Protein–RNA interactions for Protein: Q8C4J0

Ccdc60, Coiled-coil domain-containing protein 60, mousemouse

Predictions only

Length 545 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc60Q8C4J0 Tmem242-201ENSMUST00000005053 948 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Ccdc60Q8C4J0 Erp29-201ENSMUST00000052590 1123 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Ccdc60Q8C4J0 Car5a-201ENSMUST00000057653 1249 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Ccdc60Q8C4J0 Smim11-201ENSMUST00000063641 517 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Ccdc60Q8C4J0 Dhx9-202ENSMUST00000186380 4561 ntAPPRIS P2 TSL 2 BASIC17.5■□□□□ 0.39
Ccdc60Q8C4J0 Tmem251-201ENSMUST00000057416 3367 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Ccdc60Q8C4J0 Chtop-206ENSMUST00000107344 2972 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Ccdc60Q8C4J0 E430024P14Rik-203ENSMUST00000160545 2833 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Ccdc60Q8C4J0 4731419I09Rik-201ENSMUST00000180791 2820 ntTSL 2 BASIC17.5■□□□□ 0.39
Ccdc60Q8C4J0 Gtf3c5-202ENSMUST00000113889 2667 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Ccdc60Q8C4J0 Myef2-207ENSMUST00000147105 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Ccdc60Q8C4J0 Prr33-201ENSMUST00000054910 2251 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Ccdc60Q8C4J0 Foxo4-201ENSMUST00000062000 3162 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Ccdc60Q8C4J0 Mfsd1-201ENSMUST00000029344 3011 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Ccdc60Q8C4J0 Knop1-203ENSMUST00000106549 1467 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Ccdc60Q8C4J0 Tcf25-208ENSMUST00000212571 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Ccdc60Q8C4J0 Wdr5-201ENSMUST00000113952 2890 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Ccdc60Q8C4J0 Nek6-203ENSMUST00000112902 3147 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Ccdc60Q8C4J0 Plcd1-203ENSMUST00000214470 2706 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Ccdc60Q8C4J0 Gm20488-201ENSMUST00000201641 2996 ntTSL 2 BASIC17.49■□□□□ 0.39
Ccdc60Q8C4J0 Gm9742-201ENSMUST00000165220 1553 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Ccdc60Q8C4J0 Xkr5-202ENSMUST00000095438 2838 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Ccdc60Q8C4J0 Lrrc8a-202ENSMUST00000113654 4194 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
Ccdc60Q8C4J0 Caprin2-202ENSMUST00000111569 3697 ntAPPRIS P2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Ccdc60Q8C4J0 Gpsm1-204ENSMUST00000114134 2043 ntTSL 3 BASIC17.49■□□□□ 0.39
Ccdc60Q8C4J0 Kcnh2-201ENSMUST00000036092 4221 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Ccdc60Q8C4J0 Ccdc160-201ENSMUST00000101588 1536 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Ccdc60Q8C4J0 Mrpl53-201ENSMUST00000113938 695 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Ccdc60Q8C4J0 Gm14730-201ENSMUST00000122378 1045 ntBASIC17.49■□□□□ 0.39
Ccdc60Q8C4J0 Gm15917-201ENSMUST00000162771 487 ntTSL 2 BASIC17.49■□□□□ 0.39
Ccdc60Q8C4J0 Ift27-201ENSMUST00000016781 1012 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Ccdc60Q8C4J0 Gm7498-201ENSMUST00000203282 1084 ntBASIC17.49■□□□□ 0.39
Ccdc60Q8C4J0 Gm44719-201ENSMUST00000206404 149 ntBASIC17.49■□□□□ 0.39
Ccdc60Q8C4J0 AC135669.1-201ENSMUST00000213585 412 ntBASIC17.49■□□□□ 0.39
Ccdc60Q8C4J0 Prss41-201ENSMUST00000024926 1128 ntAPPRIS P2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Ccdc60Q8C4J0 Taf11-201ENSMUST00000025057 1220 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Ccdc60Q8C4J0 Uqcr10-201ENSMUST00000058407 434 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Ccdc60Q8C4J0 Slc25a37-201ENSMUST00000037064 4174 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Ccdc60Q8C4J0 Map2k7-203ENSMUST00000110994 1600 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Ccdc60Q8C4J0 Fbxw7-204ENSMUST00000107679 4473 ntAPPRIS ALT1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Ccdc60Q8C4J0 Atg16l1-201ENSMUST00000027512 3130 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
Ccdc60Q8C4J0 Camk2d-206ENSMUST00000106402 4180 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Ccdc60Q8C4J0 H3f3b-202ENSMUST00000106454 2514 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
Ccdc60Q8C4J0 Ypel3-203ENSMUST00000106357 1594 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Ccdc60Q8C4J0 Pltp-203ENSMUST00000109317 1575 ntTSL 5 BASIC17.49■□□□□ 0.39
Ccdc60Q8C4J0 Entpd2-201ENSMUST00000028328 1935 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Ccdc60Q8C4J0 Arid4b-203ENSMUST00000110534 5864 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Ccdc60Q8C4J0 Ubxn4-201ENSMUST00000027592 4113 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Ccdc60Q8C4J0 Pgm2-201ENSMUST00000058351 2371 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Ccdc60Q8C4J0 Iqcm-203ENSMUST00000212704 2035 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Ccdc60Q8C4J0 Rhpn2-201ENSMUST00000032705 3508 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Ccdc60Q8C4J0 Rbm47-206ENSMUST00000200775 3180 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
Ccdc60Q8C4J0 Eif1ad-201ENSMUST00000025759 2469 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Ccdc60Q8C4J0 Emb-201ENSMUST00000022242 2923 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Ccdc60Q8C4J0 Vash1-201ENSMUST00000021681 2599 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Ccdc60Q8C4J0 Gucy1a2-201ENSMUST00000115733 2243 ntAPPRIS P1 TSL 2 BASIC17.48■□□□□ 0.39
Ccdc60Q8C4J0 Sufu-203ENSMUST00000118440 2663 ntTSL 5 BASIC17.48■□□□□ 0.39
Ccdc60Q8C4J0 Tdrd6-201ENSMUST00000045717 7055 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
Ccdc60Q8C4J0 Sgce-207ENSMUST00000126151 1522 ntTSL 5 BASIC17.48■□□□□ 0.39
Ccdc60Q8C4J0 Gif-201ENSMUST00000025585 1537 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Ccdc60Q8C4J0 Mcm9-206ENSMUST00000220007 3513 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Ccdc60Q8C4J0 Dnajc6-205ENSMUST00000106933 5191 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
Ccdc60Q8C4J0 Mbd3-202ENSMUST00000105347 914 ntTSL 2 BASIC17.48■□□□□ 0.39
Ccdc60Q8C4J0 Ldha-ps-201ENSMUST00000119390 995 ntBASIC17.48■□□□□ 0.39
Ccdc60Q8C4J0 Gm15376-201ENSMUST00000122258 783 ntBASIC17.48■□□□□ 0.39
Ccdc60Q8C4J0 Xrcc2-204ENSMUST00000134972 464 ntTSL 3 BASIC17.48■□□□□ 0.39
Ccdc60Q8C4J0 Ptgr2-205ENSMUST00000135001 1286 ntTSL 5 BASIC17.48■□□□□ 0.39
Ccdc60Q8C4J0 Cyba-201ENSMUST00000017604 744 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Ccdc60Q8C4J0 Gm5354-201ENSMUST00000182417 973 ntBASIC17.48■□□□□ 0.39
Ccdc60Q8C4J0 Lce1j-202ENSMUST00000186525 703 ntAPPRIS P1 TSL 3 BASIC17.48■□□□□ 0.39
Ccdc60Q8C4J0 Gm28631-201ENSMUST00000190740 334 ntBASIC17.48■□□□□ 0.39
Ccdc60Q8C4J0 Mpc1-201ENSMUST00000046754 920 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
Ccdc60Q8C4J0 Emd-203ENSMUST00000096424 896 ntTSL 5 BASIC17.48■□□□□ 0.39
Ccdc60Q8C4J0 Adam23-205ENSMUST00000114107 6110 ntAPPRIS ALT2 TSL 5 BASIC17.48■□□□□ 0.39
Ccdc60Q8C4J0 Gm13127-201ENSMUST00000118978 1389 ntBASIC17.48■□□□□ 0.39
Ccdc60Q8C4J0 Gm38042-201ENSMUST00000191614 5208 ntBASIC17.48■□□□□ 0.39
Ccdc60Q8C4J0 Gm16534-201ENSMUST00000149300 1492 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Ccdc60Q8C4J0 Tcirg1-201ENSMUST00000001801 2688 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Ccdc60Q8C4J0 Arhgef12-202ENSMUST00000165665 10752 ntAPPRIS P2 TSL 1 (best) BASIC17.48■□□□□ 0.39
Ccdc60Q8C4J0 Cog3-201ENSMUST00000049168 4222 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Ccdc60Q8C4J0 Psmd8-207ENSMUST00000209034 1983 ntTSL 2 BASIC17.48■□□□□ 0.39
Ccdc60Q8C4J0 Lrrc17-201ENSMUST00000035651 2154 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Ccdc60Q8C4J0 Aldh1a2-201ENSMUST00000034723 2264 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Ccdc60Q8C4J0 Peli1-201ENSMUST00000093290 3514 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Ccdc60Q8C4J0 Atxn7l1-202ENSMUST00000090597 2563 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Ccdc60Q8C4J0 Ate1-202ENSMUST00000035458 4685 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Ccdc60Q8C4J0 Rbm47-201ENSMUST00000094756 2973 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Ccdc60Q8C4J0 Gm35721-201ENSMUST00000220294 2014 ntTSL 5 BASIC17.47■□□□□ 0.39
Ccdc60Q8C4J0 Sema6d-208ENSMUST00000103241 6157 ntAPPRIS ALT2 TSL 5 BASIC17.47■□□□□ 0.39
Ccdc60Q8C4J0 Pja1-202ENSMUST00000113790 2108 ntAPPRIS ALT2 TSL 2 BASIC17.47■□□□□ 0.39
Ccdc60Q8C4J0 Rlbp1-201ENSMUST00000053718 2134 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Ccdc60Q8C4J0 Phka1-201ENSMUST00000043596 5938 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Ccdc60Q8C4J0 Zfp553-202ENSMUST00000106312 3342 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Ccdc60Q8C4J0 Stxbp1-202ENSMUST00000077458 3616 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Ccdc60Q8C4J0 Nedd8-201ENSMUST00000010520 824 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Ccdc60Q8C4J0 Prrx2-202ENSMUST00000113592 1070 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Ccdc60Q8C4J0 1700001C02Rik-203ENSMUST00000127815 660 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Ccdc60Q8C4J0 Il11-202ENSMUST00000163481 990 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Ccdc60Q8C4J0 Calhm3-201ENSMUST00000178630 1044 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
Ccdc60Q8C4J0 1700080E11Rik-202ENSMUST00000190661 682 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Retrieved 100 of 76,532 protein–RNA pairs in 35.6 ms