110079O15Rik-201ENSMUST00000027476 478 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Smc3Q9CW03 1700019N19Rik-201ENSMUST00000028299 970 ntAPPRIS P2 TSL 1 (best) BASIC16.13■□□□□ 0.17
Smc3Q9CW03 Gnmt-201ENSMUST00000002846 1035 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Smc3Q9CW03 Klk5-201ENSMUST00000048444 1239 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Smc3Q9CW03 Cenpm-201ENSMUST00000089155 1109 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Smc3Q9CW03 Bbs5-201ENSMUST00000074963 1468 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Smc3Q9CW03 Cpxm2-201ENSMUST00000033149 3498 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Smc3Q9CW03 Clcn3-204ENSMUST00000110301 4099 ntAPPRIS ALT1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Smc3Q9CW03 Slc16a3-208ENSMUST00000168579 4335 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Smc3Q9CW03 Sfswap-201ENSMUST00000053737 3313 ntAPPRIS P1 TSL 5 BASIC16.13■□□□□ 0.17
Smc3Q9CW03 Bend7-201ENSMUST00000056914 2302 ntAPPRIS P3 TSL 1 (best) BASIC16.13■□□□□ 0.17
Smc3Q9CW03 Zfyve19-202ENSMUST00000102519 1505 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Smc3Q9CW03 Fam131b-202ENSMUST00000095974 3992 ntAPPRIS ALT1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Smc3Q9CW03 Acsl6-210ENSMUST00000108905 5807 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Smc3Q9CW03 Sall3-201ENSMUST00000057950 6886 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Smc3Q9CW03 Gm26777-201ENSMUST00000181852 2573 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Smc3Q9CW03 Higd1a-205ENSMUST00000215007 1980 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Smc3Q9CW03 Nat8f6-202ENSMUST00000174143 1571 ntAPPRIS P1 TSL 3 BASIC16.13■□□□□ 0.17
Smc3Q9CW03 Fmn2-201ENSMUST00000030039 6442 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Smc3Q9CW03 Tbc1d1-201ENSMUST00000043893 6471 ntAPPRIS ALT2 TSL 2 BASIC16.13■□□□□ 0.17
Smc3Q9CW03 Pcdha11-203ENSMUST00000192447 4583 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
Smc3Q9CW03 Arhgef1-202ENSMUST00000098683 3375 ntAPPRIS P4 TSL 1 (best) BASIC16.12■□□□□ 0.17
Smc3Q9CW03 Sirt3-202ENSMUST00000106048 1416 ntAPPRIS P2 TSL 1 (best) BASIC16.12■□□□□ 0.17
Smc3Q9CW03 Angel2-203ENSMUST00000110899 3673 ntTSL 5 BASIC16.12■□□□□ 0.17
Smc3Q9CW03 Mark2-201ENSMUST00000025921 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
Smc3Q9CW03 Spg7-202ENSMUST00000125975 2408 ntAPPRIS ALT2 TSL 5 BASIC16.12■□□□□ 0.17
Smc3Q9CW03 Erdr1-204ENSMUST00000179483 688 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Smc3Q9CW03 Gm33320-201ENSMUST00000192232 530 ntBASIC16.12■□□□□ 0.17
Smc3Q9CW03 Ighv1-51-201ENSMUST00000192903 354 ntBASIC16.12■□□□□ 0.17
Smc3Q9CW03 Olfm1-202ENSMUST00000100244 2686 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Smc3Q9CW03 Syngap1-201ENSMUST00000081285 4315 ntAPPRIS ALT2 TSL 5 BASIC16.12■□□□□ 0.17
Smc3Q9CW03 Mthfsd-202ENSMUST00000116415 1520 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
Smc3Q9CW03 Lca5-202ENSMUST00000034793 2001 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
Smc3Q9CW03 Ephx2-201ENSMUST00000070515 2035 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Smc3Q9CW03 Miat-205ENSMUST00000182953 9163 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Smc3Q9CW03 Slc11a2-201ENSMUST00000023774 3025 ntAPPRIS P3 TSL 1 (best) BASIC16.12■□□□□ 0.17
Smc3Q9CW03 Ubap2l-204ENSMUST00000195995 3516 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Smc3Q9CW03 Gpr19-204ENSMUST00000116515 2075 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Smc3Q9CW03 5330406M23Rik-201ENSMUST00000195672 2094 ntBASIC16.12■□□□□ 0.17
Smc3Q9CW03 Slc6a21-206ENSMUST00000210861 2838 ntAPPRIS P1 TSL 5 BASIC16.12■□□□□ 0.17
Smc3Q9CW03 Abhd3-202ENSMUST00000117726 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
Smc3Q9CW03 Rlbp1-201ENSMUST00000053718 2134 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Retrieved 100 of 76,532 protein–RNA pairs in 36.4 ms