Protein–RNA interactions for Protein: Q8K4L0

Ddx54, ATP-dependent RNA helicase DDX54, mousemouse

Known RBP Predictions only

Length 874 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx54Q8K4L0 Gm18615-201ENSMUST00000222919 1031 ntBASIC17.83■□□□□ 0.44
Ddx54Q8K4L0 Fam92b-201ENSMUST00000048786 1187 ntAPPRIS P1 TSL 5 BASIC17.83■□□□□ 0.44
Ddx54Q8K4L0 Asphd1-201ENSMUST00000052937 730 ntAPPRIS P3 TSL 1 (best) BASIC17.83■□□□□ 0.44
Ddx54Q8K4L0 Cryga-201ENSMUST00000061497 625 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Ddx54Q8K4L0 Smarcd2-203ENSMUST00000106843 2548 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
Ddx54Q8K4L0 Exoc3l-201ENSMUST00000057855 2497 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Ddx54Q8K4L0 Ggnbp2-211ENSMUST00000168434 3056 ntAPPRIS ALT1 TSL 5 BASIC17.83■□□□□ 0.44
Ddx54Q8K4L0 Gm44616-201ENSMUST00000206417 1732 ntBASIC17.83■□□□□ 0.44
Ddx54Q8K4L0 Slc4a5-202ENSMUST00000113899 5039 ntAPPRIS ALT2 TSL 5 BASIC17.83■□□□□ 0.44
Ddx54Q8K4L0 Eftud2-202ENSMUST00000107060 3339 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
Ddx54Q8K4L0 Eif4g1-206ENSMUST00000115463 5378 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.44
Ddx54Q8K4L0 Zdhhc18-201ENSMUST00000084238 4580 ntAPPRIS P1 TSL 2 BASIC17.82■□□□□ 0.44
Ddx54Q8K4L0 Capn1-202ENSMUST00000164843 3048 ntAPPRIS P1 TSL 5 BASIC17.82■□□□□ 0.44
Ddx54Q8K4L0 Vegfa-202ENSMUST00000071648 3451 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
Ddx54Q8K4L0 Hcfc2-201ENSMUST00000020478 3422 ntAPPRIS P1 TSL 5 BASIC17.82■□□□□ 0.44
Ddx54Q8K4L0 Fbxl19-207ENSMUST00000206893 3449 ntAPPRIS ALT2 TSL 5 BASIC17.82■□□□□ 0.44
Ddx54Q8K4L0 Gnao1-203ENSMUST00000125716 3462 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Ddx54Q8K4L0 Dda1-206ENSMUST00000138892 1738 ntTSL 3 BASIC17.82■□□□□ 0.44
Ddx54Q8K4L0 Neu2-203ENSMUST00000164128 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
Ddx54Q8K4L0 Dock1-206ENSMUST00000211593 2589 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Ddx54Q8K4L0 Lsm10-203ENSMUST00000179323 808 ntAPPRIS P1 TSL 2 BASIC17.82■□□□□ 0.44
Ddx54Q8K4L0 Prr29-204ENSMUST00000188561 592 ntAPPRIS ALT2 TSL 5 BASIC17.82■□□□□ 0.44
Ddx54Q8K4L0 Prr29-206ENSMUST00000190795 822 ntTSL 5 BASIC17.82■□□□□ 0.44
Ddx54Q8K4L0 2010310C07Rik-202ENSMUST00000190889 842 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Ddx54Q8K4L0 Gm42817-201ENSMUST00000198962 607 ntTSL 3 BASIC17.82■□□□□ 0.44
Ddx54Q8K4L0 Gm18584-201ENSMUST00000203098 964 ntBASIC17.82■□□□□ 0.44
Ddx54Q8K4L0 Mrpl18-201ENSMUST00000079121 1219 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Ddx54Q8K4L0 Stat3-207ENSMUST00000138438 2506 ntTSL 5 BASIC17.82■□□□□ 0.44
Ddx54Q8K4L0 Shroom3-203ENSMUST00000113055 6765 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Ddx54Q8K4L0 Rbm26-203ENSMUST00000163499 4212 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Ddx54Q8K4L0 Hsd3b6-202ENSMUST00000170847 1539 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Ddx54Q8K4L0 Cd300lf-202ENSMUST00000106561 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
Ddx54Q8K4L0 Tomt-202ENSMUST00000106970 1354 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Ddx54Q8K4L0 Usp20-201ENSMUST00000061544 1360 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Ddx54Q8K4L0 Hacd3-201ENSMUST00000036615 2709 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Ddx54Q8K4L0 Hnrnpul1-201ENSMUST00000043765 3354 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Ddx54Q8K4L0 Slc22a7-201ENSMUST00000087012 2007 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Ddx54Q8K4L0 Fgf11-202ENSMUST00000102585 3039 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Ddx54Q8K4L0 Tor1aip2-205ENSMUST00000111757 6118 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Ddx54Q8K4L0 Mapk8ip3-207ENSMUST00000121723 5410 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
Ddx54Q8K4L0 Tagln2-201ENSMUST00000111228 716 ntAPPRIS P1 TSL 3 BASIC17.81■□□□□ 0.44
Ddx54Q8K4L0 Gm14130-201ENSMUST00000118417 987 ntBASIC17.81■□□□□ 0.44
Ddx54Q8K4L0 Gm12363-201ENSMUST00000122250 668 ntBASIC17.81■□□□□ 0.44
Ddx54Q8K4L0 Gm26956-201ENSMUST00000182176 986 ntBASIC17.81■□□□□ 0.44
Ddx54Q8K4L0 Gm27023-201ENSMUST00000182372 285 ntBASIC17.81■□□□□ 0.44
Ddx54Q8K4L0 Mb-201ENSMUST00000019037 966 ntAPPRIS P1 TSL 2 BASIC17.81■□□□□ 0.44
Ddx54Q8K4L0 Gm8176-201ENSMUST00000191297 1099 ntBASIC17.81■□□□□ 0.44
Ddx54Q8K4L0 Gm33175-201ENSMUST00000211562 461 ntTSL 5 BASIC17.81■□□□□ 0.44
Ddx54Q8K4L0 Keap1-205ENSMUST00000194542 3151 ntAPPRIS P2 TSL 1 (best) BASIC17.81■□□□□ 0.44
Ddx54Q8K4L0 Krt17-201ENSMUST00000080893 1551 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Ddx54Q8K4L0 Csnk2a2-201ENSMUST00000056919 3773 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Ddx54Q8K4L0 Zfp865-203ENSMUST00000085427 2751 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Ddx54Q8K4L0 Sirpa-203ENSMUST00000103202 3982 ntAPPRIS P3 TSL 1 (best) BASIC17.81■□□□□ 0.44
Ddx54Q8K4L0 1500009C09Rik-201ENSMUST00000136948 1526 ntAPPRIS P5 TSL 3 BASIC17.81■□□□□ 0.44
Ddx54Q8K4L0 6430550D23Rik-201ENSMUST00000086145 1520 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
Ddx54Q8K4L0 Cngb1-201ENSMUST00000093268 1512 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Ddx54Q8K4L0 Echdc1-202ENSMUST00000160399 1845 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Ddx54Q8K4L0 Parg-204ENSMUST00000164137 3013 ntTSL 5 BASIC17.81■□□□□ 0.44
Ddx54Q8K4L0 Zfand6-208ENSMUST00000209117 2955 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Ddx54Q8K4L0 Zfp36l2-201ENSMUST00000060366 3530 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Ddx54Q8K4L0 Smarcd1-201ENSMUST00000023759 3153 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Ddx54Q8K4L0 Mfap4-202ENSMUST00000064783 1722 ntAPPRIS P3 TSL 1 (best) BASIC17.81■□□□□ 0.44
Ddx54Q8K4L0 Det1-202ENSMUST00000107431 1439 ntTSL 5 BASIC17.81■□□□□ 0.44
Ddx54Q8K4L0 AC126549.2-201ENSMUST00000223997 1976 ntBASIC17.8■□□□□ 0.44
Ddx54Q8K4L0 Kcnc2-201ENSMUST00000092175 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
Ddx54Q8K4L0 Tmem119-201ENSMUST00000067853 2242 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Ddx54Q8K4L0 Naa50-203ENSMUST00000159514 3756 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Ddx54Q8K4L0 Gm20632-201ENSMUST00000176760 2427 ntBASIC17.8■□□□□ 0.44
Ddx54Q8K4L0 Slc25a19-212ENSMUST00000178003 2614 ntAPPRIS P1 TSL 5 BASIC17.8■□□□□ 0.44
Ddx54Q8K4L0 Gm10434-201ENSMUST00000101158 471 ntBASIC17.8■□□□□ 0.44
Ddx54Q8K4L0 Birc7-201ENSMUST00000108875 1178 ntAPPRIS P1 TSL 5 BASIC17.8■□□□□ 0.44
Ddx54Q8K4L0 Lamr1-ps1-201ENSMUST00000119759 874 ntBASIC17.8■□□□□ 0.44
Ddx54Q8K4L0 4933407E24Rik-201ENSMUST00000133499 969 ntTSL 2 BASIC17.8■□□□□ 0.44
Ddx54Q8K4L0 Nbdy-201ENSMUST00000140575 788 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
Ddx54Q8K4L0 Nbdy-202ENSMUST00000149514 775 ntAPPRIS ALT2 TSL 2 BASIC17.8■□□□□ 0.44
Ddx54Q8K4L0 Timm10b-208ENSMUST00000151193 1083 ntTSL 2 BASIC17.8■□□□□ 0.44
Ddx54Q8K4L0 Gm24548-201ENSMUST00000158650 108 ntBASIC17.8■□□□□ 0.44
Ddx54Q8K4L0 Gm17586-201ENSMUST00000181502 908 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Ddx54Q8K4L0 C230062I16Rik-204ENSMUST00000208342 643 ntTSL 3 BASIC17.8■□□□□ 0.44
Ddx54Q8K4L0 AC153974.2-201ENSMUST00000218577 1025 ntBASIC17.8■□□□□ 0.44
Ddx54Q8K4L0 AC154680.1-201ENSMUST00000224376 859 ntBASIC17.8■□□□□ 0.44
Ddx54Q8K4L0 Fam173b-201ENSMUST00000042702 1164 ntAPPRIS P2 TSL 1 (best) BASIC17.8■□□□□ 0.44
Ddx54Q8K4L0 Asb8-201ENSMUST00000059112 1049 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Ddx54Q8K4L0 S100a8-201ENSMUST00000069927 486 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Ddx54Q8K4L0 Iqcm-203ENSMUST00000212704 2035 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Ddx54Q8K4L0 Cspp1-205ENSMUST00000122156 2535 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Ddx54Q8K4L0 Ppp6r2-208ENSMUST00000228284 3297 ntAPPRIS P1 BASIC17.8■□□□□ 0.44
Ddx54Q8K4L0 Pacrg-201ENSMUST00000041463 1475 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Ddx54Q8K4L0 Smarce1-201ENSMUST00000103133 2919 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Ddx54Q8K4L0 Ocrl-201ENSMUST00000001202 5253 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Ddx54Q8K4L0 Gm4425-201ENSMUST00000172838 2857 ntTSL 2 BASIC17.8■□□□□ 0.44
Ddx54Q8K4L0 Gpihbp1-203ENSMUST00000189874 1652 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Ddx54Q8K4L0 Olfml2a-201ENSMUST00000057279 5579 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Ddx54Q8K4L0 Spcs2-210ENSMUST00000209032 1610 ntTSL 5 BASIC17.8■□□□□ 0.44
Ddx54Q8K4L0 4833422C13Rik-201ENSMUST00000099331 2083 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Ddx54Q8K4L0 Rexo4-202ENSMUST00000114020 2278 ntAPPRIS P2 TSL 1 (best) BASIC17.79■□□□□ 0.44
Ddx54Q8K4L0 AI849053-201ENSMUST00000181021 2658 ntTSL 3 BASIC17.79■□□□□ 0.44
Ddx54Q8K4L0 Gm5106-201ENSMUST00000181058 1334 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Ddx54Q8K4L0 Pde4d-203ENSMUST00000117420 1955 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Ddx54Q8K4L0 Dse-201ENSMUST00000048010 4389 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Retrieved 100 of 76,532 protein–RNA pairs in 53.3 ms