Protein–RNA interactions for Protein: Q6P1D7

Slx4, Structure-specific endonuclease subunit SLX4, mousemouse

Predictions only

Length 1,565 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slx4Q6P1D7 Gstp-ps-201ENSMUST00000195526 631 ntBASIC20.75■□□□□ 0.91
Slx4Q6P1D7 Lypd2-201ENSMUST00000023260 513 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Slx4Q6P1D7 Lcn10-201ENSMUST00000058912 1106 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Slx4Q6P1D7 Usp20-201ENSMUST00000061544 1360 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
Slx4Q6P1D7 Gm10782-202ENSMUST00000223775 1480 ntBASIC20.75■□□□□ 0.91
Slx4Q6P1D7 Gm37736-201ENSMUST00000193564 2802 ntBASIC20.75■□□□□ 0.91
Slx4Q6P1D7 Rfx7-201ENSMUST00000093820 7988 ntAPPRIS P1 TSL 5 BASIC20.75■□□□□ 0.91
Slx4Q6P1D7 Caskin1-201ENSMUST00000024958 6172 ntAPPRIS P1 TSL 5 BASIC20.74■□□□□ 0.91
Slx4Q6P1D7 Mrgprh-201ENSMUST00000075296 1809 ntAPPRIS P1 BASIC20.74■□□□□ 0.91
Slx4Q6P1D7 6330537M06Rik-201ENSMUST00000212384 1642 ntBASIC20.74■□□□□ 0.91
Slx4Q6P1D7 Mettl17-201ENSMUST00000047899 1623 ntAPPRIS P2 TSL 1 (best) BASIC20.74■□□□□ 0.91
Slx4Q6P1D7 Gstcd-202ENSMUST00000080583 2394 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Slx4Q6P1D7 Vcan-205ENSMUST00000159337 2273 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
Slx4Q6P1D7 Nt5c2-203ENSMUST00000172239 3148 ntTSL 5 BASIC20.74■□□□□ 0.91
Slx4Q6P1D7 4732440D04Rik-203ENSMUST00000191825 5428 ntBASIC20.74■□□□□ 0.91
Slx4Q6P1D7 Dnm1l-203ENSMUST00000115749 4068 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
Slx4Q6P1D7 Dnm1l-202ENSMUST00000096229 4056 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
Slx4Q6P1D7 Syt7-203ENSMUST00000169121 6834 ntTSL 5 BASIC20.74■□□□□ 0.91
Slx4Q6P1D7 Elovl3-201ENSMUST00000043739 1494 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Slx4Q6P1D7 Gm12500-202ENSMUST00000186471 2428 ntBASIC20.74■□□□□ 0.91
Slx4Q6P1D7 Hsd17b6-201ENSMUST00000026462 1392 ntAPPRIS P1 TSL 5 BASIC20.74■□□□□ 0.91
Slx4Q6P1D7 Ggnbp1-202ENSMUST00000122106 1107 ntAPPRIS ALT2 TSL 5 BASIC20.74■□□□□ 0.91
Slx4Q6P1D7 Fhit-206ENSMUST00000162278 981 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Slx4Q6P1D7 Gm3625-201ENSMUST00000170816 102 ntAPPRIS P1 BASIC20.74■□□□□ 0.91
Slx4Q6P1D7 Ly6g6c-201ENSMUST00000173207 598 ntAPPRIS ALT2 TSL 3 BASIC20.74■□□□□ 0.91
Slx4Q6P1D7 Ly6g6c-202ENSMUST00000173478 962 ntAPPRIS P2 TSL 1 (best) BASIC20.74■□□□□ 0.91
Slx4Q6P1D7 1700020N18Rik-201ENSMUST00000188956 547 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
Slx4Q6P1D7 4930539M17Rik-201ENSMUST00000194792 846 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
Slx4Q6P1D7 Gm9004-201ENSMUST00000218739 1222 ntBASIC20.74■□□□□ 0.91
Slx4Q6P1D7 Ift43-205ENSMUST00000222821 783 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
Slx4Q6P1D7 Rpl10a-ps2-201ENSMUST00000071184 642 ntBASIC20.74■□□□□ 0.91
Slx4Q6P1D7 Lrp11-203ENSMUST00000130590 3220 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
Slx4Q6P1D7 Synpo-205ENSMUST00000130044 4970 ntAPPRIS P3 TSL 2 BASIC20.74■□□□□ 0.91
Slx4Q6P1D7 Pkp3-201ENSMUST00000066873 2848 ntAPPRIS P3 TSL 1 (best) BASIC20.74■□□□□ 0.91
Slx4Q6P1D7 Sema6d-203ENSMUST00000077847 6444 ntTSL 5 BASIC20.74■□□□□ 0.91
Slx4Q6P1D7 Smarcc1-207ENSMUST00000199896 5773 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
Slx4Q6P1D7 Ulk2-201ENSMUST00000004920 5743 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Slx4Q6P1D7 Dcp1b-202ENSMUST00000112777 3313 ntAPPRIS P2 TSL 1 (best) BASIC20.74■□□□□ 0.91
Slx4Q6P1D7 H2-Q1-201ENSMUST00000073208 2024 ntAPPRIS P2 TSL 1 (best) BASIC20.73■□□□□ 0.91
Slx4Q6P1D7 Rtn3-203ENSMUST00000088169 1709 ntTSL 5 BASIC20.73■□□□□ 0.91
Slx4Q6P1D7 Stk35-202ENSMUST00000166282 5445 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
Slx4Q6P1D7 Marveld3-202ENSMUST00000051430 2447 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Slx4Q6P1D7 E130114P18Rik-202ENSMUST00000107068 1132 ntAPPRIS P5 TSL 3 BASIC20.73■□□□□ 0.91
Slx4Q6P1D7 Gm11531-201ENSMUST00000117614 555 ntBASIC20.73■□□□□ 0.91
Slx4Q6P1D7 Nbdy-201ENSMUST00000140575 788 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
Slx4Q6P1D7 Nbdy-202ENSMUST00000149514 775 ntAPPRIS ALT2 TSL 2 BASIC20.73■□□□□ 0.91
Slx4Q6P1D7 Gm28287-201ENSMUST00000186612 546 ntTSL 5 BASIC20.73■□□□□ 0.91
Slx4Q6P1D7 Eloc-207ENSMUST00000187910 620 ntTSL 2 BASIC20.73■□□□□ 0.91
Slx4Q6P1D7 Ube2a-202ENSMUST00000200835 911 ntTSL 5 BASIC20.73■□□□□ 0.91
Slx4Q6P1D7 Ube2a-209ENSMUST00000202991 715 ntAPPRIS ALT1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Slx4Q6P1D7 CT009718.3-201ENSMUST00000221116 367 ntBASIC20.73■□□□□ 0.91
Slx4Q6P1D7 Gm14267-206ENSMUST00000226870 1209 ntBASIC20.73■□□□□ 0.91
Slx4Q6P1D7 Tnni3-201ENSMUST00000098859 912 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Slx4Q6P1D7 Cmpk1-201ENSMUST00000030491 3170 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Slx4Q6P1D7 Ulk3-201ENSMUST00000053230 2826 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Slx4Q6P1D7 Stx5a-202ENSMUST00000073430 2112 ntAPPRIS P2 TSL 1 (best) BASIC20.73■□□□□ 0.91
Slx4Q6P1D7 Kcnq2-207ENSMUST00000103050 2713 ntAPPRIS ALT2 TSL 5 BASIC20.73■□□□□ 0.91
Slx4Q6P1D7 Cldn18-204ENSMUST00000136429 1409 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
Slx4Q6P1D7 Islr2-205ENSMUST00000170421 4071 ntAPPRIS P3 TSL 3 BASIC20.73■□□□□ 0.91
Slx4Q6P1D7 Prr15l-201ENSMUST00000054311 1342 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Slx4Q6P1D7 Olfm1-202ENSMUST00000100244 2686 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
Slx4Q6P1D7 Slc35e2-201ENSMUST00000043829 2910 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Slx4Q6P1D7 Heyl-201ENSMUST00000040821 4537 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Slx4Q6P1D7 Commd1-201ENSMUST00000057843 1459 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
Slx4Q6P1D7 Irf7-203ENSMUST00000106023 2237 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
Slx4Q6P1D7 Atp5d-202ENSMUST00000105366 781 ntTSL 2 BASIC20.72■□□□□ 0.91
Slx4Q6P1D7 Arf4os-201ENSMUST00000166902 566 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
Slx4Q6P1D7 Iqcf6-201ENSMUST00000171091 537 ntAPPRIS P1 TSL 5 BASIC20.72■□□□□ 0.91
Slx4Q6P1D7 Gm26636-201ENSMUST00000181696 1115 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
Slx4Q6P1D7 Gm31256-201ENSMUST00000194705 506 ntBASIC20.72■□□□□ 0.91
Slx4Q6P1D7 Gm18212-201ENSMUST00000211678 889 ntBASIC20.72■□□□□ 0.91
Slx4Q6P1D7 AC069562.3-201ENSMUST00000225387 587 ntBASIC20.72■□□□□ 0.91
Slx4Q6P1D7 Atp6v1g1-201ENSMUST00000035301 1135 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Slx4Q6P1D7 Vmn1r213-201ENSMUST00000076897 1155 ntAPPRIS P2 BASIC20.72■□□□□ 0.91
Slx4Q6P1D7 Ociad2-201ENSMUST00000087195 2554 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Slx4Q6P1D7 Snph-204ENSMUST00000109877 3367 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
Slx4Q6P1D7 Csnk2a2-201ENSMUST00000056919 3773 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Slx4Q6P1D7 Eif4e2-206ENSMUST00000113233 1807 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Slx4Q6P1D7 Catsper4-204ENSMUST00000169381 1506 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
Slx4Q6P1D7 Ncmap-202ENSMUST00000105857 958 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Slx4Q6P1D7 Myl4-202ENSMUST00000106956 900 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Slx4Q6P1D7 Gm15276-201ENSMUST00000145953 498 ntBASIC20.72■□□□□ 0.91
Slx4Q6P1D7 Myl4-201ENSMUST00000018800 879 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Slx4Q6P1D7 Gm44967-201ENSMUST00000207047 631 ntBASIC20.72■□□□□ 0.91
Slx4Q6P1D7 Sertad1-201ENSMUST00000008528 1233 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Slx4Q6P1D7 Det1-202ENSMUST00000107431 1439 ntTSL 5 BASIC20.72■□□□□ 0.91
Slx4Q6P1D7 Fetub-203ENSMUST00000167399 1421 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Slx4Q6P1D7 Acta1-201ENSMUST00000034453 1446 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Slx4Q6P1D7 Cd300lf-202ENSMUST00000106561 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
Slx4Q6P1D7 Evl-203ENSMUST00000109854 1870 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
Slx4Q6P1D7 Pygo2-201ENSMUST00000060061 3198 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Slx4Q6P1D7 Cdc14b-201ENSMUST00000039318 5859 ntAPPRIS P3 TSL 1 (best) BASIC20.71■□□□□ 0.91
Slx4Q6P1D7 Yipf1-201ENSMUST00000075693 1321 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Slx4Q6P1D7 Cstf3-201ENSMUST00000028599 2817 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Slx4Q6P1D7 Sppl2b-201ENSMUST00000035597 2869 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Slx4Q6P1D7 Rtkn-202ENSMUST00000087938 3080 ntAPPRIS P3 TSL 1 (best) BASIC20.71■□□□□ 0.91
Slx4Q6P1D7 Slc6a4-202ENSMUST00000108402 2796 ntAPPRIS P1 TSL 5 BASIC20.71■□□□□ 0.91
Slx4Q6P1D7 9030612E09Rik-201ENSMUST00000053792 1859 ntAPPRIS P1 BASIC20.71■□□□□ 0.91
Slx4Q6P1D7 Gm20488-201ENSMUST00000201641 2996 ntTSL 2 BASIC20.71■□□□□ 0.91
Slx4Q6P1D7 Pga5-201ENSMUST00000025647 1417 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Retrieved 100 of 76,532 protein–RNA pairs in 26 ms