Protein–RNA interactions for Protein: Q71M36

Cspg5, Chondroitin sulfate proteoglycan 5, mousemouse

Predictions only

Length 566 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cspg5Q71M36 Gapdh-203ENSMUST00000118875 1420 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Cspg5Q71M36 Enpp6-202ENSMUST00000119686 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Cspg5Q71M36 Gm42690-201ENSMUST00000197921 1836 ntBASIC14.25□□□□□ -0.13
Cspg5Q71M36 D130052B06Rik-201ENSMUST00000101371 2295 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Cspg5Q71M36 Slc7a7-206ENSMUST00000197440 2278 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Cspg5Q71M36 Slco3a1-202ENSMUST00000098371 2709 ntAPPRIS ALT1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Cspg5Q71M36 Gtf2ird1-205ENSMUST00000100654 3156 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Cspg5Q71M36 Dpp3-201ENSMUST00000025851 2683 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Cspg5Q71M36 Slc39a4-201ENSMUST00000073428 2224 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Cspg5Q71M36 Urm1-201ENSMUST00000091142 2196 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Cspg5Q71M36 Eaf2-204ENSMUST00000114829 1030 ntAPPRIS P2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Cspg5Q71M36 Pdpn-202ENSMUST00000119654 762 ntAPPRIS ALT2 TSL 3 BASIC14.25□□□□□ -0.13
Cspg5Q71M36 1700001C02Rik-203ENSMUST00000127815 660 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Cspg5Q71M36 Ndufaf2-201ENSMUST00000163558 678 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Cspg5Q71M36 Tac2-202ENSMUST00000179960 852 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Cspg5Q71M36 Gm11214-201ENSMUST00000184252 552 ntAPPRIS P1 BASIC14.25□□□□□ -0.13
Cspg5Q71M36 Gm28942-201ENSMUST00000186334 365 ntTSL 3 BASIC14.25□□□□□ -0.13
Cspg5Q71M36 Gm9932-201ENSMUST00000194154 2116 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Cspg5Q71M36 Tac2-201ENSMUST00000026466 678 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Cspg5Q71M36 Hist1h3b-201ENSMUST00000091703 620 ntAPPRIS P1 BASIC14.25□□□□□ -0.13
Cspg5Q71M36 Clic6-201ENSMUST00000023670 3758 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Cspg5Q71M36 Shc4-203ENSMUST00000110480 3671 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Cspg5Q71M36 Ppp1r12b-209ENSMUST00000168381 3621 ntAPPRIS P2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Cspg5Q71M36 Dysf-214ENSMUST00000204354 6432 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
Cspg5Q71M36 Matn2-206ENSMUST00000228570 2798 ntBASIC14.25□□□□□ -0.13
Cspg5Q71M36 Ddb2-201ENSMUST00000028696 1557 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Cspg5Q71M36 Flt4-201ENSMUST00000020617 6255 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Cspg5Q71M36 Abr-205ENSMUST00000108408 3534 ntTSL 5 BASIC14.25□□□□□ -0.13
Cspg5Q71M36 Tnn-201ENSMUST00000039178 5817 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Cspg5Q71M36 Ffar2-202ENSMUST00000163504 1913 ntAPPRIS P1 TSL 2 BASIC14.25□□□□□ -0.13
Cspg5Q71M36 Tbrg4-201ENSMUST00000000394 2290 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Cspg5Q71M36 Gm20546-201ENSMUST00000173141 1889 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Cspg5Q71M36 Kdm5c-202ENSMUST00000112584 5900 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
Cspg5Q71M36 Tuft1-203ENSMUST00000196655 2156 ntTSL 5 BASIC14.24□□□□□ -0.13
Cspg5Q71M36 Hnrnpr-204ENSMUST00000131671 2543 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Cspg5Q71M36 Six3os1-211ENSMUST00000176958 2889 ntTSL 2 BASIC14.24□□□□□ -0.13
Cspg5Q71M36 Stk16-201ENSMUST00000027401 2876 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Cspg5Q71M36 Hadh-201ENSMUST00000029610 1789 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Cspg5Q71M36 Wdr73-201ENSMUST00000026816 2114 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Cspg5Q71M36 Gng4-201ENSMUST00000021734 3179 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Cspg5Q71M36 Zfp444-204ENSMUST00000108567 5104 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Cspg5Q71M36 Myh7-201ENSMUST00000102803 6135 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Cspg5Q71M36 Sema6c-202ENSMUST00000090823 4029 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Cspg5Q71M36 Sntb2-203ENSMUST00000212524 9945 ntAPPRIS P2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Cspg5Q71M36 Atp2a3-202ENSMUST00000108484 4467 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
Cspg5Q71M36 Wfdc3-201ENSMUST00000103096 911 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Cspg5Q71M36 Camp-201ENSMUST00000112022 758 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Cspg5Q71M36 Gm13112-201ENSMUST00000138795 1258 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Cspg5Q71M36 Cenpa-206ENSMUST00000149759 346 ntTSL 3 BASIC14.24□□□□□ -0.13
Cspg5Q71M36 Zfp414-204ENSMUST00000166627 1211 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Cspg5Q71M36 Gm20753-201ENSMUST00000190105 545 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Cspg5Q71M36 Gm28198-201ENSMUST00000190938 471 ntTSL 3 BASIC14.24□□□□□ -0.13
Cspg5Q71M36 Gm45331-201ENSMUST00000209868 554 ntBASIC14.24□□□□□ -0.13
Cspg5Q71M36 Slc35d2-202ENSMUST00000220792 917 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Cspg5Q71M36 Zfp414-201ENSMUST00000073570 1197 ntAPPRIS P2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Cspg5Q71M36 Pdk2-201ENSMUST00000038431 2246 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Cspg5Q71M36 Cdkn2aip-201ENSMUST00000038738 3464 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Cspg5Q71M36 Pcsk4-201ENSMUST00000020340 2539 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Cspg5Q71M36 Slc27a1-201ENSMUST00000034267 2795 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Cspg5Q71M36 4632404H12Rik-201ENSMUST00000038450 2791 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Cspg5Q71M36 Zbtb33-201ENSMUST00000049740 5122 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Cspg5Q71M36 P3h2-201ENSMUST00000039990 3283 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Cspg5Q71M36 Btbd10-201ENSMUST00000047091 2581 ntAPPRIS P2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Cspg5Q71M36 Zfp618-203ENSMUST00000107415 8826 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
Cspg5Q71M36 Col18a1-201ENSMUST00000072755 5595 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
Cspg5Q71M36 Wnt3a-201ENSMUST00000010044 2761 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Cspg5Q71M36 Myo19-202ENSMUST00000093969 4091 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
Cspg5Q71M36 Hnrnpa2b1-204ENSMUST00000203220 1638 ntAPPRIS P2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Cspg5Q71M36 CT030684.3-201ENSMUST00000227308 2445 ntBASIC14.23□□□□□ -0.13
Cspg5Q71M36 Zkscan7-202ENSMUST00000215872 4035 ntTSL 5 BASIC14.23□□□□□ -0.13
Cspg5Q71M36 Ccer1-201ENSMUST00000060703 1865 ntAPPRIS P1 BASIC14.23□□□□□ -0.13
Cspg5Q71M36 Nfatc4-204ENSMUST00000226357 2680 ntAPPRIS ALT2 BASIC14.23□□□□□ -0.13
Cspg5Q71M36 Dnaaf5-201ENSMUST00000026975 3450 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Cspg5Q71M36 Crem-201ENSMUST00000025069 2931 ntTSL 5 BASIC14.23□□□□□ -0.13
Cspg5Q71M36 Trmt1-205ENSMUST00000125370 2114 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
Cspg5Q71M36 4933415J04Rik-201ENSMUST00000195895 1301 ntBASIC14.23□□□□□ -0.13
Cspg5Q71M36 Gm36839-201ENSMUST00000222088 2093 ntTSL 5 BASIC14.23□□□□□ -0.13
Cspg5Q71M36 Gh-201ENSMUST00000103071 862 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Cspg5Q71M36 Oprl1-203ENSMUST00000108766 1241 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Cspg5Q71M36 Eogt-202ENSMUST00000113387 701 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
Cspg5Q71M36 H60b-202ENSMUST00000131558 1080 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
Cspg5Q71M36 Gm8062-201ENSMUST00000139696 444 ntBASIC14.23□□□□□ -0.13
Cspg5Q71M36 Rpl13a-201ENSMUST00000150350 1047 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Cspg5Q71M36 Ppm1h-208ENSMUST00000162969 811 ntTSL 3 BASIC14.23□□□□□ -0.13
Cspg5Q71M36 Arf5-202ENSMUST00000169841 768 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
Cspg5Q71M36 Prss55-203ENSMUST00000171503 1074 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Cspg5Q71M36 Gm6244-201ENSMUST00000178732 841 ntBASIC14.23□□□□□ -0.13
Cspg5Q71M36 Dap-204ENSMUST00000186425 597 ntTSL 3 BASIC14.23□□□□□ -0.13
Cspg5Q71M36 Efcab10-201ENSMUST00000020878 673 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Cspg5Q71M36 AC140451.2-201ENSMUST00000228030 664 ntBASIC14.23□□□□□ -0.13
Cspg5Q71M36 Lrp8os1-201ENSMUST00000030352 672 ntTSL 5 BASIC14.23□□□□□ -0.13
Cspg5Q71M36 Mrps17-201ENSMUST00000042191 832 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Cspg5Q71M36 Camkmt-201ENSMUST00000095188 972 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Cspg5Q71M36 Sgtb-201ENSMUST00000044385 3048 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Cspg5Q71M36 Vasp-201ENSMUST00000032561 2215 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Cspg5Q71M36 Prdm10-202ENSMUST00000117389 1952 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Cspg5Q71M36 Pdlim3-203ENSMUST00000210422 1479 ntAPPRIS ALT1 TSL 5 BASIC14.23□□□□□ -0.13
Cspg5Q71M36 Lrrc8d-201ENSMUST00000060531 3923 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Cspg5Q71M36 Prmt5-201ENSMUST00000023873 2691 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Cspg5Q71M36 Sh3bp5-201ENSMUST00000091903 2684 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 38.4 ms