Protein–RNA interactions for Protein: Q99MA9

Nkx6-1, Homeobox protein Nkx-6.1, mousemouse

Predictions only

Length 365 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx6-1Q99MA9 Arhgap44-203ENSMUST00000093002 3982 ntAPPRIS ALT2 TSL 5 BASIC12.85□□□□□ -0.35
Nkx6-1Q99MA9 Dlk1-205ENSMUST00000109844 1703 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Nkx6-1Q99MA9 Gm26747-201ENSMUST00000180597 1716 ntTSL 5 BASIC12.85□□□□□ -0.35
Nkx6-1Q99MA9 Usp27x-203ENSMUST00000191497 4273 ntAPPRIS P1 TSL 2 BASIC12.85□□□□□ -0.35
Nkx6-1Q99MA9 Tcf3-210ENSMUST00000105346 2839 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Nkx6-1Q99MA9 Zbtb46-205ENSMUST00000180222 2014 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Nkx6-1Q99MA9 Dnm2-211ENSMUST00000173397 3510 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Nkx6-1Q99MA9 Maged2-203ENSMUST00000112699 2183 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Nkx6-1Q99MA9 Otud6b-201ENSMUST00000117268 3266 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Nkx6-1Q99MA9 Il11-201ENSMUST00000094892 1949 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Nkx6-1Q99MA9 Slc30a5-201ENSMUST00000067246 3179 ntAPPRIS P2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Nkx6-1Q99MA9 Psrc1-202ENSMUST00000102629 1687 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Nkx6-1Q99MA9 Ctgf-201ENSMUST00000020171 2398 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Nkx6-1Q99MA9 Spag1-202ENSMUST00000171205 3219 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Nkx6-1Q99MA9 Apoa4-201ENSMUST00000034585 1815 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Nkx6-1Q99MA9 Cuedc2-201ENSMUST00000051234 1833 ntAPPRIS P1 TSL 5 BASIC12.84□□□□□ -0.35
Nkx6-1Q99MA9 Eif3i-201ENSMUST00000102593 1123 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Nkx6-1Q99MA9 Ptgr2-205ENSMUST00000135001 1286 ntTSL 5 BASIC12.84□□□□□ -0.35
Nkx6-1Q99MA9 Pla2g10os-201ENSMUST00000141172 174 ntTSL 5 BASIC12.84□□□□□ -0.35
Nkx6-1Q99MA9 Fbxo41-203ENSMUST00000161546 6357 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Nkx6-1Q99MA9 Gm29179-208ENSMUST00000190450 1137 ntTSL 5 BASIC12.84□□□□□ -0.35
Nkx6-1Q99MA9 Gm38000-201ENSMUST00000192390 1215 ntBASIC12.84□□□□□ -0.35
Nkx6-1Q99MA9 1700045I11Rik-201ENSMUST00000194752 493 ntBASIC12.84□□□□□ -0.35
Nkx6-1Q99MA9 Gm7118-201ENSMUST00000200167 1003 ntBASIC12.84□□□□□ -0.35
Nkx6-1Q99MA9 4930502C17Rik-201ENSMUST00000200282 948 ntBASIC12.84□□□□□ -0.35
Nkx6-1Q99MA9 Olfr284-202ENSMUST00000206647 966 ntBASIC12.84□□□□□ -0.35
Nkx6-1Q99MA9 Hbb-bs-201ENSMUST00000023934 628 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Nkx6-1Q99MA9 Snora73a-201ENSMUST00000082453 205 ntBASIC12.84□□□□□ -0.35
Nkx6-1Q99MA9 Cenpm-202ENSMUST00000089157 1201 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Nkx6-1Q99MA9 Alkbh4-202ENSMUST00000100568 1714 ntAPPRIS P3 TSL 1 (best) BASIC12.84□□□□□ -0.35
Nkx6-1Q99MA9 Chaf1b-202ENSMUST00000117099 1894 ntAPPRIS P1 TSL 5 BASIC12.84□□□□□ -0.35
Nkx6-1Q99MA9 Rnaseh2a-203ENSMUST00000109738 2044 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Nkx6-1Q99MA9 Gpt2-201ENSMUST00000034136 3639 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Nkx6-1Q99MA9 Vsig10-202ENSMUST00000111967 4236 ntAPPRIS P2 TSL 5 BASIC12.84□□□□□ -0.35
Nkx6-1Q99MA9 Cnot7-201ENSMUST00000034012 2615 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Nkx6-1Q99MA9 Nfe2l1-201ENSMUST00000081775 4654 ntAPPRIS P3 TSL 1 (best) BASIC12.84□□□□□ -0.35
Nkx6-1Q99MA9 Scube1-201ENSMUST00000016907 3991 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Nkx6-1Q99MA9 Rapsn-202ENSMUST00000111445 1450 ntTSL 5 BASIC12.84□□□□□ -0.35
Nkx6-1Q99MA9 Cfp-201ENSMUST00000001156 1636 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Nkx6-1Q99MA9 Pglyrp2-201ENSMUST00000114455 1915 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Nkx6-1Q99MA9 Miga1-204ENSMUST00000199334 4024 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Nkx6-1Q99MA9 Adgrb2-202ENSMUST00000097868 4635 ntAPPRIS ALT2 TSL 5 BASIC12.84□□□□□ -0.35
Nkx6-1Q99MA9 Pam-201ENSMUST00000058762 4095 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.35
Nkx6-1Q99MA9 Nxnl1-202ENSMUST00000163659 2730 ntAPPRIS P1 TSL 2 BASIC12.83□□□□□ -0.35
Nkx6-1Q99MA9 Tfeb-201ENSMUST00000024786 2296 ntAPPRIS P3 TSL 1 (best) BASIC12.83□□□□□ -0.35
Nkx6-1Q99MA9 Cald1-201ENSMUST00000031775 2142 ntAPPRIS ALT2 TSL 5 BASIC12.83□□□□□ -0.35
Nkx6-1Q99MA9 Ncor2-203ENSMUST00000111393 8661 ntTSL 1 (best) BASIC12.83□□□□□ -0.35
Nkx6-1Q99MA9 BC051537-201ENSMUST00000183290 1668 ntTSL 1 (best) BASIC12.83□□□□□ -0.35
Nkx6-1Q99MA9 Tmem159-202ENSMUST00000118737 1395 ntAPPRIS P1 TSL 5 BASIC12.83□□□□□ -0.36
Nkx6-1Q99MA9 Tmem80-204ENSMUST00000128906 1387 ntTSL 2 BASIC12.83□□□□□ -0.36
Nkx6-1Q99MA9 2410018L13Rik-205ENSMUST00000149246 3370 ntTSL 2 BASIC12.83□□□□□ -0.36
Nkx6-1Q99MA9 Slc35f4-205ENSMUST00000146164 2480 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Nkx6-1Q99MA9 Eif4g3-215ENSMUST00000203828 5289 ntTSL 5 BASIC12.83□□□□□ -0.36
Nkx6-1Q99MA9 Kmt5c-203ENSMUST00000108583 2177 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Nkx6-1Q99MA9 Slc34a3-201ENSMUST00000006638 2183 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Nkx6-1Q99MA9 Serinc5-201ENSMUST00000049488 5366 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Nkx6-1Q99MA9 Mir686-201ENSMUST00000102174 109 ntBASIC12.83□□□□□ -0.36
Nkx6-1Q99MA9 Egfl7-211ENSMUST00000152988 723 ntTSL 2 BASIC12.83□□□□□ -0.36
Nkx6-1Q99MA9 A930009A15Rik-201ENSMUST00000173620 1001 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Nkx6-1Q99MA9 Senp1-204ENSMUST00000180657 3806 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Nkx6-1Q99MA9 Gm4971-201ENSMUST00000205991 1108 ntBASIC12.83□□□□□ -0.36
Nkx6-1Q99MA9 Atp6v0c-ps1-201ENSMUST00000206596 463 ntBASIC12.83□□□□□ -0.36
Nkx6-1Q99MA9 Gm45564-201ENSMUST00000210460 530 ntTSL 5 BASIC12.83□□□□□ -0.36
Nkx6-1Q99MA9 Gm10608-202ENSMUST00000213924 676 ntBASIC12.83□□□□□ -0.36
Nkx6-1Q99MA9 CT033793.1-201ENSMUST00000216883 565 ntTSL 5 BASIC12.83□□□□□ -0.36
Nkx6-1Q99MA9 Hcfc1r1-201ENSMUST00000024697 946 ntAPPRIS P2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Nkx6-1Q99MA9 Ceacam10-201ENSMUST00000038069 1048 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Nkx6-1Q99MA9 Nr0b2-201ENSMUST00000042706 1132 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Nkx6-1Q99MA9 Olfr171-201ENSMUST00000079891 945 ntAPPRIS P2 BASIC12.83□□□□□ -0.36
Nkx6-1Q99MA9 Gm24447-201ENSMUST00000083977 338 ntBASIC12.83□□□□□ -0.36
Nkx6-1Q99MA9 Zhx3-203ENSMUST00000109460 4480 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Nkx6-1Q99MA9 Nfyc-201ENSMUST00000043429 1932 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Nkx6-1Q99MA9 Qsox1-207ENSMUST00000194632 2433 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Nkx6-1Q99MA9 Lap3-201ENSMUST00000046122 2267 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Nkx6-1Q99MA9 Abhd3-203ENSMUST00000117828 1962 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Nkx6-1Q99MA9 Tor1aip1-201ENSMUST00000027738 1952 ntAPPRIS P3 TSL 1 (best) BASIC12.83□□□□□ -0.36
Nkx6-1Q99MA9 Cops7a-202ENSMUST00000112439 1328 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Nkx6-1Q99MA9 Gm20646-201ENSMUST00000176807 1316 ntTSL 3 BASIC12.83□□□□□ -0.36
Nkx6-1Q99MA9 Rpa2-201ENSMUST00000102561 1813 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Nkx6-1Q99MA9 Fam174b-201ENSMUST00000107456 2683 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Nkx6-1Q99MA9 Opn4-201ENSMUST00000022331 2156 ntAPPRIS P3 TSL 1 (best) BASIC12.83□□□□□ -0.36
Nkx6-1Q99MA9 Fgf5-201ENSMUST00000031280 2501 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Nkx6-1Q99MA9 Slk-202ENSMUST00000051691 4239 ntAPPRIS P3 TSL 1 (best) BASIC12.83□□□□□ -0.36
Nkx6-1Q99MA9 Fxyd3-205ENSMUST00000167369 2894 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Nkx6-1Q99MA9 Syt8-204ENSMUST00000118276 1503 ntAPPRIS P3 TSL 1 (best) BASIC12.83□□□□□ -0.36
Nkx6-1Q99MA9 Tm9sf1-204ENSMUST00000121937 2398 ntTSL 5 BASIC12.83□□□□□ -0.36
Nkx6-1Q99MA9 Camk2b-208ENSMUST00000109812 1875 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Nkx6-1Q99MA9 Sox21-201ENSMUST00000170662 3799 ntAPPRIS P1 BASIC12.82□□□□□ -0.36
Nkx6-1Q99MA9 Ushbp1-201ENSMUST00000049184 2438 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Nkx6-1Q99MA9 Cacna1b-201ENSMUST00000041342 6984 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Nkx6-1Q99MA9 Dcaf17-201ENSMUST00000064141 1905 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Nkx6-1Q99MA9 Ly6h-207ENSMUST00000163116 2801 ntAPPRIS ALT1 TSL 2 BASIC12.82□□□□□ -0.36
Nkx6-1Q99MA9 Arid3a-202ENSMUST00000105376 4892 ntAPPRIS P3 TSL 1 (best) BASIC12.82□□□□□ -0.36
Nkx6-1Q99MA9 Tmem181b-ps-203ENSMUST00000188746 1626 ntTSL 5 BASIC12.82□□□□□ -0.36
Nkx6-1Q99MA9 Srsf10-204ENSMUST00000105853 3058 ntAPPRIS P3 TSL 1 (best) BASIC12.82□□□□□ -0.36
Nkx6-1Q99MA9 Mir698-201ENSMUST00000102164 109 ntBASIC12.82□□□□□ -0.36
Nkx6-1Q99MA9 Cd63-202ENSMUST00000105229 1043 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Nkx6-1Q99MA9 Rpl3-ps2-201ENSMUST00000117131 1214 ntBASIC12.82□□□□□ -0.36
Nkx6-1Q99MA9 Gm5687-201ENSMUST00000118252 640 ntBASIC12.82□□□□□ -0.36
Nkx6-1Q99MA9 Polr3c-202ENSMUST00000125183 923 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 22.7 ms