Protein–RNA interactions for Protein: Q8CCB4

Vps53, Vacuolar protein sorting-associated protein 53 homolog, mousemouse

Predictions only

Length 832 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps53Q8CCB4 Cuedc2-201ENSMUST00000051234 1833 ntAPPRIS P1 TSL 5 BASIC15.98■□□□□ 0.15
Vps53Q8CCB4 Dnajb2-210ENSMUST00000188931 3066 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
Vps53Q8CCB4 Catip-201ENSMUST00000097697 2101 ntAPPRIS P2 TSL 1 (best) BASIC15.98■□□□□ 0.15
Vps53Q8CCB4 Pik3cd-214ENSMUST00000177654 4765 ntAPPRIS P4 TSL 5 BASIC15.98■□□□□ 0.15
Vps53Q8CCB4 Gm44291-201ENSMUST00000203102 2865 ntBASIC15.98■□□□□ 0.15
Vps53Q8CCB4 Trem1-202ENSMUST00000113251 2077 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
Vps53Q8CCB4 Mul1-203ENSMUST00000105815 473 ntTSL 3 BASIC15.98■□□□□ 0.15
Vps53Q8CCB4 Rph3al-203ENSMUST00000108420 695 ntTSL 3 BASIC15.98■□□□□ 0.15
Vps53Q8CCB4 E130201H02Rik-201ENSMUST00000123576 851 ntBASIC15.98■□□□□ 0.15
Vps53Q8CCB4 Gm12352-201ENSMUST00000154452 760 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
Vps53Q8CCB4 4930592C13Rik-201ENSMUST00000196791 661 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
Vps53Q8CCB4 2610028D06Rik-201ENSMUST00000215216 1713 ntBASIC15.98■□□□□ 0.15
Vps53Q8CCB4 Ndufc2-201ENSMUST00000032882 683 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Vps53Q8CCB4 Tgif2-ps2-201ENSMUST00000061746 711 ntBASIC15.98■□□□□ 0.15
Vps53Q8CCB4 Olfr1412-201ENSMUST00000062964 966 ntAPPRIS P1 BASIC15.98■□□□□ 0.15
Vps53Q8CCB4 9130008F23Rik-201ENSMUST00000068258 2159 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Vps53Q8CCB4 Ltbp2-203ENSMUST00000163189 6470 ntAPPRIS ALT2 TSL 1 (best) BASIC15.98■□□□□ 0.15
Vps53Q8CCB4 Col6a2-202ENSMUST00000105413 4653 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
Vps53Q8CCB4 Sipa1-203ENSMUST00000164304 3614 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Vps53Q8CCB4 Trf-201ENSMUST00000035158 2571 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Vps53Q8CCB4 Brsk2-204ENSMUST00000105989 2149 ntAPPRIS P4 TSL 5 BASIC15.98■□□□□ 0.15
Vps53Q8CCB4 Mllt6-202ENSMUST00000107586 7206 ntAPPRIS ALT2 TSL 5 BASIC15.98■□□□□ 0.15
Vps53Q8CCB4 Macrod2-204ENSMUST00000110062 3554 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
Vps53Q8CCB4 1810014B01Rik-201ENSMUST00000181587 1661 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
Vps53Q8CCB4 Cchcr1-202ENSMUST00000164242 2656 ntAPPRIS P2 TSL 1 (best) BASIC15.98■□□□□ 0.15
Vps53Q8CCB4 Palm-201ENSMUST00000046945 2651 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Vps53Q8CCB4 Tm9sf1-201ENSMUST00000002391 2382 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Vps53Q8CCB4 Tmub2-205ENSMUST00000156326 2249 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Vps53Q8CCB4 Foxo4-201ENSMUST00000062000 3162 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Vps53Q8CCB4 Erc1-207ENSMUST00000183911 3865 ntTSL 5 BASIC15.97■□□□□ 0.15
Vps53Q8CCB4 Fam192a-201ENSMUST00000034226 2873 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Vps53Q8CCB4 Dnmt1-207ENSMUST00000216540 5543 ntAPPRIS ALT2 TSL 1 (best) BASIC15.97■□□□□ 0.15
Vps53Q8CCB4 Gckr-201ENSMUST00000072228 2014 ntAPPRIS P2 TSL 1 (best) BASIC15.97■□□□□ 0.15
Vps53Q8CCB4 Lime1-201ENSMUST00000048077 1959 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Vps53Q8CCB4 Dcp1b-202ENSMUST00000112777 3313 ntAPPRIS P2 TSL 1 (best) BASIC15.97■□□□□ 0.15
Vps53Q8CCB4 Rhbdl3-201ENSMUST00000017836 3736 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Vps53Q8CCB4 Retreg3-201ENSMUST00000017946 3165 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Vps53Q8CCB4 Slc25a21-201ENSMUST00000044634 2609 ntAPPRIS P3 TSL 1 (best) BASIC15.97■□□□□ 0.15
Vps53Q8CCB4 Capns2-201ENSMUST00000104947 1005 ntAPPRIS P1 BASIC15.97■□□□□ 0.15
Vps53Q8CCB4 Gm15440-201ENSMUST00000110042 1231 ntAPPRIS P1 TSL 5 BASIC15.97■□□□□ 0.15
Vps53Q8CCB4 Apoo-203ENSMUST00000113897 1218 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
Vps53Q8CCB4 Ucma-204ENSMUST00000167607 785 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
Vps53Q8CCB4 Gm10535-201ENSMUST00000182275 915 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
Vps53Q8CCB4 Ube2f-210ENSMUST00000191368 1110 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Vps53Q8CCB4 Isca2-201ENSMUST00000021667 883 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Vps53Q8CCB4 Cela1-201ENSMUST00000023775 1103 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Vps53Q8CCB4 Tlcd2-201ENSMUST00000043598 1153 ntAPPRIS P3 TSL 1 (best) BASIC15.97■□□□□ 0.15
Vps53Q8CCB4 Slc9a3r2-202ENSMUST00000019684 1688 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
Vps53Q8CCB4 Odf2-203ENSMUST00000113755 2305 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
Vps53Q8CCB4 Glmn-202ENSMUST00000082121 1945 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Vps53Q8CCB4 Gm42878-202ENSMUST00000200170 4783 ntAPPRIS P1 TSL 2 BASIC15.97■□□□□ 0.15
Vps53Q8CCB4 Nfxl1-202ENSMUST00000087216 3712 ntAPPRIS P1 TSL 5 BASIC15.97■□□□□ 0.15
Vps53Q8CCB4 Dysf-213ENSMUST00000203803 6590 ntTSL 5 BASIC15.97■□□□□ 0.15
Vps53Q8CCB4 Mettl7a3-201ENSMUST00000075420 1618 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Vps53Q8CCB4 B3gat1-204ENSMUST00000160899 3801 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
Vps53Q8CCB4 Serinc1-201ENSMUST00000020027 2880 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Vps53Q8CCB4 Ptprn2-201ENSMUST00000070733 3201 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Vps53Q8CCB4 Smarca4-204ENSMUST00000174008 5405 ntAPPRIS ALT1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Vps53Q8CCB4 A230077H06Rik-201ENSMUST00000188579 2918 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
Vps53Q8CCB4 Tmem39a-214ENSMUST00000171687 2667 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
Vps53Q8CCB4 Gm11992-201ENSMUST00000043285 2400 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Vps53Q8CCB4 Tmem19-203ENSMUST00000217884 2799 ntTSL 5 BASIC15.96■□□□□ 0.15
Vps53Q8CCB4 Snx22-201ENSMUST00000044711 2543 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Vps53Q8CCB4 Krba1-203ENSMUST00000114571 6695 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
Vps53Q8CCB4 Kcnh2-201ENSMUST00000036092 4221 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Vps53Q8CCB4 Sh3bp5-202ENSMUST00000100730 2633 ntAPPRIS ALT2 TSL 1 (best) BASIC15.96■□□□□ 0.15
Vps53Q8CCB4 Gucy2e-201ENSMUST00000021259 8331 ntAPPRIS P1 TSL 5 BASIC15.96■□□□□ 0.15
Vps53Q8CCB4 H2afb1-201ENSMUST00000122446 348 ntAPPRIS P1 BASIC15.96■□□□□ 0.15
Vps53Q8CCB4 1700016P03Rik-201ENSMUST00000134252 863 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
Vps53Q8CCB4 Gm13066-201ENSMUST00000145263 884 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
Vps53Q8CCB4 Gm42722-201ENSMUST00000198855 940 ntTSL 3 BASIC15.96■□□□□ 0.15
Vps53Q8CCB4 CT030161.3-201ENSMUST00000218235 367 ntTSL 3 BASIC15.96■□□□□ 0.15
Vps53Q8CCB4 AC121598.1-201ENSMUST00000228224 1019 ntBASIC15.96■□□□□ 0.15
Vps53Q8CCB4 AC156016.3-201ENSMUST00000228623 344 ntBASIC15.96■□□□□ 0.15
Vps53Q8CCB4 Gm9797-201ENSMUST00000052902 613 ntBASIC15.96■□□□□ 0.15
Vps53Q8CCB4 Hilpda-201ENSMUST00000054445 982 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Vps53Q8CCB4 Ptk2-202ENSMUST00000170939 3598 ntTSL 2 BASIC15.96■□□□□ 0.15
Vps53Q8CCB4 Six4-202ENSMUST00000175693 6817 ntAPPRIS ALT2 TSL 5 BASIC15.96■□□□□ 0.15
Vps53Q8CCB4 Atp2a3-204ENSMUST00000108486 4540 ntAPPRIS ALT2 TSL 5 BASIC15.96■□□□□ 0.15
Vps53Q8CCB4 Crybg2-213ENSMUST00000227683 5578 ntAPPRIS ALT2 BASIC15.96■□□□□ 0.15
Vps53Q8CCB4 Otop2-201ENSMUST00000055490 2335 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Vps53Q8CCB4 Hdac7-202ENSMUST00000088402 4223 ntAPPRIS P3 TSL 1 (best) BASIC15.96■□□□□ 0.15
Vps53Q8CCB4 Nfasc-208ENSMUST00000188307 3049 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
Vps53Q8CCB4 Taf1a-201ENSMUST00000097043 1472 ntAPPRIS P1 TSL 5 BASIC15.96■□□□□ 0.14
Vps53Q8CCB4 Oscar-202ENSMUST00000108645 1829 ntAPPRIS ALT2 TSL 1 (best) BASIC15.96■□□□□ 0.14
Vps53Q8CCB4 Oscar-201ENSMUST00000039507 1823 ntAPPRIS P3 TSL 1 (best) BASIC15.96■□□□□ 0.14
Vps53Q8CCB4 Jakmip1-201ENSMUST00000043794 2383 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Vps53Q8CCB4 Chit1-201ENSMUST00000086475 1688 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Vps53Q8CCB4 Klc2-201ENSMUST00000025798 2940 ntTSL 5 BASIC15.95■□□□□ 0.14
Vps53Q8CCB4 Nfat5-201ENSMUST00000075922 4619 ntAPPRIS ALT2 TSL 1 (best) BASIC15.95■□□□□ 0.14
Vps53Q8CCB4 Cd3eap-201ENSMUST00000047036 2239 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Vps53Q8CCB4 BC001981-202ENSMUST00000191393 1545 ntBASIC15.95■□□□□ 0.14
Vps53Q8CCB4 Zfp647-201ENSMUST00000048854 1608 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Vps53Q8CCB4 Ss18-201ENSMUST00000040924 3090 ntAPPRIS P3 TSL 1 (best) BASIC15.95■□□□□ 0.14
Vps53Q8CCB4 Pmvk-202ENSMUST00000107410 652 ntTSL 5 BASIC15.95■□□□□ 0.14
Vps53Q8CCB4 Lzts3-203ENSMUST00000110260 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC15.95■□□□□ 0.14
Vps53Q8CCB4 Gnb2-209ENSMUST00000143495 1285 ntTSL 5 BASIC15.95■□□□□ 0.14
Vps53Q8CCB4 Pbx2-205ENSMUST00000183827 1186 ntTSL 5 BASIC15.95■□□□□ 0.14
Vps53Q8CCB4 Gm8602-201ENSMUST00000184045 607 ntBASIC15.95■□□□□ 0.14
Vps53Q8CCB4 Gm28760-201ENSMUST00000185995 736 ntBASIC15.95■□□□□ 0.14
Retrieved 100 of 76,532 protein–RNA pairs in 27.8 ms