Protein–RNA interactions for Protein: Q9CQD0

Rpl39l, RIKEN cDNA 4930517K11, mousemouse

Predictions only

Length 51 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpl39lQ9CQD0 Olfr571-201ENSMUST00000061738 969 ntAPPRIS P1 BASIC8.91□□□□□ -0.98
Rpl39lQ9CQD0 Serf2-201ENSMUST00000099475 525 ntTSL 2 BASIC8.91□□□□□ -0.98
Rpl39lQ9CQD0 Ddah1-201ENSMUST00000029845 3764 ntAPPRIS P1 TSL 1 (best) BASIC8.91□□□□□ -0.98
Rpl39lQ9CQD0 Nrf1-211ENSMUST00000115212 3584 ntTSL 1 (best) BASIC8.91□□□□□ -0.98
Rpl39lQ9CQD0 F2-202ENSMUST00000111335 1969 ntAPPRIS ALT2 TSL 5 BASIC8.91□□□□□ -0.98
Rpl39lQ9CQD0 Klhl3-202ENSMUST00000160860 7149 ntAPPRIS P1 TSL 5 BASIC8.91□□□□□ -0.98
Rpl39lQ9CQD0 Abcc10-201ENSMUST00000047970 4885 ntAPPRIS ALT2 TSL 1 (best) BASIC8.91□□□□□ -0.98
Rpl39lQ9CQD0 Csrnp2-201ENSMUST00000061457 4126 ntAPPRIS P1 TSL 1 (best) BASIC8.91□□□□□ -0.98
Rpl39lQ9CQD0 Kank4-201ENSMUST00000102790 4795 ntAPPRIS P1 TSL 1 (best) BASIC8.91□□□□□ -0.98
Rpl39lQ9CQD0 Fermt2-201ENSMUST00000045905 3293 ntAPPRIS P1 TSL 1 (best) BASIC8.91□□□□□ -0.98
Rpl39lQ9CQD0 Egfem1-201ENSMUST00000118531 1779 ntAPPRIS ALT2 TSL 1 (best) BASIC8.91□□□□□ -0.98
Rpl39lQ9CQD0 Slc25a14-201ENSMUST00000033431 1760 ntAPPRIS P3 TSL 1 (best) BASIC8.91□□□□□ -0.98
Rpl39lQ9CQD0 2610028D06Rik-201ENSMUST00000215216 1713 ntBASIC8.91□□□□□ -0.98
Rpl39lQ9CQD0 Gm13814-201ENSMUST00000141341 3077 ntTSL 1 (best) BASIC8.91□□□□□ -0.98
Rpl39lQ9CQD0 Alx1-208ENSMUST00000219194 1695 ntAPPRIS P1 TSL 5 BASIC8.91□□□□□ -0.98
Rpl39lQ9CQD0 Armcx1-201ENSMUST00000035748 2303 ntAPPRIS P1 TSL 1 (best) BASIC8.91□□□□□ -0.98
Rpl39lQ9CQD0 Sectm1b-201ENSMUST00000039309 2287 ntAPPRIS P1 TSL 1 (best) BASIC8.91□□□□□ -0.98
Rpl39lQ9CQD0 Klc2-202ENSMUST00000113727 2874 ntTSL 5 BASIC8.91□□□□□ -0.98
Rpl39lQ9CQD0 Gm5939-201ENSMUST00000119613 2874 ntBASIC8.91□□□□□ -0.98
Rpl39lQ9CQD0 Bdnf-205ENSMUST00000111045 3973 ntAPPRIS P1 TSL 1 (best) BASIC8.9□□□□□ -0.98
Rpl39lQ9CQD0 Mycbpap-201ENSMUST00000040692 1512 ntTSL 1 (best) BASIC8.9□□□□□ -0.98
Rpl39lQ9CQD0 Ckmt1-202ENSMUST00000078222 1518 ntAPPRIS P1 TSL 1 (best) BASIC8.9□□□□□ -0.98
Rpl39lQ9CQD0 Fn1-214ENSMUST00000188894 8043 ntAPPRIS ALT2 TSL 1 (best) BASIC8.9□□□□□ -0.98
Rpl39lQ9CQD0 Specc1-213ENSMUST00000202179 6676 ntAPPRIS ALT2 TSL 1 (best) BASIC8.9□□□□□ -0.98
Rpl39lQ9CQD0 Gm26616-202ENSMUST00000195676 3107 ntBASIC8.9□□□□□ -0.98
Rpl39lQ9CQD0 Baiap3-202ENSMUST00000182056 4645 ntAPPRIS P2 TSL 1 (best) BASIC8.9□□□□□ -0.98
Rpl39lQ9CQD0 Gm26551-201ENSMUST00000181262 2432 ntTSL 5 BASIC8.9□□□□□ -0.98
Rpl39lQ9CQD0 Usp3-205ENSMUST00000127569 5607 ntAPPRIS P1 TSL 1 (best) BASIC8.9□□□□□ -0.98
Rpl39lQ9CQD0 Cog1-201ENSMUST00000018805 3935 ntAPPRIS P2 TSL 1 (best) BASIC8.9□□□□□ -0.98
Rpl39lQ9CQD0 Ttc5-201ENSMUST00000006451 1842 ntAPPRIS P1 TSL 1 (best) BASIC8.9□□□□□ -0.98
Rpl39lQ9CQD0 AC125108.1-201ENSMUST00000218986 2330 ntBASIC8.9□□□□□ -0.98
Rpl39lQ9CQD0 Gm10327-201ENSMUST00000105222 1002 ntBASIC8.9□□□□□ -0.98
Rpl39lQ9CQD0 Apip-201ENSMUST00000011055 919 ntAPPRIS P1 TSL 1 (best) BASIC8.9□□□□□ -0.98
Rpl39lQ9CQD0 Crybb2-202ENSMUST00000112336 906 ntAPPRIS P1 TSL 1 (best) BASIC8.9□□□□□ -0.98
Rpl39lQ9CQD0 Gm12981-201ENSMUST00000131733 622 ntTSL 1 (best) BASIC8.9□□□□□ -0.98
Rpl39lQ9CQD0 4930556N13Rik-201ENSMUST00000173677 1034 ntTSL 1 (best) BASIC8.9□□□□□ -0.98
Rpl39lQ9CQD0 Gm5069-202ENSMUST00000192714 1011 ntBASIC8.9□□□□□ -0.98
Rpl39lQ9CQD0 Gm7977-201ENSMUST00000193787 748 ntBASIC8.9□□□□□ -0.98
Rpl39lQ9CQD0 Lmo4-207ENSMUST00000196264 1263 ntTSL 5 BASIC8.9□□□□□ -0.98
Rpl39lQ9CQD0 Hs3st2-202ENSMUST00000206880 1149 ntTSL 1 (best) BASIC8.9□□□□□ -0.98
Rpl39lQ9CQD0 Gm45098-201ENSMUST00000207179 657 ntBASIC8.9□□□□□ -0.98
Rpl39lQ9CQD0 Ndufs6-204ENSMUST00000223293 757 ntTSL 2 BASIC8.9□□□□□ -0.98
Rpl39lQ9CQD0 Rbfox2-207ENSMUST00000227533 1041 ntBASIC8.9□□□□□ -0.98
Rpl39lQ9CQD0 Rab33a-201ENSMUST00000033430 1158 ntAPPRIS P1 TSL 1 (best) BASIC8.9□□□□□ -0.98
Rpl39lQ9CQD0 Apoa1-201ENSMUST00000034588 1035 ntAPPRIS P1 TSL 1 (best) BASIC8.9□□□□□ -0.98
Rpl39lQ9CQD0 Psmd4-201ENSMUST00000071664 1276 ntAPPRIS ALT2 TSL 1 (best) BASIC8.9□□□□□ -0.98
Rpl39lQ9CQD0 Rtl8a-201ENSMUST00000088779 1195 ntAPPRIS P1 BASIC8.9□□□□□ -0.98
Rpl39lQ9CQD0 Lrif1-202ENSMUST00000098751 929 ntTSL 2 BASIC8.9□□□□□ -0.98
Rpl39lQ9CQD0 Smtnl1-201ENSMUST00000028471 1761 ntAPPRIS P1 TSL 1 (best) BASIC8.9□□□□□ -0.98
Rpl39lQ9CQD0 Rtkn2-203ENSMUST00000117086 2246 ntAPPRIS ALT2 TSL 1 (best) BASIC8.9□□□□□ -0.98
Rpl39lQ9CQD0 Otub1-201ENSMUST00000025679 1713 ntAPPRIS P1 TSL 1 (best) BASIC8.9□□□□□ -0.98
Rpl39lQ9CQD0 Lctl-201ENSMUST00000034969 2171 ntAPPRIS P1 TSL 1 (best) BASIC8.9□□□□□ -0.98
Rpl39lQ9CQD0 Gm5592-202ENSMUST00000206490 2623 ntAPPRIS P1 TSL 5 BASIC8.9□□□□□ -0.98
Rpl39lQ9CQD0 Ints13-201ENSMUST00000032427 3059 ntAPPRIS P1 TSL 1 (best) BASIC8.9□□□□□ -0.99
Rpl39lQ9CQD0 Dph2-201ENSMUST00000030265 2555 ntAPPRIS P1 TSL 1 (best) BASIC8.9□□□□□ -0.99
Rpl39lQ9CQD0 D030025P21Rik-202ENSMUST00000220643 3987 ntBASIC8.9□□□□□ -0.99
Rpl39lQ9CQD0 Jakmip3-201ENSMUST00000106111 1571 ntAPPRIS P1 TSL 5 BASIC8.9□□□□□ -0.99
Rpl39lQ9CQD0 Nup88-203ENSMUST00000108531 2453 ntTSL 1 (best) BASIC8.9□□□□□ -0.99
Rpl39lQ9CQD0 Ly75-202ENSMUST00000112533 6901 ntAPPRIS ALT2 TSL 5 BASIC8.9□□□□□ -0.99
Rpl39lQ9CQD0 Banp-201ENSMUST00000026354 1970 ntTSL 1 (best) BASIC8.9□□□□□ -0.99
Rpl39lQ9CQD0 Api5-201ENSMUST00000028617 3736 ntAPPRIS P1 TSL 1 (best) BASIC8.9□□□□□ -0.99
Rpl39lQ9CQD0 Aldh9a1-201ENSMUST00000028004 2835 ntAPPRIS P1 TSL 1 (best) BASIC8.9□□□□□ -0.99
Rpl39lQ9CQD0 Camta2-205ENSMUST00000119120 4460 ntAPPRIS ALT2 TSL 1 (best) BASIC8.9□□□□□ -0.99
Rpl39lQ9CQD0 Wdr59-201ENSMUST00000034437 4896 ntTSL 1 (best) BASIC8.89□□□□□ -0.99
Rpl39lQ9CQD0 Ifnz-201ENSMUST00000105144 1462 ntAPPRIS P1 BASIC8.89□□□□□ -0.99
Rpl39lQ9CQD0 Gm13730-201ENSMUST00000121036 1462 ntBASIC8.89□□□□□ -0.99
Rpl39lQ9CQD0 Npcd-202ENSMUST00000089299 1453 ntAPPRIS P4 TSL 1 (best) BASIC8.89□□□□□ -0.99
Rpl39lQ9CQD0 Calu-206ENSMUST00000172974 3063 ntTSL 5 BASIC8.89□□□□□ -0.99
Rpl39lQ9CQD0 Trim27-205ENSMUST00000221464 1400 ntTSL 5 BASIC8.89□□□□□ -0.99
Rpl39lQ9CQD0 Hoxb13-201ENSMUST00000062709 2206 ntAPPRIS P1 TSL 1 (best) BASIC8.89□□□□□ -0.99
Rpl39lQ9CQD0 2810403A07Rik-201ENSMUST00000029696 2981 ntAPPRIS P1 TSL 1 (best) BASIC8.89□□□□□ -0.99
Rpl39lQ9CQD0 Gm15557-201ENSMUST00000109629 1380 ntAPPRIS P1 TSL 5 BASIC8.89□□□□□ -0.99
Rpl39lQ9CQD0 Cd302-202ENSMUST00000074606 1354 ntAPPRIS ALT2 TSL 1 (best) BASIC8.89□□□□□ -0.99
Rpl39lQ9CQD0 Gm14342-201ENSMUST00000137629 2119 ntTSL 1 (best) BASIC8.89□□□□□ -0.99
Rpl39lQ9CQD0 Efhc1-201ENSMUST00000038447 2146 ntAPPRIS P1 TSL 1 (best) BASIC8.89□□□□□ -0.99
Rpl39lQ9CQD0 Gpr139-201ENSMUST00000084650 4843 ntAPPRIS P1 TSL 1 (best) BASIC8.89□□□□□ -0.99
Rpl39lQ9CQD0 Rxrg-204ENSMUST00000111386 1705 ntAPPRIS P1 TSL 5 BASIC8.89□□□□□ -0.99
Rpl39lQ9CQD0 AL732309.2-201ENSMUST00000228052 3210 ntAPPRIS P1 BASIC8.89□□□□□ -0.99
Rpl39lQ9CQD0 Fbxo25-201ENSMUST00000043520 2012 ntAPPRIS P3 TSL 1 (best) BASIC8.89□□□□□ -0.99
Rpl39lQ9CQD0 Mtch2-211ENSMUST00000150232 2377 ntTSL 1 (best) BASIC8.89□□□□□ -0.99
Rpl39lQ9CQD0 Ccdc22-201ENSMUST00000033483 2353 ntAPPRIS P1 TSL 1 (best) BASIC8.89□□□□□ -0.99
Rpl39lQ9CQD0 Gmnn-202ENSMUST00000110382 963 ntAPPRIS P1 TSL 1 (best) BASIC8.89□□□□□ -0.99
Rpl39lQ9CQD0 Tmem176a-202ENSMUST00000168406 1086 ntAPPRIS P1 TSL 3 BASIC8.89□□□□□ -0.99
Rpl39lQ9CQD0 Gm2445-201ENSMUST00000182798 989 ntBASIC8.89□□□□□ -0.99
Rpl39lQ9CQD0 Zfyve21-204ENSMUST00000221375 1265 ntAPPRIS ALT2 TSL 1 (best) BASIC8.89□□□□□ -0.99
Rpl39lQ9CQD0 Dcxr-201ENSMUST00000026144 892 ntAPPRIS P1 TSL 1 (best) BASIC8.89□□□□□ -0.99
Rpl39lQ9CQD0 Fgf8-201ENSMUST00000026240 1117 ntAPPRIS P4 TSL 1 (best) BASIC8.89□□□□□ -0.99
Rpl39lQ9CQD0 Crb3-201ENSMUST00000071826 1194 ntAPPRIS P3 TSL 3 BASIC8.89□□□□□ -0.99
Rpl39lQ9CQD0 Hist1h2af-201ENSMUST00000073261 399 ntAPPRIS P1 BASIC8.89□□□□□ -0.99
Rpl39lQ9CQD0 Hlf-201ENSMUST00000004051 5642 ntAPPRIS P1 TSL 1 (best) BASIC8.89□□□□□ -0.99
Rpl39lQ9CQD0 Polr3g-201ENSMUST00000048993 3054 ntAPPRIS P1 TSL 1 (best) BASIC8.89□□□□□ -0.99
Rpl39lQ9CQD0 AC154725.1-201ENSMUST00000224826 1961 ntBASIC8.89□□□□□ -0.99
Rpl39lQ9CQD0 Ifnar2-201ENSMUST00000023693 3047 ntAPPRIS P3 TSL 1 (best) BASIC8.89□□□□□ -0.99
Rpl39lQ9CQD0 Ripk4-202ENSMUST00000113743 3743 ntTSL 1 (best) BASIC8.89□□□□□ -0.99
Rpl39lQ9CQD0 A730062M13Rik-201ENSMUST00000192843 1910 ntBASIC8.89□□□□□ -0.99
Rpl39lQ9CQD0 Cckar-201ENSMUST00000031093 2930 ntAPPRIS P1 TSL 1 (best) BASIC8.89□□□□□ -0.99
Rpl39lQ9CQD0 Mpp4-210ENSMUST00000191200 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC8.89□□□□□ -0.99
Rpl39lQ9CQD0 Scyl2-201ENSMUST00000092227 3566 ntAPPRIS ALT1 TSL 1 (best) BASIC8.89□□□□□ -0.99
Rpl39lQ9CQD0 Nyap1-202ENSMUST00000118326 4565 ntAPPRIS P3 TSL 1 (best) BASIC8.89□□□□□ -0.99
Rpl39lQ9CQD0 Gm16976-202ENSMUST00000127408 1515 ntTSL 1 (best) BASIC8.89□□□□□ -0.99
Retrieved 100 of 76,532 protein–RNA pairs in 30.6 ms