Protein–RNA interactions for Protein: Q99LI9

Clp1, Polyribonucleotide 5'-hydroxyl-kinase Clp1, mousemouse

Predictions only

Length 425 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clp1Q99LI9 CT033793.1-201ENSMUST00000216883 565 ntTSL 5 BASIC14.41□□□□□ -0.1
Clp1Q99LI9 Gm8227-201ENSMUST00000223306 571 ntBASIC14.41□□□□□ -0.1
Clp1Q99LI9 Cryge-201ENSMUST00000087359 631 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Clp1Q99LI9 0610006L08Rik-201ENSMUST00000205326 1589 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Clp1Q99LI9 Chpf-202ENSMUST00000094818 3065 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Clp1Q99LI9 Rad54l2-201ENSMUST00000046502 9305 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Clp1Q99LI9 Dhdds-204ENSMUST00000105887 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Clp1Q99LI9 Slc31a2-201ENSMUST00000084530 1820 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
Clp1Q99LI9 Ank1-208ENSMUST00000121075 1740 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Clp1Q99LI9 Gpc5-201ENSMUST00000022707 1719 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Clp1Q99LI9 Ociad1-201ENSMUST00000031038 1523 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Clp1Q99LI9 App-204ENSMUST00000227021 3264 ntAPPRIS ALT2 BASIC14.4□□□□□ -0.1
Clp1Q99LI9 Rrp8-201ENSMUST00000033179 3053 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
Clp1Q99LI9 Etfdh-201ENSMUST00000029386 2377 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Clp1Q99LI9 Mfsd2a-201ENSMUST00000030408 2151 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Clp1Q99LI9 Psmd5-201ENSMUST00000028225 4397 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Clp1Q99LI9 Mmp21-201ENSMUST00000033278 1858 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Clp1Q99LI9 Trim65-201ENSMUST00000067632 3048 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Clp1Q99LI9 Pdcd6-203ENSMUST00000222759 1376 ntAPPRIS ALT1 TSL 2 BASIC14.4□□□□□ -0.1
Clp1Q99LI9 Fam71f2-201ENSMUST00000115286 1180 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Clp1Q99LI9 Gm14350-201ENSMUST00000116642 640 ntBASIC14.4□□□□□ -0.1
Clp1Q99LI9 Rhox7-ps1-201ENSMUST00000117595 806 ntBASIC14.4□□□□□ -0.1
Clp1Q99LI9 Cdkn1a-202ENSMUST00000119901 748 ntAPPRIS P1 TSL 2 BASIC14.4□□□□□ -0.1
Clp1Q99LI9 C530008M17Rik-205ENSMUST00000121851 1165 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Clp1Q99LI9 Gm13123-201ENSMUST00000122173 492 ntBASIC14.4□□□□□ -0.1
Clp1Q99LI9 4933406I18Rik-201ENSMUST00000124673 905 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Clp1Q99LI9 Gm20479-201ENSMUST00000126587 556 ntAPPRIS P1 TSL 3 BASIC14.4□□□□□ -0.1
Clp1Q99LI9 Bcas1os1-201ENSMUST00000133586 1239 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Clp1Q99LI9 Gm6334-201ENSMUST00000207083 228 ntBASIC14.4□□□□□ -0.1
Clp1Q99LI9 0610005C13Rik-202ENSMUST00000209510 671 ntTSL 3 BASIC14.4□□□□□ -0.1
Clp1Q99LI9 Gm33056-201ENSMUST00000213234 1120 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Clp1Q99LI9 Olfr1346-201ENSMUST00000056144 1051 ntAPPRIS P1 BASIC14.4□□□□□ -0.1
Clp1Q99LI9 n-R5s195-201ENSMUST00000082891 119 ntBASIC14.4□□□□□ -0.1
Clp1Q99LI9 Srp72-202ENSMUST00000120550 2297 ntAPPRIS ALT2 TSL 5 BASIC14.4□□□□□ -0.1
Clp1Q99LI9 Gtf2a1l-201ENSMUST00000024970 1621 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Clp1Q99LI9 Retreg3-202ENSMUST00000107295 3179 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Clp1Q99LI9 Traf7-210ENSMUST00000176353 2503 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Clp1Q99LI9 AC140354.1-201ENSMUST00000219499 2425 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Clp1Q99LI9 Gm11725-201ENSMUST00000125607 1850 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Clp1Q99LI9 Reps2-202ENSMUST00000112334 7675 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Clp1Q99LI9 Chd4-201ENSMUST00000056889 6697 ntAPPRIS P2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Clp1Q99LI9 Hs3st1-202ENSMUST00000117944 1686 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Clp1Q99LI9 A230077H06Rik-201ENSMUST00000188579 2918 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Clp1Q99LI9 Alox5-201ENSMUST00000026795 2821 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Clp1Q99LI9 Grip2-205ENSMUST00000162300 5206 ntAPPRIS P2 TSL 5 BASIC14.39□□□□□ -0.11
Clp1Q99LI9 Dennd4c-201ENSMUST00000045512 5648 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
Clp1Q99LI9 Ica1l-201ENSMUST00000027172 3650 ntAPPRIS P2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Clp1Q99LI9 Dlat-201ENSMUST00000034567 4035 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Clp1Q99LI9 Adamts2-201ENSMUST00000040523 7266 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Clp1Q99LI9 2310057J18Rik-201ENSMUST00000015663 1238 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Clp1Q99LI9 4930524O07Rik-201ENSMUST00000161822 1050 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Clp1Q99LI9 Gm20404-201ENSMUST00000174032 621 ntTSL 3 BASIC14.39□□□□□ -0.11
Clp1Q99LI9 Rab11b-ps2-201ENSMUST00000178377 657 ntBASIC14.39□□□□□ -0.11
Clp1Q99LI9 Gm43714-201ENSMUST00000198351 1204 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Clp1Q99LI9 Hax1-207ENSMUST00000198782 855 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
Clp1Q99LI9 Gm45881-201ENSMUST00000210659 517 ntTSL 5 BASIC14.39□□□□□ -0.11
Clp1Q99LI9 Pfdn1-201ENSMUST00000025204 1077 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Clp1Q99LI9 1700120B22Rik-201ENSMUST00000054837 464 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Clp1Q99LI9 Olfr171-201ENSMUST00000079891 945 ntAPPRIS P2 BASIC14.39□□□□□ -0.11
Clp1Q99LI9 Akp-ps1-201ENSMUST00000188050 1600 ntBASIC14.39□□□□□ -0.11
Clp1Q99LI9 Abhd6-203ENSMUST00000225234 1958 ntBASIC14.39□□□□□ -0.11
Clp1Q99LI9 Strap-201ENSMUST00000064910 2650 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Clp1Q99LI9 Rad18-201ENSMUST00000068487 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Clp1Q99LI9 Smg9-201ENSMUST00000002280 2242 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Clp1Q99LI9 Vwa3b-202ENSMUST00000067178 1769 ntAPPRIS P5 TSL 2 BASIC14.39□□□□□ -0.11
Clp1Q99LI9 Sra1-205ENSMUST00000173875 2360 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Clp1Q99LI9 2900005J15Rik-202ENSMUST00000171190 2025 ntBASIC14.39□□□□□ -0.11
Clp1Q99LI9 Gm43579-201ENSMUST00000202387 1307 ntBASIC14.39□□□□□ -0.11
Clp1Q99LI9 Rufy3-205ENSMUST00000198965 3536 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Clp1Q99LI9 Nacc2-201ENSMUST00000028300 6378 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Clp1Q99LI9 Igbp1b-201ENSMUST00000054786 1456 ntAPPRIS P1 BASIC14.38□□□□□ -0.11
Clp1Q99LI9 N6amt1-203ENSMUST00000118310 1700 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Clp1Q99LI9 Prss8-202ENSMUST00000206124 1709 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Clp1Q99LI9 Zfp384-202ENSMUST00000054553 2451 ntTSL 5 BASIC14.38□□□□□ -0.11
Clp1Q99LI9 Pik3c2b-201ENSMUST00000077730 7928 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
Clp1Q99LI9 Gpr19-208ENSMUST00000165392 1643 ntTSL 3 BASIC14.38□□□□□ -0.11
Clp1Q99LI9 Gm18630-201ENSMUST00000222109 1397 ntBASIC14.38□□□□□ -0.11
Clp1Q99LI9 Gpr19-202ENSMUST00000066107 1647 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Clp1Q99LI9 Dcaf4-208ENSMUST00000223291 2005 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Clp1Q99LI9 Cstf2-203ENSMUST00000113287 3661 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Clp1Q99LI9 Usp4-201ENSMUST00000035237 3662 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
Clp1Q99LI9 Tarsl2-201ENSMUST00000032728 3192 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Clp1Q99LI9 Slit1-202ENSMUST00000166496 4556 ntTSL 5 BASIC14.38□□□□□ -0.11
Clp1Q99LI9 Itk-202ENSMUST00000101306 1185 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Clp1Q99LI9 Cdk3-ps-202ENSMUST00000174177 915 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
Clp1Q99LI9 D930030I03Rik-201ENSMUST00000180735 920 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Clp1Q99LI9 Swi5-207ENSMUST00000183946 768 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
Clp1Q99LI9 Gm38000-201ENSMUST00000192390 1215 ntBASIC14.38□□□□□ -0.11
Clp1Q99LI9 Gm38158-201ENSMUST00000194617 339 ntBASIC14.38□□□□□ -0.11
Clp1Q99LI9 Sox2ot-205ENSMUST00000196795 754 ntTSL 3 BASIC14.38□□□□□ -0.11
Clp1Q99LI9 1810059H22Rik-208ENSMUST00000204941 642 ntTSL 2 BASIC14.38□□□□□ -0.11
Clp1Q99LI9 1810062G17Rik-201ENSMUST00000029268 911 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Clp1Q99LI9 Nudt22-201ENSMUST00000041686 1000 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Clp1Q99LI9 S100a8-201ENSMUST00000069927 486 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Clp1Q99LI9 Gm38102-201ENSMUST00000192791 1935 ntBASIC14.38□□□□□ -0.11
Clp1Q99LI9 Rbfox3-203ENSMUST00000103023 2809 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Clp1Q99LI9 2010007H06Rik-202ENSMUST00000186025 4934 ntTSL 2 BASIC14.38□□□□□ -0.11
Clp1Q99LI9 Pptc7-202ENSMUST00000119015 2233 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Clp1Q99LI9 Ifngr2-201ENSMUST00000023687 3254 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Clp1Q99LI9 Nrxn1-204ENSMUST00000159778 3414 ntTSL 5 BASIC14.38□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 37.7 ms