Protein–RNA interactions for Protein: Q8BQM7

Smco3, Single-pass membrane and coiled-coil domain-containing protein 3, mousemouse

Predictions only

Length 225 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smco3Q8BQM7 Gm13848-201ENSMUST00000130777 2047 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Smco3Q8BQM7 9230110C19Rik-201ENSMUST00000065291 1592 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Smco3Q8BQM7 Gm42957-201ENSMUST00000137564 3624 ntAPPRIS P1 TSL 2 BASIC11.3□□□□□ -0.6
Smco3Q8BQM7 Bcl7b-203ENSMUST00000111188 1434 ntAPPRIS ALT1 TSL 5 BASIC11.3□□□□□ -0.6
Smco3Q8BQM7 Tmub2-205ENSMUST00000156326 2249 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Smco3Q8BQM7 Pgghg-204ENSMUST00000164580 3001 ntAPPRIS ALT2 TSL 5 BASIC11.3□□□□□ -0.6
Smco3Q8BQM7 Ighv4-1-201ENSMUST00000103464 414 ntAPPRIS P1 BASIC11.3□□□□□ -0.6
Smco3Q8BQM7 Dnajc8-206ENSMUST00000105940 772 ntTSL 5 BASIC11.3□□□□□ -0.6
Smco3Q8BQM7 Fam53b-204ENSMUST00000106165 1232 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Smco3Q8BQM7 Fam53b-205ENSMUST00000106166 1270 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Smco3Q8BQM7 Nosip-202ENSMUST00000107829 972 ntAPPRIS ALT2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Smco3Q8BQM7 Bpifa3-202ENSMUST00000109746 1102 ntAPPRIS ALT2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Smco3Q8BQM7 Gm6184-201ENSMUST00000120403 1261 ntBASIC11.3□□□□□ -0.6
Smco3Q8BQM7 Mocs1-202ENSMUST00000165390 729 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Smco3Q8BQM7 Gm20680-201ENSMUST00000176881 789 ntTSL 5 BASIC11.3□□□□□ -0.6
Smco3Q8BQM7 Gm21887-202ENSMUST00000179760 483 ntAPPRIS ALT2 TSL 5 BASIC11.3□□□□□ -0.6
Smco3Q8BQM7 Eif3h-201ENSMUST00000022925 1295 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Smco3Q8BQM7 Olfr30-201ENSMUST00000055204 1066 ntAPPRIS P1 BASIC11.3□□□□□ -0.6
Smco3Q8BQM7 Tsr3-201ENSMUST00000063574 1192 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Smco3Q8BQM7 Gfra4-202ENSMUST00000066958 783 ntAPPRIS ALT2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Smco3Q8BQM7 Cers6-201ENSMUST00000028426 7038 ntAPPRIS P3 TSL 1 (best) BASIC11.3□□□□□ -0.6
Smco3Q8BQM7 Gdf6-201ENSMUST00000057613 3532 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Smco3Q8BQM7 Il18r1-203ENSMUST00000167723 1919 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Smco3Q8BQM7 Rpap1-203ENSMUST00000110793 5458 ntAPPRIS P1 TSL 5 BASIC11.3□□□□□ -0.6
Smco3Q8BQM7 Hoxd3-202ENSMUST00000111982 2413 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Smco3Q8BQM7 Golim4-208ENSMUST00000167078 2902 ntAPPRIS P3 TSL 1 (best) BASIC11.3□□□□□ -0.6
Smco3Q8BQM7 Rnf4-204ENSMUST00000182047 2944 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Smco3Q8BQM7 4933416C03Rik-201ENSMUST00000099261 2254 ntAPPRIS P1 BASIC11.3□□□□□ -0.6
Smco3Q8BQM7 Muc6-202ENSMUST00000189314 5087 ntAPPRIS ALT2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Smco3Q8BQM7 Ifnz-201ENSMUST00000105144 1462 ntAPPRIS P1 BASIC11.3□□□□□ -0.6
Smco3Q8BQM7 Ahsg-201ENSMUST00000023583 1474 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Smco3Q8BQM7 Itgb4-204ENSMUST00000106460 5919 ntAPPRIS ALT2 TSL 5 BASIC11.3□□□□□ -0.6
Smco3Q8BQM7 Gm15082-201ENSMUST00000147045 1960 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Smco3Q8BQM7 Esrrb-206ENSMUST00000167891 1344 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Smco3Q8BQM7 4930528D03Rik-201ENSMUST00000181528 1339 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Smco3Q8BQM7 Psmb10-201ENSMUST00000034369 1311 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Smco3Q8BQM7 Asb3-206ENSMUST00000203878 1813 ntAPPRIS ALT2 TSL 5 BASIC11.3□□□□□ -0.6
Smco3Q8BQM7 Ptp4a3-202ENSMUST00000163582 3808 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Smco3Q8BQM7 Ddx27-205ENSMUST00000150571 2151 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Smco3Q8BQM7 Retreg1-202ENSMUST00000110438 1526 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Smco3Q8BQM7 Szrd1-203ENSMUST00000102487 3244 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Smco3Q8BQM7 Capn5-202ENSMUST00000107112 2232 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Smco3Q8BQM7 Wdr17-211ENSMUST00000175915 4619 ntAPPRIS ALT2 TSL 5 BASIC11.29□□□□□ -0.6
Smco3Q8BQM7 Zfp583-201ENSMUST00000062765 2550 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Smco3Q8BQM7 Ybx2-202ENSMUST00000108601 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC11.29□□□□□ -0.6
Smco3Q8BQM7 Kpna1-201ENSMUST00000004054 5039 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Smco3Q8BQM7 Psmd2-201ENSMUST00000007212 2961 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Smco3Q8BQM7 Numa1-201ENSMUST00000084852 7180 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Smco3Q8BQM7 Gm26604-201ENSMUST00000180926 1766 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Smco3Q8BQM7 Pisd-202ENSMUST00000071829 1986 ntTSL 5 BASIC11.29□□□□□ -0.6
Smco3Q8BQM7 Dlgap1-208ENSMUST00000135938 2895 ntAPPRIS ALT2 TSL 1 (best) BASIC11.29□□□□□ -0.6
Smco3Q8BQM7 Ebf1-202ENSMUST00000101326 3422 ntAPPRIS ALT1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Smco3Q8BQM7 Gamt-202ENSMUST00000105363 988 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Smco3Q8BQM7 Mdfi-203ENSMUST00000113280 1281 ntTSL 5 BASIC11.29□□□□□ -0.6
Smco3Q8BQM7 Speg-202ENSMUST00000113587 1254 ntTSL 5 BASIC11.29□□□□□ -0.6
Smco3Q8BQM7 Rasl2-9-201ENSMUST00000147835 1013 ntAPPRIS P1 BASIC11.29□□□□□ -0.6
Smco3Q8BQM7 Slc36a3os-201ENSMUST00000155883 520 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Smco3Q8BQM7 Nat8b-ps-201ENSMUST00000162660 699 ntBASIC11.29□□□□□ -0.6
Smco3Q8BQM7 Gm42413-201ENSMUST00000196216 338 ntTSL 5 BASIC11.29□□□□□ -0.6
Smco3Q8BQM7 Gm38973-201ENSMUST00000206810 878 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Smco3Q8BQM7 Mrps18a-201ENSMUST00000024763 884 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Smco3Q8BQM7 1700080E11Rik-201ENSMUST00000035180 883 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Smco3Q8BQM7 Aurkaip1-201ENSMUST00000084097 1159 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Smco3Q8BQM7 Litaf-201ENSMUST00000023143 2235 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Smco3Q8BQM7 Hcrtr1-202ENSMUST00000119423 2439 ntAPPRIS P1 TSL 5 BASIC11.29□□□□□ -0.6
Smco3Q8BQM7 Usp19-210ENSMUST00000193678 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC11.29□□□□□ -0.6
Smco3Q8BQM7 Adgrl3-201ENSMUST00000036068 6203 ntAPPRIS ALT2 TSL 5 BASIC11.29□□□□□ -0.6
Smco3Q8BQM7 Adgrl3-202ENSMUST00000072521 6203 ntAPPRIS P3 TSL 5 BASIC11.29□□□□□ -0.6
Smco3Q8BQM7 Tmem215-202ENSMUST00000179526 2276 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Smco3Q8BQM7 Prr33-201ENSMUST00000054910 2251 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Smco3Q8BQM7 Cnih1-201ENSMUST00000015903 1538 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Smco3Q8BQM7 Acbd5-208ENSMUST00000226571 3802 ntAPPRIS ALT2 BASIC11.29□□□□□ -0.6
Smco3Q8BQM7 Hoxd3os1-202ENSMUST00000139005 1701 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Smco3Q8BQM7 4931440F15Rik-201ENSMUST00000104962 3274 ntAPPRIS P1 BASIC11.29□□□□□ -0.6
Smco3Q8BQM7 Lrriq1-203ENSMUST00000166240 5232 ntAPPRIS P1 TSL 5 BASIC11.29□□□□□ -0.6
Smco3Q8BQM7 Chrna10-201ENSMUST00000084830 2513 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Smco3Q8BQM7 F2-202ENSMUST00000111335 1969 ntAPPRIS ALT2 TSL 5 BASIC11.28□□□□□ -0.6
Smco3Q8BQM7 Emc3-201ENSMUST00000032425 1985 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Smco3Q8BQM7 Klhl3-202ENSMUST00000160860 7149 ntAPPRIS P1 TSL 5 BASIC11.28□□□□□ -0.6
Smco3Q8BQM7 Inpp4b-215ENSMUST00000217122 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC11.28□□□□□ -0.6
Smco3Q8BQM7 Kdm2b-202ENSMUST00000046073 5180 ntAPPRIS P2 TSL 1 (best) BASIC11.28□□□□□ -0.6
Smco3Q8BQM7 Dcc-202ENSMUST00000114943 5219 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Smco3Q8BQM7 Zfp467-206ENSMUST00000114561 3619 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Smco3Q8BQM7 Micu1-204ENSMUST00000165563 2442 ntAPPRIS P3 TSL 1 (best) BASIC11.28□□□□□ -0.6
Smco3Q8BQM7 AC164702.1-201ENSMUST00000220135 2212 ntBASIC11.28□□□□□ -0.6
Smco3Q8BQM7 Nexmif-203ENSMUST00000118314 11476 ntAPPRIS ALT2 TSL 1 (best) BASIC11.28□□□□□ -0.6
Smco3Q8BQM7 G3bp2-209ENSMUST00000202258 1884 ntAPPRIS P3 TSL 1 (best) BASIC11.28□□□□□ -0.6
Smco3Q8BQM7 Epha5-202ENSMUST00000113398 4830 ntTSL 5 BASIC11.28□□□□□ -0.6
Smco3Q8BQM7 Preb-201ENSMUST00000074840 6300 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Smco3Q8BQM7 Zbtb6-202ENSMUST00000112932 5077 ntAPPRIS P1 TSL 2 BASIC11.28□□□□□ -0.6
Smco3Q8BQM7 Abca7-201ENSMUST00000043866 6590 ntAPPRIS P3 TSL 1 (best) BASIC11.28□□□□□ -0.6
Smco3Q8BQM7 Gm14964-202ENSMUST00000149574 716 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Smco3Q8BQM7 Gm16046-203ENSMUST00000150889 1001 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Smco3Q8BQM7 Gm16026-204ENSMUST00000162652 683 ntBASIC11.28□□□□□ -0.6
Smco3Q8BQM7 Ccnh-202ENSMUST00000163600 1055 ntTSL 5 BASIC11.28□□□□□ -0.6
Smco3Q8BQM7 Rps2-ps5-201ENSMUST00000184266 849 ntBASIC11.28□□□□□ -0.6
Smco3Q8BQM7 Gm45631-201ENSMUST00000210318 1244 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Smco3Q8BQM7 Zfp810-203ENSMUST00000215202 822 ntTSL 3 BASIC11.28□□□□□ -0.6
Smco3Q8BQM7 Lrr1-203ENSMUST00000222520 767 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Smco3Q8BQM7 Dph3-202ENSMUST00000067955 2953 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Retrieved 100 of 76,532 protein–RNA pairs in 30.5 ms