Protein–RNA interactions for Protein: Q78JW9

Ubfd1, Ubiquitin domain-containing protein UBFD1, mousemouse

Predictions only

Length 368 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ubfd1Q78JW9 Gm5276-201ENSMUST00000196683 1047 ntBASIC13.36□□□□□ -0.27
Ubfd1Q78JW9 Sox2ot-216ENSMUST00000200092 767 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Ubfd1Q78JW9 Sh3bgrl3-201ENSMUST00000030651 743 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Ubfd1Q78JW9 Tmem242-201ENSMUST00000005053 948 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Ubfd1Q78JW9 Plpp4-201ENSMUST00000094018 1256 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Ubfd1Q78JW9 Ylpm1-207ENSMUST00000168977 4893 ntAPPRIS ALT2 TSL 5 BASIC13.36□□□□□ -0.27
Ubfd1Q78JW9 Il15-201ENSMUST00000034148 1908 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Ubfd1Q78JW9 Smim1-201ENSMUST00000125533 2568 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Ubfd1Q78JW9 Irx3os-201ENSMUST00000062522 2988 ntTSL 5 BASIC13.36□□□□□ -0.27
Ubfd1Q78JW9 Canx-205ENSMUST00000179865 4281 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Ubfd1Q78JW9 Apbb1-213ENSMUST00000189265 1429 ntTSL 5 BASIC13.36□□□□□ -0.27
Ubfd1Q78JW9 Ttll5-203ENSMUST00000095536 4150 ntAPPRIS ALT2 TSL 2 BASIC13.36□□□□□ -0.27
Ubfd1Q78JW9 Slc25a21-201ENSMUST00000044634 2609 ntAPPRIS P3 TSL 1 (best) BASIC13.36□□□□□ -0.27
Ubfd1Q78JW9 Gm8775-201ENSMUST00000170943 1327 ntBASIC13.36□□□□□ -0.27
Ubfd1Q78JW9 Gm15222-202ENSMUST00000228667 1726 ntBASIC13.36□□□□□ -0.27
Ubfd1Q78JW9 Lpcat1-208ENSMUST00000223060 2141 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Ubfd1Q78JW9 Pxdn-201ENSMUST00000118321 2698 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Ubfd1Q78JW9 Anks1b-204ENSMUST00000179337 2692 ntTSL 5 BASIC13.36□□□□□ -0.27
Ubfd1Q78JW9 Marveld2-203ENSMUST00000168772 1888 ntAPPRIS P1 TSL 5 BASIC13.36□□□□□ -0.27
Ubfd1Q78JW9 Acox3-204ENSMUST00000114238 2825 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Ubfd1Q78JW9 Vps53-201ENSMUST00000056601 2833 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Ubfd1Q78JW9 Slc35c2-204ENSMUST00000109300 2008 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Ubfd1Q78JW9 Fbxo34-203ENSMUST00000163324 3132 ntAPPRIS ALT2 TSL 2 BASIC13.35□□□□□ -0.27
Ubfd1Q78JW9 Bid-201ENSMUST00000004560 2189 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Ubfd1Q78JW9 Vwa3b-202ENSMUST00000067178 1769 ntAPPRIS P5 TSL 2 BASIC13.35□□□□□ -0.27
Ubfd1Q78JW9 Gm15816-201ENSMUST00000141930 1688 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Ubfd1Q78JW9 Pid1-207ENSMUST00000177458 2521 ntTSL 2 BASIC13.35□□□□□ -0.27
Ubfd1Q78JW9 Nfatc4-204ENSMUST00000226357 2680 ntAPPRIS ALT2 BASIC13.35□□□□□ -0.27
Ubfd1Q78JW9 Grb10-201ENSMUST00000093321 5061 ntAPPRIS P3 TSL 1 (best) BASIC13.35□□□□□ -0.27
Ubfd1Q78JW9 Zfp853-201ENSMUST00000180336 1956 ntAPPRIS ALT2 TSL 5 BASIC13.35□□□□□ -0.27
Ubfd1Q78JW9 Pax5-206ENSMUST00000134968 969 ntTSL 5 BASIC13.35□□□□□ -0.27
Ubfd1Q78JW9 Nat8f4-202ENSMUST00000159755 1129 ntTSL 2 BASIC13.35□□□□□ -0.27
Ubfd1Q78JW9 Pfdn6-205ENSMUST00000174426 396 ntTSL 2 BASIC13.35□□□□□ -0.27
Ubfd1Q78JW9 Gm6266-201ENSMUST00000203844 806 ntBASIC13.35□□□□□ -0.27
Ubfd1Q78JW9 Rhox2e-201ENSMUST00000072167 799 ntAPPRIS P1 TSL 5 BASIC13.35□□□□□ -0.27
Ubfd1Q78JW9 Akr1b7-201ENSMUST00000007449 1281 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Ubfd1Q78JW9 Gm25857-201ENSMUST00000082788 129 ntBASIC13.35□□□□□ -0.27
Ubfd1Q78JW9 Efnb1-201ENSMUST00000052839 3258 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Ubfd1Q78JW9 Phyh-201ENSMUST00000027975 1438 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Ubfd1Q78JW9 Ypel3-203ENSMUST00000106357 1594 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Ubfd1Q78JW9 Hlcs-205ENSMUST00000227141 4021 ntAPPRIS ALT2 BASIC13.35□□□□□ -0.27
Ubfd1Q78JW9 Ociad1-202ENSMUST00000071081 1311 ntTSL 3 BASIC13.35□□□□□ -0.27
Ubfd1Q78JW9 Phka1-201ENSMUST00000043596 5938 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Ubfd1Q78JW9 Thnsl2-202ENSMUST00000160918 2077 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Ubfd1Q78JW9 Mon1a-202ENSMUST00000191906 2821 ntTSL 2 BASIC13.35□□□□□ -0.27
Ubfd1Q78JW9 Ptdss1-201ENSMUST00000021990 3424 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Ubfd1Q78JW9 Mtif2-202ENSMUST00000093239 2741 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Ubfd1Q78JW9 Tmed8-201ENSMUST00000037418 7409 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Ubfd1Q78JW9 Stk33-202ENSMUST00000106745 2410 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Ubfd1Q78JW9 Dkk1-201ENSMUST00000025803 2427 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Ubfd1Q78JW9 Rims1-201ENSMUST00000081544 5954 ntAPPRIS ALT2 TSL 5 BASIC13.34□□□□□ -0.27
Ubfd1Q78JW9 Camk2b-209ENSMUST00000109813 4023 ntAPPRIS P2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Ubfd1Q78JW9 Camk2b-204ENSMUST00000090443 4004 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Ubfd1Q78JW9 Kctd3-201ENSMUST00000085678 3706 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Ubfd1Q78JW9 Decr2-201ENSMUST00000040907 2187 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Ubfd1Q78JW9 Sipa1-204ENSMUST00000169854 3583 ntAPPRIS P1 TSL 5 BASIC13.34□□□□□ -0.27
Ubfd1Q78JW9 Abi2-201ENSMUST00000052332 5768 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Ubfd1Q78JW9 Nt5c2-203ENSMUST00000172239 3148 ntTSL 5 BASIC13.34□□□□□ -0.27
Ubfd1Q78JW9 Psma3-202ENSMUST00000160027 2846 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Ubfd1Q78JW9 Spg20-201ENSMUST00000044116 3770 ntAPPRIS P3 TSL 1 (best) BASIC13.34□□□□□ -0.27
Ubfd1Q78JW9 Igsf5-202ENSMUST00000081093 1554 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Ubfd1Q78JW9 Eif3f-201ENSMUST00000033342 2514 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Ubfd1Q78JW9 Glyr1-202ENSMUST00000115844 3348 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Ubfd1Q78JW9 Gm10371-201ENSMUST00000127429 1411 ntTSL 2 BASIC13.34□□□□□ -0.27
Ubfd1Q78JW9 Glyr1-201ENSMUST00000023189 3330 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Ubfd1Q78JW9 Lcn5-203ENSMUST00000100313 660 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Ubfd1Q78JW9 Gm11814-201ENSMUST00000119515 929 ntBASIC13.34□□□□□ -0.27
Ubfd1Q78JW9 Rpl9-203ENSMUST00000120094 680 ntAPPRIS P1 TSL 2 BASIC13.34□□□□□ -0.27
Ubfd1Q78JW9 Gm38144-201ENSMUST00000192790 465 ntBASIC13.34□□□□□ -0.27
Ubfd1Q78JW9 Gm20219-201ENSMUST00000209718 1269 ntAPPRIS P1 TSL 5 BASIC13.34□□□□□ -0.27
Ubfd1Q78JW9 Fuom-201ENSMUST00000026539 685 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Ubfd1Q78JW9 Csrp3-201ENSMUST00000032658 877 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Ubfd1Q78JW9 Mrps17-201ENSMUST00000042191 832 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Ubfd1Q78JW9 Fstl5-201ENSMUST00000038364 5107 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Ubfd1Q78JW9 Tnfaip8-207ENSMUST00000148159 1921 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Ubfd1Q78JW9 Nfe2-207ENSMUST00000134554 1761 ntAPPRIS P1 TSL 2 BASIC13.34□□□□□ -0.27
Ubfd1Q78JW9 Dr1-201ENSMUST00000031190 3085 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Ubfd1Q78JW9 Slc35g3-201ENSMUST00000102586 1618 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Ubfd1Q78JW9 Gm13730-201ENSMUST00000121036 1462 ntBASIC13.34□□□□□ -0.27
Ubfd1Q78JW9 Chtop-205ENSMUST00000107343 3118 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Ubfd1Q78JW9 Ror2-201ENSMUST00000021918 3985 ntAPPRIS P2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Ubfd1Q78JW9 Gm4756-202ENSMUST00000208039 2344 ntAPPRIS P1 TSL 5 BASIC13.34□□□□□ -0.27
Ubfd1Q78JW9 Phka1-204ENSMUST00000119229 6025 ntAPPRIS ALT2 TSL 5 BASIC13.34□□□□□ -0.27
Ubfd1Q78JW9 Car3-201ENSMUST00000029076 1679 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Ubfd1Q78JW9 Mfrp-205ENSMUST00000206308 4037 ntAPPRIS ALT2 TSL 5 BASIC13.34□□□□□ -0.27
Ubfd1Q78JW9 Col3a1-201ENSMUST00000087883 5564 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Ubfd1Q78JW9 Klf15-202ENSMUST00000113530 2374 ntAPPRIS P1 TSL 5 BASIC13.34□□□□□ -0.27
Ubfd1Q78JW9 Aurka-203ENSMUST00000109140 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.27
Ubfd1Q78JW9 Srsf10-204ENSMUST00000105853 3058 ntAPPRIS P3 TSL 1 (best) BASIC13.33□□□□□ -0.27
Ubfd1Q78JW9 Repin1-204ENSMUST00000135151 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.27
Ubfd1Q78JW9 Creld2-201ENSMUST00000024042 1364 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
Ubfd1Q78JW9 Cc2d1b-201ENSMUST00000030320 3303 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Ubfd1Q78JW9 R3hdm2-212ENSMUST00000166820 4281 ntAPPRIS P2 TSL 5 BASIC13.33□□□□□ -0.28
Ubfd1Q78JW9 Tmem39a-214ENSMUST00000171687 2667 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Ubfd1Q78JW9 Mocos-201ENSMUST00000068006 2884 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Ubfd1Q78JW9 Ccnf-201ENSMUST00000115390 3099 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Ubfd1Q78JW9 Car10-203ENSMUST00000107858 2742 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Ubfd1Q78JW9 Prss45-201ENSMUST00000011391 1232 ntAPPRIS P2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Ubfd1Q78JW9 Ankzf1-201ENSMUST00000127625 1167 ntTSL 5 BASIC13.33□□□□□ -0.28
Ubfd1Q78JW9 Gm11592-201ENSMUST00000133160 637 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Retrieved 100 of 76,532 protein–RNA pairs in 39.6 ms