Protein–RNA interactions for Protein: Q8C2A2

Tsen54, tRNA-splicing endonuclease subunit Sen54, mousemouse

Predictions only

Length 525 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tsen54Q8C2A2 Slc39a8-206ENSMUST00000180196 3383 ntAPPRIS P1 TSL 5 BASIC11.49□□□□□ -0.57
Tsen54Q8C2A2 Shroom1-201ENSMUST00000018531 2630 ntAPPRIS ALT2 TSL 1 (best) BASIC11.49□□□□□ -0.57
Tsen54Q8C2A2 Gm8281-202ENSMUST00000163719 1954 ntAPPRIS P1 TSL 5 BASIC11.49□□□□□ -0.57
Tsen54Q8C2A2 Gm26576-201ENSMUST00000181018 1977 ntTSL 5 BASIC11.49□□□□□ -0.57
Tsen54Q8C2A2 Ntm-203ENSMUST00000115237 2039 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Tsen54Q8C2A2 Gm8749-201ENSMUST00000117737 331 ntBASIC11.49□□□□□ -0.57
Tsen54Q8C2A2 Gm11594-201ENSMUST00000122313 162 ntBASIC11.49□□□□□ -0.57
Tsen54Q8C2A2 Tsen15-205ENSMUST00000162371 431 ntTSL 5 BASIC11.49□□□□□ -0.57
Tsen54Q8C2A2 1600014C10Rik-207ENSMUST00000179503 784 ntTSL 5 BASIC11.49□□□□□ -0.57
Tsen54Q8C2A2 Ccnd3-208ENSMUST00000182539 931 ntTSL 2 BASIC11.49□□□□□ -0.57
Tsen54Q8C2A2 Gm5177-201ENSMUST00000183092 997 ntBASIC11.49□□□□□ -0.57
Tsen54Q8C2A2 Gm27301-201ENSMUST00000184012 127 ntBASIC11.49□□□□□ -0.57
Tsen54Q8C2A2 Gm27244-201ENSMUST00000184260 380 ntTSL 5 BASIC11.49□□□□□ -0.57
Tsen54Q8C2A2 A430093F15Rik-205ENSMUST00000188480 509 ntTSL 3 BASIC11.49□□□□□ -0.57
Tsen54Q8C2A2 Gm45706-201ENSMUST00000213063 2136 ntBASIC11.49□□□□□ -0.57
Tsen54Q8C2A2 Vkorc1-201ENSMUST00000033074 748 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Tsen54Q8C2A2 Fam43a-201ENSMUST00000059078 3075 ntAPPRIS P1 BASIC11.49□□□□□ -0.57
Tsen54Q8C2A2 1500011B03Rik-202ENSMUST00000112160 1333 ntAPPRIS ALT2 TSL 1 (best) BASIC11.49□□□□□ -0.57
Tsen54Q8C2A2 Mtus2-203ENSMUST00000085558 7543 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Tsen54Q8C2A2 Cyp20a1-201ENSMUST00000060608 2223 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Tsen54Q8C2A2 Asph-202ENSMUST00000078139 6694 ntAPPRIS P3 TSL 1 (best) BASIC11.49□□□□□ -0.57
Tsen54Q8C2A2 Nr1i3-203ENSMUST00000111328 1359 ntAPPRIS ALT2 TSL 1 (best) BASIC11.49□□□□□ -0.57
Tsen54Q8C2A2 Kcnq2-208ENSMUST00000103051 4200 ntAPPRIS ALT2 TSL 5 BASIC11.49□□□□□ -0.57
Tsen54Q8C2A2 Kif1a-210ENSMUST00000190723 6141 ntTSL 5 BASIC11.49□□□□□ -0.57
Tsen54Q8C2A2 Daglb-201ENSMUST00000045593 4651 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Tsen54Q8C2A2 Gm13344-201ENSMUST00000137714 1557 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Tsen54Q8C2A2 Arhgap35-202ENSMUST00000171937 6251 ntAPPRIS P1 TSL 5 BASIC11.49□□□□□ -0.57
Tsen54Q8C2A2 Itgal-201ENSMUST00000106306 5195 ntAPPRIS P4 TSL 1 (best) BASIC11.49□□□□□ -0.57
Tsen54Q8C2A2 Zfp853-202ENSMUST00000212355 2871 ntAPPRIS P5 TSL 5 BASIC11.49□□□□□ -0.57
Tsen54Q8C2A2 Nepn-201ENSMUST00000067085 1844 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Tsen54Q8C2A2 Prnd-203ENSMUST00000110171 1938 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Tsen54Q8C2A2 Ddx31-201ENSMUST00000113853 3271 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Tsen54Q8C2A2 Lca5-202ENSMUST00000034793 2001 ntAPPRIS ALT2 TSL 1 (best) BASIC11.48□□□□□ -0.57
Tsen54Q8C2A2 Ttbk1-203ENSMUST00000225808 8926 ntAPPRIS ALT2 BASIC11.48□□□□□ -0.57
Tsen54Q8C2A2 Gne-209ENSMUST00000173234 2149 ntTSL 5 BASIC11.48□□□□□ -0.57
Tsen54Q8C2A2 2610011E03Rik-201ENSMUST00000200128 2235 ntBASIC11.48□□□□□ -0.57
Tsen54Q8C2A2 Cap2-201ENSMUST00000021802 3713 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Tsen54Q8C2A2 Muc20-201ENSMUST00000041123 2299 ntAPPRIS ALT2 TSL 1 (best) BASIC11.48□□□□□ -0.57
Tsen54Q8C2A2 Pdxk-ps-201ENSMUST00000159650 2342 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Tsen54Q8C2A2 Dmtn-208ENSMUST00000228009 2643 ntAPPRIS P2 BASIC11.48□□□□□ -0.57
Tsen54Q8C2A2 Snx13-201ENSMUST00000048519 6231 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Tsen54Q8C2A2 Otud7b-201ENSMUST00000035519 8043 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Tsen54Q8C2A2 Slc35e2-202ENSMUST00000105608 6291 ntAPPRIS P1 TSL 5 BASIC11.48□□□□□ -0.57
Tsen54Q8C2A2 Acox3-204ENSMUST00000114238 2825 ntAPPRIS ALT2 TSL 1 (best) BASIC11.48□□□□□ -0.57
Tsen54Q8C2A2 Btrc-201ENSMUST00000065601 2978 ntAPPRIS P3 TSL 1 (best) BASIC11.48□□□□□ -0.57
Tsen54Q8C2A2 Pdcd6ip-202ENSMUST00000111861 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC11.48□□□□□ -0.57
Tsen54Q8C2A2 Zscan20-202ENSMUST00000097877 5364 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Tsen54Q8C2A2 Dnajc8-206ENSMUST00000105940 772 ntTSL 5 BASIC11.48□□□□□ -0.57
Tsen54Q8C2A2 Adgrv1-205ENSMUST00000126444 3823 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Tsen54Q8C2A2 1810062O18Rik-203ENSMUST00000129237 647 ntTSL 5 BASIC11.48□□□□□ -0.57
Tsen54Q8C2A2 Pcp2-204ENSMUST00000136105 504 ntAPPRIS P4 TSL 1 (best) BASIC11.48□□□□□ -0.57
Tsen54Q8C2A2 Rpl26-206ENSMUST00000167436 606 ntAPPRIS P2 TSL 1 (best) BASIC11.48□□□□□ -0.57
Tsen54Q8C2A2 Ccer2-201ENSMUST00000178767 1054 ntAPPRIS P1 TSL 5 BASIC11.48□□□□□ -0.57
Tsen54Q8C2A2 5430405H02Rik-203ENSMUST00000185402 904 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Tsen54Q8C2A2 Gm36972-201ENSMUST00000194000 676 ntTSL 3 BASIC11.48□□□□□ -0.57
Tsen54Q8C2A2 9230114J08Rik-201ENSMUST00000200375 350 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Tsen54Q8C2A2 Thap2-203ENSMUST00000218989 527 ntBASIC11.48□□□□□ -0.57
Tsen54Q8C2A2 Ndufaf2-202ENSMUST00000223734 556 ntBASIC11.48□□□□□ -0.57
Tsen54Q8C2A2 Cox7a2l-201ENSMUST00000025095 1078 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Tsen54Q8C2A2 Rit1-201ENSMUST00000029692 1204 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Tsen54Q8C2A2 Eif5a-203ENSMUST00000071026 1286 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Tsen54Q8C2A2 Slbp-202ENSMUST00000075670 1027 ntAPPRIS ALT2 TSL 1 (best) BASIC11.48□□□□□ -0.57
Tsen54Q8C2A2 Pard6a-202ENSMUST00000098444 1273 ntTSL 2 BASIC11.48□□□□□ -0.57
Tsen54Q8C2A2 Six4-202ENSMUST00000175693 6817 ntAPPRIS ALT2 TSL 5 BASIC11.48□□□□□ -0.57
Tsen54Q8C2A2 Mettl27-203ENSMUST00000111218 1387 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Tsen54Q8C2A2 Susd3-202ENSMUST00000058196 1418 ntAPPRIS P3 TSL 1 (best) BASIC11.48□□□□□ -0.57
Tsen54Q8C2A2 Arhgap8-205ENSMUST00000168811 1464 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Tsen54Q8C2A2 Fn1-216ENSMUST00000189821 7410 ntAPPRIS ALT2 TSL 1 (best) BASIC11.48□□□□□ -0.57
Tsen54Q8C2A2 Nfic-207ENSMUST00000221817 1531 ntTSL 5 BASIC11.48□□□□□ -0.57
Tsen54Q8C2A2 Gjb1-203ENSMUST00000119190 1585 ntAPPRIS P1 TSL 2 BASIC11.48□□□□□ -0.57
Tsen54Q8C2A2 Galt-201ENSMUST00000084695 1595 ntAPPRIS P2 TSL 1 (best) BASIC11.48□□□□□ -0.57
Tsen54Q8C2A2 AI661453-202ENSMUST00000150819 4866 ntAPPRIS P2 TSL 5 BASIC11.48□□□□□ -0.57
Tsen54Q8C2A2 Blzf1-202ENSMUST00000086032 1602 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Tsen54Q8C2A2 Rpa2-201ENSMUST00000102561 1813 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Tsen54Q8C2A2 Cenpt-201ENSMUST00000040776 1814 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Tsen54Q8C2A2 Gm5096-201ENSMUST00000091776 1858 ntAPPRIS P1 BASIC11.48□□□□□ -0.57
Tsen54Q8C2A2 Ecm1-202ENSMUST00000117507 1900 ntAPPRIS P3 TSL 1 (best) BASIC11.48□□□□□ -0.57
Tsen54Q8C2A2 Vcpip1-201ENSMUST00000057438 9749 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Tsen54Q8C2A2 Pde4d-203ENSMUST00000117420 1955 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Tsen54Q8C2A2 Mcpt9-201ENSMUST00000095798 2000 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Tsen54Q8C2A2 Mbp-207ENSMUST00000114674 2108 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Tsen54Q8C2A2 Krba1-203ENSMUST00000114571 6695 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Tsen54Q8C2A2 Wwox-201ENSMUST00000004756 2244 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Tsen54Q8C2A2 Ap4e1-203ENSMUST00000110394 2271 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Tsen54Q8C2A2 Rhobtb1-210ENSMUST00000167384 2331 ntTSL 5 BASIC11.48□□□□□ -0.57
Tsen54Q8C2A2 Ccdc162-208ENSMUST00000179614 2739 ntTSL 5 BASIC11.48□□□□□ -0.57
Tsen54Q8C2A2 Gm20633-201ENSMUST00000176742 2831 ntBASIC11.48□□□□□ -0.57
Tsen54Q8C2A2 Dars2-201ENSMUST00000035430 3619 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Tsen54Q8C2A2 Pcdh10-203ENSMUST00000171554 7273 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Tsen54Q8C2A2 Il13ra1-201ENSMUST00000033418 3712 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Tsen54Q8C2A2 B230206H07Rik-202ENSMUST00000134845 3269 ntTSL 5 BASIC11.47□□□□□ -0.57
Tsen54Q8C2A2 Fam160a2-202ENSMUST00000074686 3212 ntAPPRIS ALT2 TSL 5 BASIC11.47□□□□□ -0.57
Tsen54Q8C2A2 4931414P19Rik-201ENSMUST00000022786 2670 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Tsen54Q8C2A2 Nars-201ENSMUST00000025483 2632 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Tsen54Q8C2A2 Pex12-207ENSMUST00000176518 2501 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Tsen54Q8C2A2 Atp6ap1-202ENSMUST00000114171 2157 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Tsen54Q8C2A2 Gm14342-201ENSMUST00000137629 2119 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Tsen54Q8C2A2 Hadhb-203ENSMUST00000114786 2048 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Tsen54Q8C2A2 Eif5-201ENSMUST00000050993 1969 ntAPPRIS P2 TSL 1 (best) BASIC11.47□□□□□ -0.57
Tsen54Q8C2A2 Nup160-201ENSMUST00000057481 5684 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Retrieved 100 of 76,532 protein–RNA pairs in 42.1 ms