Protein–RNA interactions for Protein: Q8CC84

Lysmd4, LysM and putative peptidoglycan-binding domain-containing protein 4, mousemouse

Predictions only

Length 293 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lysmd4Q8CC84 AC131586.3-201ENSMUST00000228355 1367 ntBASIC12.3□□□□□ -0.44
Lysmd4Q8CC84 Zdhhc23-201ENSMUST00000036321 1380 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Lysmd4Q8CC84 Ypel3-203ENSMUST00000106357 1594 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Lysmd4Q8CC84 Gm36745-201ENSMUST00000213455 1594 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Lysmd4Q8CC84 Gm7114-201ENSMUST00000190159 1789 ntBASIC12.3□□□□□ -0.44
Lysmd4Q8CC84 Gm26593-201ENSMUST00000181848 1970 ntTSL 5 BASIC12.3□□□□□ -0.44
Lysmd4Q8CC84 Lctl-201ENSMUST00000034969 2171 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Lysmd4Q8CC84 Setd1b-206ENSMUST00000174836 7515 ntAPPRIS ALT2 TSL 5 BASIC12.3□□□□□ -0.44
Lysmd4Q8CC84 BC048403-202ENSMUST00000136432 2968 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Lysmd4Q8CC84 Sumf2-204ENSMUST00000171300 2264 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Lysmd4Q8CC84 Gm14379-201ENSMUST00000128858 1878 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Lysmd4Q8CC84 Nrf1-211ENSMUST00000115212 3584 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Lysmd4Q8CC84 Gnb1l-211ENSMUST00000167778 3569 ntAPPRIS P3 TSL 1 (best) BASIC12.3□□□□□ -0.44
Lysmd4Q8CC84 Parp10-202ENSMUST00000165738 3367 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Lysmd4Q8CC84 Hist1h4d-201ENSMUST00000102968 1138 ntAPPRIS P1 BASIC12.3□□□□□ -0.44
Lysmd4Q8CC84 Gosr2-202ENSMUST00000107013 1044 ntTSL 2 BASIC12.3□□□□□ -0.44
Lysmd4Q8CC84 Uqcrq-203ENSMUST00000109021 405 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Lysmd4Q8CC84 Gm6222-201ENSMUST00000120787 396 ntBASIC12.3□□□□□ -0.44
Lysmd4Q8CC84 Gm16091-201ENSMUST00000156664 963 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Lysmd4Q8CC84 Gm17271-201ENSMUST00000165535 355 ntBASIC12.3□□□□□ -0.44
Lysmd4Q8CC84 Gm37714-201ENSMUST00000194742 342 ntBASIC12.3□□□□□ -0.44
Lysmd4Q8CC84 Abhd18-207ENSMUST00000203892 1021 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Lysmd4Q8CC84 Gm45683-201ENSMUST00000210825 1247 ntBASIC12.3□□□□□ -0.44
Lysmd4Q8CC84 Gm5364-201ENSMUST00000216789 889 ntBASIC12.3□□□□□ -0.44
Lysmd4Q8CC84 AC149588.3-201ENSMUST00000227515 150 ntBASIC12.3□□□□□ -0.44
Lysmd4Q8CC84 Cnpy2-201ENSMUST00000026446 763 ntAPPRIS P1 TSL 5 BASIC12.3□□□□□ -0.44
Lysmd4Q8CC84 Bpifa3-201ENSMUST00000028984 1107 ntAPPRIS P3 TSL 1 (best) BASIC12.3□□□□□ -0.44
Lysmd4Q8CC84 Ly6g6f-201ENSMUST00000038507 1141 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Lysmd4Q8CC84 Sf3b6-201ENSMUST00000046207 1180 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Lysmd4Q8CC84 Gpr146-202ENSMUST00000053120 1040 ntBASIC12.3□□□□□ -0.44
Lysmd4Q8CC84 H2bfm-201ENSMUST00000059808 1052 ntAPPRIS P1 BASIC12.3□□□□□ -0.44
Lysmd4Q8CC84 Anapc11-201ENSMUST00000026128 3229 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Lysmd4Q8CC84 Grm5-204ENSMUST00000155358 4500 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Lysmd4Q8CC84 Gad1-205ENSMUST00000130998 1705 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Lysmd4Q8CC84 Dcp1b-201ENSMUST00000073909 1748 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Lysmd4Q8CC84 Bcas3-201ENSMUST00000074875 2814 ntAPPRIS P3 TSL 5 BASIC12.3□□□□□ -0.44
Lysmd4Q8CC84 Plin3-201ENSMUST00000019726 2159 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Lysmd4Q8CC84 Diaph1-204ENSMUST00000115631 5741 ntAPPRIS ALT2 TSL 5 BASIC12.3□□□□□ -0.44
Lysmd4Q8CC84 Mdm2-202ENSMUST00000105263 3145 ntTSL 5 BASIC12.3□□□□□ -0.44
Lysmd4Q8CC84 Ablim2-201ENSMUST00000054598 3564 ntAPPRIS P3 TSL 1 (best) BASIC12.3□□□□□ -0.44
Lysmd4Q8CC84 Nfasc-207ENSMUST00000187861 4927 ntTSL 5 BASIC12.3□□□□□ -0.44
Lysmd4Q8CC84 Acap1-201ENSMUST00000001631 2482 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Lysmd4Q8CC84 AC114543.1-201ENSMUST00000226451 1558 ntBASIC12.3□□□□□ -0.44
Lysmd4Q8CC84 Adat3-201ENSMUST00000178231 4516 ntAPPRIS P1 TSL 2 BASIC12.3□□□□□ -0.44
Lysmd4Q8CC84 Hvcn1-201ENSMUST00000072602 2790 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Lysmd4Q8CC84 Dclk2-206ENSMUST00000193632 2336 ntAPPRIS ALT2 TSL 5 BASIC12.29□□□□□ -0.44
Lysmd4Q8CC84 Ptpn6-201ENSMUST00000004377 2308 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Lysmd4Q8CC84 Lrp10-201ENSMUST00000022782 4228 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Lysmd4Q8CC84 Vrtn-202ENSMUST00000166772 3098 ntAPPRIS P1 TSL 3 BASIC12.29□□□□□ -0.44
Lysmd4Q8CC84 Clcn6-201ENSMUST00000030879 3306 ntAPPRIS P2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Lysmd4Q8CC84 Tnfrsf21-201ENSMUST00000024708 3626 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Lysmd4Q8CC84 Casc4-202ENSMUST00000089912 3602 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Lysmd4Q8CC84 Eme1-201ENSMUST00000039949 2444 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Lysmd4Q8CC84 Hdac11-201ENSMUST00000041736 2653 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Lysmd4Q8CC84 Strip2-201ENSMUST00000046028 5370 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Lysmd4Q8CC84 Ltbp4-204ENSMUST00000118961 3444 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Lysmd4Q8CC84 Gucy2e-201ENSMUST00000021259 8331 ntAPPRIS P1 TSL 5 BASIC12.29□□□□□ -0.44
Lysmd4Q8CC84 Mob1a-202ENSMUST00000055261 4412 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Lysmd4Q8CC84 Scarb2-201ENSMUST00000031377 4698 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Lysmd4Q8CC84 Selenbp1-201ENSMUST00000090839 1712 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Lysmd4Q8CC84 Selenbp2-201ENSMUST00000090848 1719 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Lysmd4Q8CC84 Cd80-201ENSMUST00000099816 1701 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Lysmd4Q8CC84 Gspt1-205ENSMUST00000167571 3716 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Lysmd4Q8CC84 4931440F15Rik-201ENSMUST00000104962 3274 ntAPPRIS P1 BASIC12.29□□□□□ -0.44
Lysmd4Q8CC84 Creb3l3-201ENSMUST00000117422 2294 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Lysmd4Q8CC84 Iffo2-202ENSMUST00000123827 2036 ntAPPRIS P3 TSL 1 (best) BASIC12.29□□□□□ -0.44
Lysmd4Q8CC84 Gm4782-201ENSMUST00000168705 2046 ntBASIC12.29□□□□□ -0.44
Lysmd4Q8CC84 4931428F04Rik-203ENSMUST00000212219 2044 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Lysmd4Q8CC84 Tubg2-201ENSMUST00000043654 1754 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Lysmd4Q8CC84 Gm10369-201ENSMUST00000100641 1148 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Lysmd4Q8CC84 Ins2-205ENSMUST00000105933 552 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Lysmd4Q8CC84 Ins2-206ENSMUST00000105934 480 ntAPPRIS P1 TSL 3 BASIC12.29□□□□□ -0.44
Lysmd4Q8CC84 Dnajc8-205ENSMUST00000105939 746 ntTSL 5 BASIC12.29□□□□□ -0.44
Lysmd4Q8CC84 Olfr1564-201ENSMUST00000112162 1091 ntAPPRIS P2 BASIC12.29□□□□□ -0.44
Lysmd4Q8CC84 2410006H16Rik-201ENSMUST00000131787 462 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Lysmd4Q8CC84 Edn3-203ENSMUST00000140908 731 ntAPPRIS ALT2 TSL 5 BASIC12.29□□□□□ -0.44
Lysmd4Q8CC84 Fam241b-208ENSMUST00000142796 1135 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Lysmd4Q8CC84 Ccdc24-209ENSMUST00000171052 891 ntAPPRIS P1 TSL 5 BASIC12.29□□□□□ -0.44
Lysmd4Q8CC84 Gm28942-201ENSMUST00000186334 365 ntTSL 3 BASIC12.29□□□□□ -0.44
Lysmd4Q8CC84 Il31-203ENSMUST00000198901 984 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Lysmd4Q8CC84 Trip6-203ENSMUST00000199121 366 ntTSL 3 BASIC12.29□□□□□ -0.44
Lysmd4Q8CC84 AI463170-204ENSMUST00000220157 447 ntTSL 3 BASIC12.29□□□□□ -0.44
Lysmd4Q8CC84 Tbcc-201ENSMUST00000040434 1164 ntAPPRIS P1 BASIC12.29□□□□□ -0.44
Lysmd4Q8CC84 Mir497b-201ENSMUST00000093601 125 ntBASIC12.29□□□□□ -0.44
Lysmd4Q8CC84 Ppp4r3b-201ENSMUST00000020755 5125 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Lysmd4Q8CC84 P2rx6-201ENSMUST00000023441 2345 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Lysmd4Q8CC84 BB123696-201ENSMUST00000222580 2056 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Lysmd4Q8CC84 Mtch2-211ENSMUST00000150232 2377 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Lysmd4Q8CC84 Kifc1-204ENSMUST00000173492 2350 ntAPPRIS P2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Lysmd4Q8CC84 Mef2b-204ENSMUST00000110146 1342 ntAPPRIS P3 TSL 1 (best) BASIC12.29□□□□□ -0.44
Lysmd4Q8CC84 Nt5c3b-202ENSMUST00000092689 1344 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Lysmd4Q8CC84 Csrnp1-201ENSMUST00000035101 2906 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Lysmd4Q8CC84 Gsn-201ENSMUST00000028239 2653 ntAPPRIS P3 TSL 1 (best) BASIC12.29□□□□□ -0.44
Lysmd4Q8CC84 Vmn1r65-201ENSMUST00000086338 2682 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Lysmd4Q8CC84 Parp2-201ENSMUST00000036126 1894 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Lysmd4Q8CC84 Gm14452-201ENSMUST00000118680 1632 ntBASIC12.29□□□□□ -0.44
Lysmd4Q8CC84 Lcmt1-201ENSMUST00000033025 1369 ntAPPRIS P2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Lysmd4Q8CC84 Rit2-202ENSMUST00000139924 1674 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Lysmd4Q8CC84 Cbx6-202ENSMUST00000109625 3056 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Lysmd4Q8CC84 Acbd5-213ENSMUST00000227809 1986 ntAPPRIS ALT2 BASIC12.29□□□□□ -0.44
Retrieved 100 of 76,532 protein–RNA pairs in 58 ms