Protein–RNA interactions for Protein: Q8C263

Ska3, Spindle and kinetochore-associated protein 3, mousemouse

Predictions only

Length 411 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ska3Q8C263 Trim52-201ENSMUST00000022708 3075 ntAPPRIS P1 BASIC12.93□□□□□ -0.34
Ska3Q8C263 Angel2-202ENSMUST00000066632 3714 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Ska3Q8C263 Skida1-202ENSMUST00000091420 4376 ntAPPRIS P2 TSL 5 BASIC12.93□□□□□ -0.34
Ska3Q8C263 Abr-205ENSMUST00000108408 3534 ntTSL 5 BASIC12.93□□□□□ -0.34
Ska3Q8C263 Lpar1-201ENSMUST00000055018 3512 ntAPPRIS P3 TSL 1 (best) BASIC12.93□□□□□ -0.34
Ska3Q8C263 Gatd1-201ENSMUST00000106008 1898 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Ska3Q8C263 Aldh3b1-201ENSMUST00000051803 1875 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Ska3Q8C263 Hmgb3-201ENSMUST00000015361 1544 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Ska3Q8C263 Fmnl2-205ENSMUST00000155586 3939 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Ska3Q8C263 Ces2f-201ENSMUST00000076384 1823 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Ska3Q8C263 Hcn3-201ENSMUST00000029686 4002 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Ska3Q8C263 Bbs5-201ENSMUST00000074963 1468 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Ska3Q8C263 Gm14452-201ENSMUST00000118680 1632 ntBASIC12.92□□□□□ -0.34
Ska3Q8C263 Slc6a7-201ENSMUST00000025520 3342 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Ska3Q8C263 Hnrnpa1-201ENSMUST00000036004 1918 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Ska3Q8C263 Hsd17b11-202ENSMUST00000119025 2234 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Ska3Q8C263 Rnf114-201ENSMUST00000078050 2502 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Ska3Q8C263 Galnt17-201ENSMUST00000086023 8040 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Ska3Q8C263 Pde4dip-205ENSMUST00000168438 8264 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Ska3Q8C263 Sgo2a-201ENSMUST00000027202 4939 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Ska3Q8C263 Dhrs3-202ENSMUST00000105744 1226 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Ska3Q8C263 Shf-202ENSMUST00000110530 910 ntAPPRIS ALT2 TSL 5 BASIC12.92□□□□□ -0.34
Ska3Q8C263 Tnk2-201ENSMUST00000115120 2794 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Ska3Q8C263 Ifnar2-203ENSMUST00000117836 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Ska3Q8C263 Gm12212-201ENSMUST00000141032 378 ntTSL 3 BASIC12.92□□□□□ -0.34
Ska3Q8C263 Gm14493-201ENSMUST00000141174 543 ntTSL 5 BASIC12.92□□□□□ -0.34
Ska3Q8C263 Prr29-203ENSMUST00000185986 983 ntAPPRIS ALT2 TSL 5 BASIC12.92□□□□□ -0.34
Ska3Q8C263 Haus5-201ENSMUST00000019697 2187 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Ska3Q8C263 Timm13-201ENSMUST00000020440 1225 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Ska3Q8C263 Ccnj-201ENSMUST00000025983 3819 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Ska3Q8C263 Mettl26-201ENSMUST00000026827 817 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Ska3Q8C263 Slc13a5-201ENSMUST00000021161 3329 ntAPPRIS P2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Ska3Q8C263 Tcirg1-211ENSMUST00000145791 2729 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Ska3Q8C263 Opa1-206ENSMUST00000160597 6230 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Ska3Q8C263 Slc35b1-201ENSMUST00000021243 1523 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Ska3Q8C263 Dnmt3b-203ENSMUST00000081628 4260 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Ska3Q8C263 Tmem169-201ENSMUST00000027380 2928 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Ska3Q8C263 Plekhb1-206ENSMUST00000107047 1926 ntAPPRIS ALT1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Ska3Q8C263 Cacng3-201ENSMUST00000084615 2777 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Ska3Q8C263 Mettl11b-201ENSMUST00000159679 1790 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Ska3Q8C263 Eml3-201ENSMUST00000096241 3322 ntAPPRIS P2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Ska3Q8C263 Camk2b-203ENSMUST00000066431 1603 ntAPPRIS ALT1 TSL 5 BASIC12.91□□□□□ -0.34
Ska3Q8C263 Ankrd6-204ENSMUST00000084750 4444 ntAPPRIS P2 TSL 5 BASIC12.91□□□□□ -0.34
Ska3Q8C263 Gm17029-202ENSMUST00000146124 2899 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Ska3Q8C263 5730409E04Rik-201ENSMUST00000097886 2886 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Ska3Q8C263 Kcnq2-207ENSMUST00000103050 2713 ntAPPRIS ALT2 TSL 5 BASIC12.91□□□□□ -0.34
Ska3Q8C263 Myt1l-204ENSMUST00000218198 2735 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Ska3Q8C263 Pik3ip1-201ENSMUST00000045153 2573 ntAPPRIS P2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Ska3Q8C263 Gtf2ird1-229ENSMUST00000202554 3514 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Ska3Q8C263 Osm-201ENSMUST00000075221 2272 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Ska3Q8C263 Egr2-203ENSMUST00000127820 2665 ntAPPRIS ALT2 TSL 5 BASIC12.91□□□□□ -0.34
Ska3Q8C263 Ino80-201ENSMUST00000049920 6354 ntAPPRIS P1 TSL 5 BASIC12.91□□□□□ -0.34
Ska3Q8C263 Syt1-201ENSMUST00000064054 4745 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Ska3Q8C263 Clstn2-202ENSMUST00000162295 4174 ntAPPRIS ALT2 TSL 5 BASIC12.91□□□□□ -0.34
Ska3Q8C263 Fktn-204ENSMUST00000221657 6241 ntTSL 5 BASIC12.91□□□□□ -0.34
Ska3Q8C263 Mtmr2-208ENSMUST00000155679 3088 ntTSL 5 BASIC12.91□□□□□ -0.34
Ska3Q8C263 Cul5-209ENSMUST00000166367 5942 ntTSL 5 BASIC12.91□□□□□ -0.34
Ska3Q8C263 Gm42872-201ENSMUST00000200026 1967 ntBASIC12.91□□□□□ -0.34
Ska3Q8C263 Lin54-208ENSMUST00000149714 3869 ntTSL 5 BASIC12.91□□□□□ -0.34
Ska3Q8C263 Dnmt3b-204ENSMUST00000088976 4130 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Ska3Q8C263 Gm45799-201ENSMUST00000106785 367 ntAPPRIS ALT2 TSL 3 BASIC12.91□□□□□ -0.34
Ska3Q8C263 Gm15240-201ENSMUST00000118156 720 ntBASIC12.91□□□□□ -0.34
Ska3Q8C263 Chchd7-208ENSMUST00000121651 620 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Ska3Q8C263 Vps53-204ENSMUST00000129256 650 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Ska3Q8C263 Gm16215-201ENSMUST00000161990 637 ntBASIC12.91□□□□□ -0.34
Ska3Q8C263 Gm27437-201ENSMUST00000183429 107 ntBASIC12.91□□□□□ -0.34
Ska3Q8C263 Gm18905-201ENSMUST00000205454 928 ntBASIC12.91□□□□□ -0.34
Ska3Q8C263 Gm44719-201ENSMUST00000206404 149 ntBASIC12.91□□□□□ -0.34
Ska3Q8C263 Gm7730-201ENSMUST00000212486 454 ntBASIC12.91□□□□□ -0.34
Ska3Q8C263 Chchd7-201ENSMUST00000041122 672 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Ska3Q8C263 Sned1-201ENSMUST00000062202 9147 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Ska3Q8C263 Ccdc151-201ENSMUST00000044926 2197 ntAPPRIS P3 TSL 1 (best) BASIC12.91□□□□□ -0.34
Ska3Q8C263 Ablim1-202ENSMUST00000099294 6232 ntAPPRIS ALT2 TSL 5 BASIC12.91□□□□□ -0.34
Ska3Q8C263 2900005J15Rik-202ENSMUST00000171190 2025 ntBASIC12.91□□□□□ -0.34
Ska3Q8C263 Zfp146-201ENSMUST00000062181 2029 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Ska3Q8C263 Mvk-202ENSMUST00000112239 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Ska3Q8C263 Cfp-201ENSMUST00000001156 1636 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Ska3Q8C263 Zfp647-201ENSMUST00000048854 1608 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Ska3Q8C263 Rnf185-201ENSMUST00000064364 2906 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Ska3Q8C263 Sall4-202ENSMUST00000075044 2534 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Ska3Q8C263 Mocs2-208ENSMUST00000166176 1855 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Ska3Q8C263 Slc38a1-201ENSMUST00000088452 7266 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Ska3Q8C263 Nbeal2-206ENSMUST00000133191 8782 ntAPPRIS ALT2 TSL 5 BASIC12.91□□□□□ -0.34
Ska3Q8C263 Alkbh4-202ENSMUST00000100568 1714 ntAPPRIS P3 TSL 1 (best) BASIC12.91□□□□□ -0.34
Ska3Q8C263 Ppt2-201ENSMUST00000064953 1729 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Ska3Q8C263 Eif3j1-201ENSMUST00000028668 5413 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Ska3Q8C263 Zmym4-201ENSMUST00000106108 7102 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Ska3Q8C263 Mctp1-204ENSMUST00000125209 4715 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Ska3Q8C263 Gm42690-201ENSMUST00000197921 1836 ntBASIC12.9□□□□□ -0.34
Ska3Q8C263 Dmkn-205ENSMUST00000165887 2063 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Ska3Q8C263 Mrps30-201ENSMUST00000022245 3319 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Ska3Q8C263 Ecm1-202ENSMUST00000117507 1900 ntAPPRIS P3 TSL 1 (best) BASIC12.9□□□□□ -0.34
Ska3Q8C263 Gm13883-201ENSMUST00000150450 1404 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Ska3Q8C263 Snx22-201ENSMUST00000044711 2543 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Ska3Q8C263 Acot6-202ENSMUST00000222921 3622 ntBASIC12.9□□□□□ -0.34
Ska3Q8C263 Gm43796-201ENSMUST00000202853 2012 ntAPPRIS P1 TSL 5 BASIC12.9□□□□□ -0.34
Ska3Q8C263 5730409E04Rik-202ENSMUST00000164362 2855 ntAPPRIS P1 TSL 3 BASIC12.9□□□□□ -0.34
Ska3Q8C263 Ccp110-202ENSMUST00000106557 5073 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Ska3Q8C263 Ccdc69-202ENSMUST00000108880 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Ska3Q8C263 Gfpt1-203ENSMUST00000113657 1200 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Retrieved 100 of 76,532 protein–RNA pairs in 34.5 ms