Protein–RNA interactions for Protein: Q80SX8

Pif1, ATP-dependent DNA helicase PIF1, mousemouse

Predictions only

Length 650 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pif1Q80SX8 Map7d1-203ENSMUST00000122129 3249 ntAPPRIS ALT2 TSL 5 BASIC12.7□□□□□ -0.38
Pif1Q80SX8 Rrp1b-201ENSMUST00000081339 4874 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Pif1Q80SX8 Zfp574-201ENSMUST00000053410 3145 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Pif1Q80SX8 B4galnt1-201ENSMUST00000006914 2395 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Pif1Q80SX8 Gatd1-201ENSMUST00000106008 1898 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Pif1Q80SX8 Tepsin-203ENSMUST00000106225 2566 ntAPPRIS ALT2 TSL 5 BASIC12.7□□□□□ -0.38
Pif1Q80SX8 Olfr1156-203ENSMUST00000216726 3271 ntAPPRIS P1 TSL 5 BASIC12.7□□□□□ -0.38
Pif1Q80SX8 Ccdc27-201ENSMUST00000047207 2089 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Pif1Q80SX8 4933417O13Rik-202ENSMUST00000208893 1571 ntTSL 5 BASIC12.69□□□□□ -0.38
Pif1Q80SX8 Glyr1-202ENSMUST00000115844 3348 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Pif1Q80SX8 Glyr1-201ENSMUST00000023189 3330 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Pif1Q80SX8 Gm8775-201ENSMUST00000170943 1327 ntBASIC12.69□□□□□ -0.38
Pif1Q80SX8 Tial1-203ENSMUST00000106228 2835 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Pif1Q80SX8 Taok2-201ENSMUST00000071268 4720 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Pif1Q80SX8 Tmem53-202ENSMUST00000106433 913 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Pif1Q80SX8 Camp-201ENSMUST00000112022 758 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Pif1Q80SX8 Gm11814-201ENSMUST00000119515 929 ntBASIC12.69□□□□□ -0.38
Pif1Q80SX8 Rsf1os2-203ENSMUST00000155074 998 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Pif1Q80SX8 Gm6460-202ENSMUST00000163787 821 ntAPPRIS P2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Pif1Q80SX8 Gm8879-201ENSMUST00000170260 1125 ntAPPRIS P1 TSL 5 BASIC12.69□□□□□ -0.38
Pif1Q80SX8 4933402N22Rik-202ENSMUST00000170301 1092 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Pif1Q80SX8 Neat1-203ENSMUST00000174829 1030 ntTSL 5 BASIC12.69□□□□□ -0.38
Pif1Q80SX8 Smco4-202ENSMUST00000178999 820 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Pif1Q80SX8 Gm38319-201ENSMUST00000194537 1266 ntBASIC12.69□□□□□ -0.38
Pif1Q80SX8 Gm42902-201ENSMUST00000199508 662 ntTSL 5 BASIC12.69□□□□□ -0.38
Pif1Q80SX8 Gnpat-201ENSMUST00000034466 2984 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Pif1Q80SX8 Smco4-201ENSMUST00000045620 954 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Pif1Q80SX8 Vps26b-201ENSMUST00000034470 3575 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Pif1Q80SX8 4732463B04Rik-201ENSMUST00000180751 2932 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Pif1Q80SX8 Klhl9-201ENSMUST00000094993 4174 ntAPPRIS P1 BASIC12.69□□□□□ -0.38
Pif1Q80SX8 Fam76b-201ENSMUST00000059579 3702 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Pif1Q80SX8 Sh3bp5-201ENSMUST00000091903 2684 ntAPPRIS P3 TSL 1 (best) BASIC12.69□□□□□ -0.38
Pif1Q80SX8 Myocd-202ENSMUST00000102635 4935 ntAPPRIS P3 TSL 1 (best) BASIC12.69□□□□□ -0.38
Pif1Q80SX8 Retsat-205ENSMUST00000176364 1647 ntTSL 5 BASIC12.69□□□□□ -0.38
Pif1Q80SX8 Fn3k-202ENSMUST00000092302 1803 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Pif1Q80SX8 Prkcz-201ENSMUST00000030922 2641 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Pif1Q80SX8 Rnf4-207ENSMUST00000182709 3046 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Pif1Q80SX8 Rbm34-201ENSMUST00000045994 3424 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Pif1Q80SX8 Pcsk6-202ENSMUST00000098391 4207 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Pif1Q80SX8 Gm45003-201ENSMUST00000205875 2158 ntBASIC12.69□□□□□ -0.38
Pif1Q80SX8 Ntrk2-208ENSMUST00000225583 2719 ntBASIC12.68□□□□□ -0.38
Pif1Q80SX8 Kcnc4-201ENSMUST00000009617 3667 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Pif1Q80SX8 Hist1h1e-201ENSMUST00000062045 1930 ntAPPRIS P1 BASIC12.68□□□□□ -0.38
Pif1Q80SX8 Brpf1-210ENSMUST00000204626 4381 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Pif1Q80SX8 Gm11978-202ENSMUST00000127510 1303 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Pif1Q80SX8 Dhrs3-207ENSMUST00000171001 1349 ntTSL 5 BASIC12.68□□□□□ -0.38
Pif1Q80SX8 Sh3bp5-202ENSMUST00000100730 2633 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Pif1Q80SX8 Aqp8-201ENSMUST00000033023 1487 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Pif1Q80SX8 Amdhd2-201ENSMUST00000040735 1496 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Pif1Q80SX8 Hjurp-206ENSMUST00000147393 2030 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Pif1Q80SX8 Fer-202ENSMUST00000038080 2365 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Pif1Q80SX8 Car4-201ENSMUST00000103194 1256 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Pif1Q80SX8 Dhrs3-202ENSMUST00000105744 1226 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Pif1Q80SX8 Lsm2-202ENSMUST00000114011 840 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Pif1Q80SX8 Gm13226-201ENSMUST00000117838 404 ntBASIC12.68□□□□□ -0.38
Pif1Q80SX8 Car15-201ENSMUST00000118960 1283 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Pif1Q80SX8 Gm15376-201ENSMUST00000122258 783 ntBASIC12.68□□□□□ -0.38
Pif1Q80SX8 4933427I22Rik-201ENSMUST00000138672 393 ntTSL 3 BASIC12.68□□□□□ -0.38
Pif1Q80SX8 Gm8652-201ENSMUST00000181363 964 ntBASIC12.68□□□□□ -0.38
Pif1Q80SX8 Gm27847-201ENSMUST00000183711 107 ntBASIC12.68□□□□□ -0.38
Pif1Q80SX8 Gm27375-201ENSMUST00000183799 107 ntBASIC12.68□□□□□ -0.38
Pif1Q80SX8 Rnf2-203ENSMUST00000186415 1106 ntTSL 5 BASIC12.68□□□□□ -0.38
Pif1Q80SX8 Gm5069-202ENSMUST00000192714 1011 ntBASIC12.68□□□□□ -0.38
Pif1Q80SX8 AC131690.1-201ENSMUST00000218406 374 ntBASIC12.68□□□□□ -0.38
Pif1Q80SX8 Tmem54-202ENSMUST00000030577 988 ntAPPRIS ALT2 TSL 3 BASIC12.68□□□□□ -0.38
Pif1Q80SX8 Epha1-201ENSMUST00000073387 3273 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Pif1Q80SX8 Stag1-206ENSMUST00000129269 6186 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Pif1Q80SX8 Eif4g1-204ENSMUST00000115460 5638 ntAPPRIS P3 TSL 5 BASIC12.68□□□□□ -0.38
Pif1Q80SX8 Cry2-202ENSMUST00000111278 2160 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Pif1Q80SX8 Lrp8os2-204ENSMUST00000188737 3078 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Pif1Q80SX8 Cdx4-201ENSMUST00000033689 1963 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Pif1Q80SX8 Ppt2-210ENSMUST00000171376 1750 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Pif1Q80SX8 Tbc1d10c-201ENSMUST00000045864 1758 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Pif1Q80SX8 Zkscan17-201ENSMUST00000013262 4064 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Pif1Q80SX8 Cfap99-201ENSMUST00000207754 2123 ntAPPRIS P1 TSL 5 BASIC12.68□□□□□ -0.38
Pif1Q80SX8 Myo1c-204ENSMUST00000108431 4718 ntAPPRIS P2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Pif1Q80SX8 Pglyrp2-201ENSMUST00000114455 1915 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Pif1Q80SX8 Tsc2-221ENSMUST00000228412 5432 ntAPPRIS ALT2 BASIC12.68□□□□□ -0.38
Pif1Q80SX8 Spock1-205ENSMUST00000187852 3113 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Pif1Q80SX8 Rasal3-207ENSMUST00000137458 3272 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Pif1Q80SX8 Spidr-201ENSMUST00000040248 3279 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Pif1Q80SX8 Myef2-206ENSMUST00000142718 2942 ntAPPRIS ALT2 TSL 5 BASIC12.68□□□□□ -0.38
Pif1Q80SX8 Hmbs-202ENSMUST00000097558 1534 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Pif1Q80SX8 Zfp740-201ENSMUST00000118729 4241 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Pif1Q80SX8 Lrch4-202ENSMUST00000175968 2036 ntAPPRIS ALT2 TSL 5 BASIC12.67□□□□□ -0.38
Pif1Q80SX8 Gckr-201ENSMUST00000072228 2014 ntAPPRIS P2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Pif1Q80SX8 Tmem55a-201ENSMUST00000029875 2339 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Pif1Q80SX8 Capn7-201ENSMUST00000022451 3648 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Pif1Q80SX8 Dolpp1-202ENSMUST00000113612 1958 ntTSL 3 BASIC12.67□□□□□ -0.38
Pif1Q80SX8 Zscan30-202ENSMUST00000224144 1458 ntBASIC12.67□□□□□ -0.38
Pif1Q80SX8 Dixdc1-202ENSMUST00000117093 1613 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Pif1Q80SX8 Doc2b-201ENSMUST00000021209 4361 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Pif1Q80SX8 Gm45630-201ENSMUST00000210243 1911 ntBASIC12.67□□□□□ -0.38
Pif1Q80SX8 Dlk1-202ENSMUST00000109841 879 ntTSL 5 BASIC12.67□□□□□ -0.38
Pif1Q80SX8 Mrpl40-202ENSMUST00000119273 778 ntTSL 3 BASIC12.67□□□□□ -0.38
Pif1Q80SX8 Gm15420-201ENSMUST00000133274 382 ntTSL 3 BASIC12.67□□□□□ -0.38
Pif1Q80SX8 Gm13112-201ENSMUST00000138795 1258 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Pif1Q80SX8 Gm833-201ENSMUST00000143133 884 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Pif1Q80SX8 Gm11684-201ENSMUST00000144975 757 ntTSL 5 BASIC12.67□□□□□ -0.38
Pif1Q80SX8 Gm11723-201ENSMUST00000155505 466 ntTSL 3 BASIC12.67□□□□□ -0.38
Retrieved 100 of 76,532 protein–RNA pairs in 67.3 ms