Protein–RNA interactions for Protein: Q80YV2

Zc3hc1, Nuclear-interacting partner of ALK, mousemouse

Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Zc3hc1Q80YV2 Tmem217-201ENSMUST00000114683 904 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Zc3hc1Q80YV2 Gm6222-201ENSMUST00000120787 396 ntBASIC12.57□□□□□ -0.4
Zc3hc1Q80YV2 Dph3-205ENSMUST00000124303 809 ntTSL 2 BASIC12.57□□□□□ -0.4
Zc3hc1Q80YV2 Fam241b-208ENSMUST00000142796 1135 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Zc3hc1Q80YV2 Tmem217-202ENSMUST00000168339 812 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Zc3hc1Q80YV2 Gm18027-201ENSMUST00000218947 619 ntBASIC12.57□□□□□ -0.4
Zc3hc1Q80YV2 AC164441.1-201ENSMUST00000221369 1004 ntTSL 5 BASIC12.57□□□□□ -0.4
Zc3hc1Q80YV2 AC149294.4-201ENSMUST00000227870 882 ntBASIC12.57□□□□□ -0.4
Zc3hc1Q80YV2 Ephb3-201ENSMUST00000006112 4185 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Zc3hc1Q80YV2 Nfe2-205ENSMUST00000133600 1605 ntTSL 5 BASIC12.57□□□□□ -0.4
Zc3hc1Q80YV2 Ces2e-202ENSMUST00000109410 1999 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Zc3hc1Q80YV2 I730028E13Rik-201ENSMUST00000216012 1959 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Zc3hc1Q80YV2 Gm853-201ENSMUST00000023884 2314 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Zc3hc1Q80YV2 Taf6-201ENSMUST00000048698 2304 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Zc3hc1Q80YV2 Itgb4-203ENSMUST00000106458 5779 ntAPPRIS ALT2 TSL 5 BASIC12.57□□□□□ -0.4
Zc3hc1Q80YV2 Lmbr1l-202ENSMUST00000109127 2548 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Zc3hc1Q80YV2 Scara5-201ENSMUST00000022610 3794 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Zc3hc1Q80YV2 Fam126b-201ENSMUST00000038372 2385 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Zc3hc1Q80YV2 Arhgef2-208ENSMUST00000175911 2030 ntAPPRIS ALT2 TSL 5 BASIC12.57□□□□□ -0.4
Zc3hc1Q80YV2 Slc9a3r2-202ENSMUST00000019684 1688 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Zc3hc1Q80YV2 Nynrin-202ENSMUST00000168479 7511 ntAPPRIS P1 TSL 5 BASIC12.57□□□□□ -0.4
Zc3hc1Q80YV2 Kdm2b-204ENSMUST00000118027 5062 ntAPPRIS ALT2 TSL 5 BASIC12.57□□□□□ -0.4
Zc3hc1Q80YV2 Rgs12-202ENSMUST00000087684 4713 ntAPPRIS ALT2 TSL 5 BASIC12.57□□□□□ -0.4
Zc3hc1Q80YV2 H2-Q6-202ENSMUST00000174699 2085 ntAPPRIS P1 TSL 5 BASIC12.57□□□□□ -0.4
Zc3hc1Q80YV2 Rp2-201ENSMUST00000033372 4417 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Zc3hc1Q80YV2 Ccdc116-203ENSMUST00000115711 1915 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Zc3hc1Q80YV2 Acsl6-210ENSMUST00000108905 5807 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Zc3hc1Q80YV2 Gm45751-201ENSMUST00000210185 1573 ntBASIC12.56□□□□□ -0.4
Zc3hc1Q80YV2 Rtraf-201ENSMUST00000022341 1562 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Zc3hc1Q80YV2 Pdxk-ps-201ENSMUST00000159650 2342 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Zc3hc1Q80YV2 Bicd1-202ENSMUST00000086829 9667 ntAPPRIS P2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Zc3hc1Q80YV2 Zfyve28-201ENSMUST00000094868 3983 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Zc3hc1Q80YV2 Abat-203ENSMUST00000115839 2414 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Zc3hc1Q80YV2 Adcyap1r1-202ENSMUST00000070756 6107 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Zc3hc1Q80YV2 Strip1-201ENSMUST00000064759 3215 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Zc3hc1Q80YV2 Casc4-202ENSMUST00000089912 3602 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Zc3hc1Q80YV2 Nwd2-201ENSMUST00000159584 8534 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Zc3hc1Q80YV2 Crybb3-202ENSMUST00000117143 749 ntAPPRIS P1 TSL 3 BASIC12.56□□□□□ -0.4
Zc3hc1Q80YV2 Pcp2-204ENSMUST00000136105 504 ntAPPRIS P4 TSL 1 (best) BASIC12.56□□□□□ -0.4
Zc3hc1Q80YV2 Timm23-201ENSMUST00000013845 1173 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Zc3hc1Q80YV2 Gm11025-201ENSMUST00000140773 466 ntBASIC12.56□□□□□ -0.4
Zc3hc1Q80YV2 Mkln1os-202ENSMUST00000144232 964 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Zc3hc1Q80YV2 4930570G19Rik-204ENSMUST00000149387 986 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Zc3hc1Q80YV2 Gm9727-201ENSMUST00000161387 555 ntBASIC12.56□□□□□ -0.4
Zc3hc1Q80YV2 Naxd-205ENSMUST00000178721 1108 ntTSL 5 BASIC12.56□□□□□ -0.4
Zc3hc1Q80YV2 Gm26661-201ENSMUST00000181025 471 ntAPPRIS P1 BASIC12.56□□□□□ -0.4
Zc3hc1Q80YV2 2900092O11Rik-201ENSMUST00000191770 755 ntBASIC12.56□□□□□ -0.4
Zc3hc1Q80YV2 Trip6-203ENSMUST00000199121 366 ntTSL 3 BASIC12.56□□□□□ -0.4
Zc3hc1Q80YV2 Vsig2-206ENSMUST00000215957 851 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Zc3hc1Q80YV2 AC090659.1-201ENSMUST00000224334 768 ntBASIC12.56□□□□□ -0.4
Zc3hc1Q80YV2 Tspo-201ENSMUST00000047419 837 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Zc3hc1Q80YV2 Olfr541-201ENSMUST00000080681 1103 ntAPPRIS P1 BASIC12.56□□□□□ -0.4
Zc3hc1Q80YV2 Ifnl2-201ENSMUST00000081684 702 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Zc3hc1Q80YV2 Myog-201ENSMUST00000027730 1495 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Zc3hc1Q80YV2 Gm7899-201ENSMUST00000192935 1897 ntBASIC12.56□□□□□ -0.4
Zc3hc1Q80YV2 5031415H12Rik-201ENSMUST00000181546 2481 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Zc3hc1Q80YV2 Mks1-201ENSMUST00000038196 2499 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Zc3hc1Q80YV2 Zfp444-204ENSMUST00000108567 5104 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Zc3hc1Q80YV2 Ctsa-203ENSMUST00000103093 2534 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Zc3hc1Q80YV2 Fbxo8-202ENSMUST00000110322 1709 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Zc3hc1Q80YV2 Sbds-201ENSMUST00000026387 1548 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Zc3hc1Q80YV2 Mnt-201ENSMUST00000000291 4590 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Zc3hc1Q80YV2 Gm11611-201ENSMUST00000134289 1326 ntTSL 3 BASIC12.56□□□□□ -0.4
Zc3hc1Q80YV2 Phf21b-201ENSMUST00000016768 3377 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Zc3hc1Q80YV2 Tjap1-203ENSMUST00000180283 2368 ntAPPRIS P2 TSL 5 BASIC12.56□□□□□ -0.4
Zc3hc1Q80YV2 Txn2-203ENSMUST00000109747 1778 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Zc3hc1Q80YV2 Ulk3-201ENSMUST00000053230 2826 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Zc3hc1Q80YV2 Nkain3-201ENSMUST00000102998 3098 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Zc3hc1Q80YV2 Zfp853-202ENSMUST00000212355 2871 ntAPPRIS P5 TSL 5 BASIC12.55□□□□□ -0.4
Zc3hc1Q80YV2 Tnk1-203ENSMUST00000108628 2450 ntAPPRIS ALT2 TSL 5 BASIC12.55□□□□□ -0.4
Zc3hc1Q80YV2 Ccdc185-201ENSMUST00000060041 2055 ntAPPRIS P1 BASIC12.55□□□□□ -0.4
Zc3hc1Q80YV2 Nfic-202ENSMUST00000078185 3163 ntTSL 5 BASIC12.55□□□□□ -0.4
Zc3hc1Q80YV2 4930425O10Rik-201ENSMUST00000197761 1418 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Zc3hc1Q80YV2 Rtp3-201ENSMUST00000084922 1425 ntAPPRIS P1 TSL 5 BASIC12.55□□□□□ -0.4
Zc3hc1Q80YV2 Ap2a1-201ENSMUST00000085399 3442 ntAPPRIS P1 TSL 5 BASIC12.55□□□□□ -0.4
Zc3hc1Q80YV2 Sema3d-201ENSMUST00000030868 6307 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Zc3hc1Q80YV2 Gm8337-201ENSMUST00000187358 1938 ntBASIC12.55□□□□□ -0.4
Zc3hc1Q80YV2 Atat1-201ENSMUST00000056034 1930 ntAPPRIS P3 TSL 1 (best) BASIC12.55□□□□□ -0.4
Zc3hc1Q80YV2 Gm13730-201ENSMUST00000121036 1462 ntBASIC12.55□□□□□ -0.4
Zc3hc1Q80YV2 Pdlim3-203ENSMUST00000210422 1479 ntAPPRIS ALT1 TSL 5 BASIC12.55□□□□□ -0.4
Zc3hc1Q80YV2 Sergef-201ENSMUST00000033127 1465 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Zc3hc1Q80YV2 Sfxn5-203ENSMUST00000113787 638 ntTSL 2 BASIC12.55□□□□□ -0.4
Zc3hc1Q80YV2 2410006H16Rik-201ENSMUST00000131787 462 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Zc3hc1Q80YV2 A530058N18Rik-205ENSMUST00000143993 550 ntTSL 3 BASIC12.55□□□□□ -0.4
Zc3hc1Q80YV2 Gm15677-201ENSMUST00000152302 766 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Zc3hc1Q80YV2 2210408F21Rik-214ENSMUST00000155345 1022 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Zc3hc1Q80YV2 Wfdc2-201ENSMUST00000017867 849 ntAPPRIS P2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Zc3hc1Q80YV2 Mir8117-201ENSMUST00000184773 107 ntBASIC12.55□□□□□ -0.4
Zc3hc1Q80YV2 Gm38225-201ENSMUST00000194001 393 ntBASIC12.55□□□□□ -0.4
Zc3hc1Q80YV2 Sox2ot-202ENSMUST00000196058 753 ntTSL 3 BASIC12.55□□□□□ -0.4
Zc3hc1Q80YV2 Abhd18-207ENSMUST00000203892 1021 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Zc3hc1Q80YV2 Mrpl34-201ENSMUST00000048914 607 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Zc3hc1Q80YV2 H2bfm-201ENSMUST00000059808 1052 ntAPPRIS P1 BASIC12.55□□□□□ -0.4
Zc3hc1Q80YV2 Lce3e-201ENSMUST00000098886 607 ntAPPRIS P1 TSL 3 BASIC12.55□□□□□ -0.4
Zc3hc1Q80YV2 Phactr3-202ENSMUST00000103066 2680 ntAPPRIS P4 TSL 1 (best) BASIC12.55□□□□□ -0.4
Zc3hc1Q80YV2 Engase-202ENSMUST00000135383 4064 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Zc3hc1Q80YV2 Gm10305-201ENSMUST00000195331 2475 ntBASIC12.55□□□□□ -0.4
Zc3hc1Q80YV2 Arl4a-205ENSMUST00000146905 3710 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Zc3hc1Q80YV2 1700029J07Rik-202ENSMUST00000098786 1340 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Zc3hc1Q80YV2 Alg2-201ENSMUST00000044148 3021 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Retrieved 100 of 76,532 protein–RNA pairs in 36.4 ms