Protein–RNA interactions for Protein: Q8CJ40

Crocc, Rootletin, mousemouse

Predictions only

Length 2,009 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CroccQ8CJ40 Gm11723-201ENSMUST00000155505 466 ntTSL 3 BASIC13.12□□□□□ -0.31
CroccQ8CJ40 Gm5626-201ENSMUST00000222151 1058 ntBASIC13.12□□□□□ -0.31
CroccQ8CJ40 Ins1-201ENSMUST00000039652 1016 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
CroccQ8CJ40 Gm9797-201ENSMUST00000052902 613 ntBASIC13.12□□□□□ -0.31
CroccQ8CJ40 Slc19a2-201ENSMUST00000044021 3571 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
CroccQ8CJ40 Gm13859-201ENSMUST00000119936 1423 ntBASIC13.12□□□□□ -0.31
CroccQ8CJ40 Tnrc6c-201ENSMUST00000026658 8724 ntAPPRIS P1 TSL 5 BASIC13.12□□□□□ -0.31
CroccQ8CJ40 Rnf123-214ENSMUST00000162355 4727 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
CroccQ8CJ40 Slc52a3-202ENSMUST00000109858 2094 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
CroccQ8CJ40 Lypd6-201ENSMUST00000053208 3620 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
CroccQ8CJ40 Pdcd6-203ENSMUST00000222759 1376 ntAPPRIS ALT1 TSL 2 BASIC13.12□□□□□ -0.31
CroccQ8CJ40 Lmod3-201ENSMUST00000095655 2215 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
CroccQ8CJ40 Sgce-207ENSMUST00000126151 1522 ntTSL 5 BASIC13.12□□□□□ -0.31
CroccQ8CJ40 Lrrc7-204ENSMUST00000199890 6326 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
CroccQ8CJ40 Lman2-201ENSMUST00000021940 4315 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
CroccQ8CJ40 Ppcdc-209ENSMUST00000214624 1814 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
CroccQ8CJ40 Ggt7-201ENSMUST00000029131 2614 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
CroccQ8CJ40 Zfp647-201ENSMUST00000048854 1608 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
CroccQ8CJ40 A530083I20Rik-201ENSMUST00000180486 2421 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
CroccQ8CJ40 Fgd4-211ENSMUST00000162671 2714 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
CroccQ8CJ40 Actn4-211ENSMUST00000217157 3530 ntTSL 5 BASIC13.12□□□□□ -0.31
CroccQ8CJ40 B9d1-201ENSMUST00000102657 817 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
CroccQ8CJ40 Gm2423-201ENSMUST00000074863 733 ntBASIC13.12□□□□□ -0.31
CroccQ8CJ40 Olfr142-201ENSMUST00000099752 918 ntAPPRIS P1 BASIC13.12□□□□□ -0.31
CroccQ8CJ40 Ift52-201ENSMUST00000018002 2248 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
CroccQ8CJ40 Luc7l3-202ENSMUST00000107820 3478 ntAPPRIS P1 TSL 5 BASIC13.11□□□□□ -0.31
CroccQ8CJ40 Specc1-209ENSMUST00000201671 2523 ntTSL 5 BASIC13.11□□□□□ -0.31
CroccQ8CJ40 Cln3-203ENSMUST00000098036 1571 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
CroccQ8CJ40 Gm20488-201ENSMUST00000201641 2996 ntTSL 2 BASIC13.11□□□□□ -0.31
CroccQ8CJ40 Psmd1-201ENSMUST00000027432 3112 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
CroccQ8CJ40 Gpat2-201ENSMUST00000062211 2628 ntAPPRIS P1 TSL 5 BASIC13.11□□□□□ -0.31
CroccQ8CJ40 Plk4-203ENSMUST00000203295 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
CroccQ8CJ40 Zfp574-202ENSMUST00000179556 4140 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
CroccQ8CJ40 Car3-201ENSMUST00000029076 1679 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
CroccQ8CJ40 Rps6ka4-202ENSMUST00000170516 3105 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
CroccQ8CJ40 Rps6ka4-201ENSMUST00000025903 3105 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
CroccQ8CJ40 Kcnd3-203ENSMUST00000118360 2668 ntAPPRIS P4 TSL 5 BASIC13.11□□□□□ -0.31
CroccQ8CJ40 Rpe-201ENSMUST00000027157 2692 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
CroccQ8CJ40 Eno2-216ENSMUST00000204896 1640 ntTSL 5 BASIC13.11□□□□□ -0.31
CroccQ8CJ40 Myg1-202ENSMUST00000113682 1480 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
CroccQ8CJ40 Ocrl-201ENSMUST00000001202 5253 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
CroccQ8CJ40 Anks1b-231ENSMUST00000183136 2786 ntTSL 5 BASIC13.11□□□□□ -0.31
CroccQ8CJ40 Pias3-202ENSMUST00000107076 2858 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
CroccQ8CJ40 Rpusd2-201ENSMUST00000028796 2706 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
CroccQ8CJ40 Gm18244-201ENSMUST00000219747 1566 ntBASIC13.11□□□□□ -0.31
CroccQ8CJ40 Tspan31-201ENSMUST00000060991 1556 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
CroccQ8CJ40 Spcs2-ps-201ENSMUST00000122326 682 ntBASIC13.11□□□□□ -0.31
CroccQ8CJ40 Ccl25-205ENSMUST00000127460 867 ntAPPRIS ALT2 TSL 5 BASIC13.11□□□□□ -0.31
CroccQ8CJ40 Tctn3-202ENSMUST00000132452 1271 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
CroccQ8CJ40 Ccdc24-209ENSMUST00000171052 891 ntAPPRIS P1 TSL 5 BASIC13.11□□□□□ -0.31
CroccQ8CJ40 Gm26830-201ENSMUST00000180389 993 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
CroccQ8CJ40 Mir8102-201ENSMUST00000184148 139 ntBASIC13.11□□□□□ -0.31
CroccQ8CJ40 Gm27772-201ENSMUST00000184900 187 ntBASIC13.11□□□□□ -0.31
CroccQ8CJ40 Kansl3-206ENSMUST00000187628 336 ntTSL 5 BASIC13.11□□□□□ -0.31
CroccQ8CJ40 Gm4756-204ENSMUST00000209038 990 ntTSL 5 BASIC13.11□□□□□ -0.31
CroccQ8CJ40 Reep6-201ENSMUST00000040081 850 ntTSL 5 BASIC13.11□□□□□ -0.31
CroccQ8CJ40 Rpl10-ps2-201ENSMUST00000098432 645 ntBASIC13.11□□□□□ -0.31
CroccQ8CJ40 Map6-204ENSMUST00000127492 4920 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
CroccQ8CJ40 Gm28386-201ENSMUST00000189147 1849 ntBASIC13.11□□□□□ -0.31
CroccQ8CJ40 Col25a1-201ENSMUST00000080335 2624 ntAPPRIS P4 TSL 5 BASIC13.11□□□□□ -0.31
CroccQ8CJ40 Fam71f1-204ENSMUST00000166462 1363 ntAPPRIS ALT1 TSL 1 (best) BASIC13.11□□□□□ -0.31
CroccQ8CJ40 Zbtb17-201ENSMUST00000006377 2722 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
CroccQ8CJ40 Wapl-205ENSMUST00000169910 4066 ntAPPRIS P3 TSL 1 (best) BASIC13.11□□□□□ -0.31
CroccQ8CJ40 Knop1-203ENSMUST00000106549 1467 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
CroccQ8CJ40 Paqr8-202ENSMUST00000167119 1472 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
CroccQ8CJ40 Slc38a7-204ENSMUST00000212270 3315 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
CroccQ8CJ40 Evpl-201ENSMUST00000037007 6384 ntAPPRIS P1 TSL 2 BASIC13.11□□□□□ -0.31
CroccQ8CJ40 Myrf-201ENSMUST00000088013 5674 ntAPPRIS ALT2 TSL 5 BASIC13.1□□□□□ -0.31
CroccQ8CJ40 Tjap1-202ENSMUST00000164342 2559 ntAPPRIS P2 TSL 1 (best) BASIC13.1□□□□□ -0.31
CroccQ8CJ40 Sema5b-202ENSMUST00000120756 4646 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
CroccQ8CJ40 Kansl3-205ENSMUST00000186470 2801 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
CroccQ8CJ40 Gm42928-201ENSMUST00000197338 3339 ntBASIC13.1□□□□□ -0.31
CroccQ8CJ40 Trav3d-3-201ENSMUST00000103599 276 ntAPPRIS P1 BASIC13.1□□□□□ -0.31
CroccQ8CJ40 Trav3n-3-201ENSMUST00000103625 276 ntAPPRIS P1 BASIC13.1□□□□□ -0.31
CroccQ8CJ40 Gm12537-201ENSMUST00000119266 1002 ntBASIC13.1□□□□□ -0.31
CroccQ8CJ40 Gm12070-201ENSMUST00000119551 1002 ntBASIC13.1□□□□□ -0.31
CroccQ8CJ40 Gm12671-201ENSMUST00000119978 1002 ntBASIC13.1□□□□□ -0.31
CroccQ8CJ40 Gm13292-201ENSMUST00000120014 1000 ntBASIC13.1□□□□□ -0.31
CroccQ8CJ40 Gm12403-201ENSMUST00000121384 959 ntBASIC13.1□□□□□ -0.31
CroccQ8CJ40 Rab15-204ENSMUST00000122419 856 ntTSL 5 BASIC13.1□□□□□ -0.31
CroccQ8CJ40 Ptgr2-205ENSMUST00000135001 1286 ntTSL 5 BASIC13.1□□□□□ -0.31
CroccQ8CJ40 Gm15747-202ENSMUST00000151096 524 ntTSL 3 BASIC13.1□□□□□ -0.31
CroccQ8CJ40 Sf3a2-204ENSMUST00000151928 781 ntTSL 5 BASIC13.1□□□□□ -0.31
CroccQ8CJ40 Gm26464-201ENSMUST00000157094 305 ntBASIC13.1□□□□□ -0.31
CroccQ8CJ40 Tac2-202ENSMUST00000179960 852 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
CroccQ8CJ40 Gm10359-201ENSMUST00000180167 1002 ntBASIC13.1□□□□□ -0.31
CroccQ8CJ40 Gm12033-201ENSMUST00000180654 1002 ntBASIC13.1□□□□□ -0.31
CroccQ8CJ40 Gm5559-201ENSMUST00000180755 1002 ntBASIC13.1□□□□□ -0.31
CroccQ8CJ40 Gm4335-201ENSMUST00000182581 1004 ntBASIC13.1□□□□□ -0.31
CroccQ8CJ40 Trav3-3-202ENSMUST00000183835 276 ntAPPRIS P1 BASIC13.1□□□□□ -0.31
CroccQ8CJ40 Gm27989-201ENSMUST00000184721 107 ntBASIC13.1□□□□□ -0.31
CroccQ8CJ40 Tbc1d17-209ENSMUST00000207293 692 ntTSL 3 BASIC13.1□□□□□ -0.31
CroccQ8CJ40 AC099934.3-201ENSMUST00000223192 1147 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
CroccQ8CJ40 Wdyhv1-203ENSMUST00000226889 394 ntBASIC13.1□□□□□ -0.31
CroccQ8CJ40 Tac2-201ENSMUST00000026466 678 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
CroccQ8CJ40 Zfp146-201ENSMUST00000062181 2029 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
CroccQ8CJ40 Tm7sf2-203ENSMUST00000159084 1351 ntTSL 5 BASIC13.1□□□□□ -0.31
CroccQ8CJ40 6030458C11Rik-202ENSMUST00000227299 3206 ntBASIC13.1□□□□□ -0.31
CroccQ8CJ40 Rab39-201ENSMUST00000068449 2971 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
CroccQ8CJ40 Gad1-205ENSMUST00000130998 1705 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Retrieved 100 of 76,532 protein–RNA pairs in 72.5 ms