Protein–RNA interactions for Protein: Q8CIE6

Copa, Coatomer subunit alpha, mousemouse

Known RBP Predictions only

Length 1,224 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CopaQ8CIE6 Tmem128-202ENSMUST00000119047 726 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
CopaQ8CIE6 Lamtor3-201ENSMUST00000168345 1295 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
CopaQ8CIE6 Gm29585-201ENSMUST00000185270 514 ntTSL 5 BASIC14.03□□□□□ -0.16
CopaQ8CIE6 Gm36979-201ENSMUST00000193616 539 ntTSL 5 BASIC14.03□□□□□ -0.16
CopaQ8CIE6 Agrp-202ENSMUST00000194091 734 ntAPPRIS P1 TSL 2 BASIC14.03□□□□□ -0.16
CopaQ8CIE6 1700028J19Rik-203ENSMUST00000206686 1166 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
CopaQ8CIE6 Cplx3-202ENSMUST00000215487 594 ntTSL 3 BASIC14.03□□□□□ -0.16
CopaQ8CIE6 Mt1-201ENSMUST00000034215 549 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
CopaQ8CIE6 Clstn2-202ENSMUST00000162295 4174 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
CopaQ8CIE6 B3gnt8-201ENSMUST00000076034 1463 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
CopaQ8CIE6 Pds5b-201ENSMUST00000016569 7417 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
CopaQ8CIE6 Rreb1-202ENSMUST00000110237 4617 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
CopaQ8CIE6 Ecsit-201ENSMUST00000098937 1673 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
CopaQ8CIE6 Ccnh-204ENSMUST00000164127 1718 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
CopaQ8CIE6 Neu2-203ENSMUST00000164128 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
CopaQ8CIE6 Hadh-201ENSMUST00000029610 1789 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
CopaQ8CIE6 Thnsl2-201ENSMUST00000074241 1821 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
CopaQ8CIE6 Phgdh-201ENSMUST00000065793 1893 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
CopaQ8CIE6 Tcf4-253ENSMUST00000202610 1959 ntTSL 5 BASIC14.03□□□□□ -0.16
CopaQ8CIE6 Flt4-201ENSMUST00000020617 6255 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
CopaQ8CIE6 Ccdc155-201ENSMUST00000121017 2262 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
CopaQ8CIE6 Trim68-205ENSMUST00000210855 2301 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
CopaQ8CIE6 Dlgap1-202ENSMUST00000097288 2626 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
CopaQ8CIE6 Men1-208ENSMUST00000113504 2663 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
CopaQ8CIE6 Kcnq2-207ENSMUST00000103050 2713 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
CopaQ8CIE6 Pbx3-202ENSMUST00000113132 2734 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
CopaQ8CIE6 Suv39h1-201ENSMUST00000115636 2707 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
CopaQ8CIE6 Xrra1-201ENSMUST00000036155 2731 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
CopaQ8CIE6 Mapk7-202ENSMUST00000101085 3254 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
CopaQ8CIE6 Smc6-208ENSMUST00000218866 3373 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
CopaQ8CIE6 Lpar1-201ENSMUST00000055018 3512 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
CopaQ8CIE6 Edc4-201ENSMUST00000040254 4780 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
CopaQ8CIE6 Ccdc8-201ENSMUST00000094805 4809 ntAPPRIS P1 BASIC14.03□□□□□ -0.16
CopaQ8CIE6 Yipf6-201ENSMUST00000054697 5211 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
CopaQ8CIE6 Kmt2e-202ENSMUST00000115128 7317 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
CopaQ8CIE6 Ralgapb-203ENSMUST00000109486 8383 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
CopaQ8CIE6 Zbtb39-201ENSMUST00000054287 5960 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
CopaQ8CIE6 Zfp740-201ENSMUST00000118729 4241 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.16
CopaQ8CIE6 Zfp367-201ENSMUST00000059817 3532 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.16
CopaQ8CIE6 Zfp36l1-201ENSMUST00000021552 2990 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
CopaQ8CIE6 5730409E04Rik-201ENSMUST00000097886 2886 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
CopaQ8CIE6 Lgals8-202ENSMUST00000099821 2792 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
CopaQ8CIE6 Edil3-203ENSMUST00000118731 2721 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
CopaQ8CIE6 Gm38346-201ENSMUST00000192379 2639 ntBASIC14.02□□□□□ -0.16
CopaQ8CIE6 Gnpda2-201ENSMUST00000031117 1894 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.16
CopaQ8CIE6 Klf12-201ENSMUST00000097079 1856 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
CopaQ8CIE6 Mmp11-202ENSMUST00000120281 1793 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
CopaQ8CIE6 Sirt5-207ENSMUST00000221515 1793 ntTSL 5 BASIC14.02□□□□□ -0.16
CopaQ8CIE6 Spo11-201ENSMUST00000050442 1709 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.16
CopaQ8CIE6 Bscl2-201ENSMUST00000086058 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
CopaQ8CIE6 Gm14928-201ENSMUST00000120198 477 ntBASIC14.02□□□□□ -0.17
CopaQ8CIE6 A530058N18Rik-202ENSMUST00000134129 411 ntTSL 3 BASIC14.02□□□□□ -0.17
CopaQ8CIE6 Tmem262-201ENSMUST00000143303 545 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
CopaQ8CIE6 Gm12352-201ENSMUST00000154452 760 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
CopaQ8CIE6 AI413582-204ENSMUST00000154473 836 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
CopaQ8CIE6 Gm8584-201ENSMUST00000171982 758 ntBASIC14.02□□□□□ -0.17
CopaQ8CIE6 Gm9794-201ENSMUST00000202370 423 ntBASIC14.02□□□□□ -0.17
CopaQ8CIE6 Slc10a7-204ENSMUST00000209992 939 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
CopaQ8CIE6 Gm7653-201ENSMUST00000214567 508 ntBASIC14.02□□□□□ -0.17
CopaQ8CIE6 CR974585.1-201ENSMUST00000221790 1263 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
CopaQ8CIE6 AC121598.1-201ENSMUST00000228224 1019 ntBASIC14.02□□□□□ -0.17
CopaQ8CIE6 Srd5a2-201ENSMUST00000043458 854 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
CopaQ8CIE6 Prtn3-201ENSMUST00000006679 1025 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
CopaQ8CIE6 Gm9949-201ENSMUST00000067743 962 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
CopaQ8CIE6 Kcnip2-203ENSMUST00000086993 1005 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
CopaQ8CIE6 Cmpk1-201ENSMUST00000030491 3170 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
CopaQ8CIE6 B3gnt3-201ENSMUST00000034260 3055 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
CopaQ8CIE6 Camk2d-202ENSMUST00000066466 4075 ntAPPRIS ALT1 TSL 1 (best) BASIC14.02□□□□□ -0.17
CopaQ8CIE6 Rufy3-203ENSMUST00000196894 3703 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
CopaQ8CIE6 Gm42688-201ENSMUST00000101253 3628 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.17
CopaQ8CIE6 Crat-202ENSMUST00000102854 2160 ntTSL 5 BASIC14.02□□□□□ -0.17
CopaQ8CIE6 Tmed5-202ENSMUST00000061203 2194 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
CopaQ8CIE6 Fam53b-201ENSMUST00000065371 5052 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
CopaQ8CIE6 Miat-205ENSMUST00000182953 9163 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
CopaQ8CIE6 Trem1-202ENSMUST00000113251 2077 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
CopaQ8CIE6 Stag1-206ENSMUST00000129269 6186 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
CopaQ8CIE6 G3bp2-209ENSMUST00000202258 1884 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
CopaQ8CIE6 Ssc5d-201ENSMUST00000057612 4348 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
CopaQ8CIE6 Syt10-201ENSMUST00000029441 1845 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
CopaQ8CIE6 Alx1-208ENSMUST00000219194 1695 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
CopaQ8CIE6 Zfp647-201ENSMUST00000048854 1608 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
CopaQ8CIE6 Ldb3-207ENSMUST00000227819 1499 ntBASIC14.01□□□□□ -0.17
CopaQ8CIE6 Clcn4-203ENSMUST00000210061 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
CopaQ8CIE6 Ptp4a2-207ENSMUST00000165853 3382 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
CopaQ8CIE6 Krt18-201ENSMUST00000023803 1400 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
CopaQ8CIE6 Rgs16-201ENSMUST00000027748 2339 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
CopaQ8CIE6 Rwdd2a-201ENSMUST00000034988 1355 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
CopaQ8CIE6 Zfp276-201ENSMUST00000001092 4071 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
CopaQ8CIE6 2610507B11Rik-201ENSMUST00000010421 7443 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
CopaQ8CIE6 B230359F08Rik-201ENSMUST00000103671 426 ntAPPRIS P1 BASIC14.01□□□□□ -0.17
CopaQ8CIE6 Rgs19-204ENSMUST00000108772 779 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
CopaQ8CIE6 Map2k3os-201ENSMUST00000123544 1291 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
CopaQ8CIE6 Atcayos-202ENSMUST00000129950 1117 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
CopaQ8CIE6 Flt3l-201ENSMUST00000146760 1075 ntAPPRIS P2 TSL 1 (best) BASIC14.01□□□□□ -0.17
CopaQ8CIE6 Tmem109-207ENSMUST00000147699 1096 ntTSL 2 BASIC14.01□□□□□ -0.17
CopaQ8CIE6 Gstt4-202ENSMUST00000160211 964 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
CopaQ8CIE6 Gm21854-201ENSMUST00000179901 471 ntBASIC14.01□□□□□ -0.17
CopaQ8CIE6 Cxcl17-202ENSMUST00000200880 760 ntAPPRIS P2 TSL 1 (best) BASIC14.01□□□□□ -0.17
CopaQ8CIE6 Tgif2-ps2-201ENSMUST00000061746 711 ntBASIC14.01□□□□□ -0.17
CopaQ8CIE6 Cxcl17-201ENSMUST00000074040 761 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 48 ms