Protein–RNA interactions for Protein: Q64347

Clcn1, Chloride channel protein 1, mousemouse

Predictions only

Length 994 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clcn1Q64347 A230077H06Rik-201ENSMUST00000188579 2918 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Clcn1Q64347 Inha-201ENSMUST00000037330 1475 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Clcn1Q64347 Drd5-201ENSMUST00000041646 3152 ntAPPRIS P1 BASIC17.35■□□□□ 0.37
Clcn1Q64347 Acly-202ENSMUST00000107385 1741 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Clcn1Q64347 Ppp1r1b-206ENSMUST00000150762 1801 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Clcn1Q64347 Pde8a-201ENSMUST00000026672 3802 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Clcn1Q64347 Dhdds-204ENSMUST00000105887 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Clcn1Q64347 Zkscan17-201ENSMUST00000013262 4064 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Clcn1Q64347 Ghr-201ENSMUST00000069451 4175 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Clcn1Q64347 Cdk11b-203ENSMUST00000105600 3170 ntAPPRIS P3 TSL 5 BASIC17.34■□□□□ 0.37
Clcn1Q64347 Alg10b-201ENSMUST00000100309 3727 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Clcn1Q64347 Sowaha-201ENSMUST00000104955 3702 ntAPPRIS P1 BASIC17.34■□□□□ 0.37
Clcn1Q64347 Map3k5-202ENSMUST00000120259 4289 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Clcn1Q64347 Usp27x-203ENSMUST00000191497 4273 ntAPPRIS P1 TSL 2 BASIC17.34■□□□□ 0.37
Clcn1Q64347 Dnaja1-210ENSMUST00000164233 5622 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
Clcn1Q64347 Gnal-201ENSMUST00000025402 5616 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Clcn1Q64347 Paqr9-201ENSMUST00000079597 8367 ntAPPRIS P1 BASIC17.34■□□□□ 0.37
Clcn1Q64347 Tmc8-202ENSMUST00000106334 2644 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Clcn1Q64347 Brd3-203ENSMUST00000113941 5289 ntAPPRIS ALT2 TSL 5 BASIC17.34■□□□□ 0.37
Clcn1Q64347 Gm15371-201ENSMUST00000117057 784 ntBASIC17.34■□□□□ 0.37
Clcn1Q64347 Tmem159-202ENSMUST00000118737 1395 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
Clcn1Q64347 Gm11638-201ENSMUST00000153672 1615 ntTSL 2 BASIC17.34■□□□□ 0.37
Clcn1Q64347 Tmub2-205ENSMUST00000156326 2249 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Clcn1Q64347 Parp10-202ENSMUST00000165738 3367 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Clcn1Q64347 Abhd14a-202ENSMUST00000171678 1262 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Clcn1Q64347 Gm27331-201ENSMUST00000183705 60 ntBASIC17.34■□□□□ 0.37
Clcn1Q64347 Gm5370-201ENSMUST00000187187 574 ntBASIC17.34■□□□□ 0.37
Clcn1Q64347 Olfr1411-202ENSMUST00000190844 1821 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
Clcn1Q64347 Cnga3-203ENSMUST00000194195 2083 ntAPPRIS P3 TSL 5 BASIC17.34■□□□□ 0.37
Clcn1Q64347 Gm42550-201ENSMUST00000201553 960 ntBASIC17.34■□□□□ 0.37
Clcn1Q64347 Gm18222-201ENSMUST00000202416 1387 ntBASIC17.34■□□□□ 0.37
Clcn1Q64347 2810047C21Rik1-202ENSMUST00000210322 1179 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Clcn1Q64347 Gm45880-201ENSMUST00000213041 853 ntBASIC17.34■□□□□ 0.37
Clcn1Q64347 AC168058.1-201ENSMUST00000219521 2282 ntBASIC17.34■□□□□ 0.37
Clcn1Q64347 Net1-207ENSMUST00000223258 597 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Clcn1Q64347 Clps-201ENSMUST00000025062 550 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Clcn1Q64347 Klc2-201ENSMUST00000025798 2940 ntTSL 5 BASIC17.34■□□□□ 0.37
Clcn1Q64347 Olfr463-201ENSMUST00000081417 936 ntAPPRIS P1 BASIC17.34■□□□□ 0.37
Clcn1Q64347 Tcf25-208ENSMUST00000212571 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Clcn1Q64347 Pcdha1-201ENSMUST00000070797 5248 ntAPPRIS P2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Clcn1Q64347 Nr2f1-205ENSMUST00000150498 2588 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Clcn1Q64347 AC126549.2-201ENSMUST00000223997 1976 ntBASIC17.33■□□□□ 0.37
Clcn1Q64347 Mypn-202ENSMUST00000218978 1833 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
Clcn1Q64347 Gm26747-201ENSMUST00000180597 1716 ntTSL 5 BASIC17.33■□□□□ 0.37
Clcn1Q64347 Tbkbp1-201ENSMUST00000066078 3338 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.37
Clcn1Q64347 Cfp-201ENSMUST00000001156 1636 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Clcn1Q64347 Kdm3a-201ENSMUST00000065509 4816 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Clcn1Q64347 Syngr2-201ENSMUST00000026649 1520 ntAPPRIS P2 TSL 1 (best) BASIC17.33■□□□□ 0.37
Clcn1Q64347 Stat3-201ENSMUST00000092671 2927 ntAPPRIS ALT1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Clcn1Q64347 Mrc2-202ENSMUST00000100335 5795 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Clcn1Q64347 4632404H12Rik-201ENSMUST00000038450 2791 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Clcn1Q64347 Creld2-201ENSMUST00000024042 1364 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Clcn1Q64347 Mgat1-202ENSMUST00000101293 2729 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Clcn1Q64347 Arl5c-202ENSMUST00000107563 823 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Clcn1Q64347 Irak1-204ENSMUST00000114352 3825 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.36
Clcn1Q64347 1700069L16Rik-203ENSMUST00000162388 706 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
Clcn1Q64347 Mir8109-201ENSMUST00000184375 117 ntBASIC17.33■□□□□ 0.36
Clcn1Q64347 Gm29741-201ENSMUST00000192667 421 ntBASIC17.33■□□□□ 0.36
Clcn1Q64347 Sox2ot-208ENSMUST00000197103 802 ntTSL 2 BASIC17.33■□□□□ 0.36
Clcn1Q64347 9130604C24Rik-201ENSMUST00000197965 956 ntBASIC17.33■□□□□ 0.36
Clcn1Q64347 Nme2-201ENSMUST00000021217 1012 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Clcn1Q64347 Ankrd24-201ENSMUST00000119336 3561 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.36
Clcn1Q64347 Slc5a2-202ENSMUST00000118169 2277 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Clcn1Q64347 Foxo6os-201ENSMUST00000152384 2291 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Clcn1Q64347 Spns1-201ENSMUST00000032994 2219 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Clcn1Q64347 Rcan1-201ENSMUST00000023672 2192 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Clcn1Q64347 Ppp2r2c-201ENSMUST00000031003 4088 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Clcn1Q64347 Sema3b-201ENSMUST00000073448 2987 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Clcn1Q64347 Prdm10-202ENSMUST00000117389 1952 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Clcn1Q64347 Enpp1-203ENSMUST00000135846 2721 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
Clcn1Q64347 Celf4-203ENSMUST00000223704 2492 ntAPPRIS ALT1 BASIC17.32■□□□□ 0.36
Clcn1Q64347 Ssbp2-201ENSMUST00000004094 3957 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Clcn1Q64347 Ppp1r3g-201ENSMUST00000132661 2361 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Clcn1Q64347 Ddx4-202ENSMUST00000099166 3012 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Clcn1Q64347 Tcf4-253ENSMUST00000202610 1959 ntTSL 5 BASIC17.32■□□□□ 0.36
Clcn1Q64347 Pcdha5-201ENSMUST00000192168 5206 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Clcn1Q64347 4933409G03Rik-201ENSMUST00000102713 1263 ntAPPRIS P2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Clcn1Q64347 Mrpl2-203ENSMUST00000113430 991 ntAPPRIS ALT2 TSL 5 BASIC17.32■□□□□ 0.36
Clcn1Q64347 Gm12347-201ENSMUST00000127883 470 ntTSL 3 BASIC17.32■□□□□ 0.36
Clcn1Q64347 Gm5161-201ENSMUST00000075243 853 ntBASIC17.32■□□□□ 0.36
Clcn1Q64347 Arvcf-205ENSMUST00000115614 4698 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Clcn1Q64347 Ank1-208ENSMUST00000121075 1740 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Clcn1Q64347 Mdfic-201ENSMUST00000101663 3431 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Clcn1Q64347 Mdfic-207ENSMUST00000190255 3431 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Clcn1Q64347 Lrrc14-210ENSMUST00000155735 2286 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
Clcn1Q64347 Gcnt4-201ENSMUST00000171324 5087 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Clcn1Q64347 Ube2g1-203ENSMUST00000138247 3931 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Clcn1Q64347 Gpc6-201ENSMUST00000078849 1668 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
Clcn1Q64347 Adat1-203ENSMUST00000139820 2762 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Clcn1Q64347 Ubqln2-201ENSMUST00000060714 3344 ntAPPRIS P1 BASIC17.32■□□□□ 0.36
Clcn1Q64347 Camta1-203ENSMUST00000105668 4962 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Clcn1Q64347 Shank1-202ENSMUST00000107935 6649 ntAPPRIS ALT2 TSL 5 BASIC17.32■□□□□ 0.36
Clcn1Q64347 Slc25a25-204ENSMUST00000113308 2643 ntTSL 5 BASIC17.32■□□□□ 0.36
Clcn1Q64347 Bahd1-201ENSMUST00000036578 4594 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Clcn1Q64347 BC003965-201ENSMUST00000088307 3022 ntAPPRIS P1 TSL 2 BASIC17.31■□□□□ 0.36
Clcn1Q64347 Mtfr2-201ENSMUST00000169712 1991 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Clcn1Q64347 Rtf1-201ENSMUST00000028767 4664 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Clcn1Q64347 F830212C03Rik-201ENSMUST00000191701 2285 ntBASIC17.31■□□□□ 0.36
Clcn1Q64347 Galnt6-203ENSMUST00000161514 2746 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Clcn1Q64347 H2-DMb2-201ENSMUST00000041982 1347 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Retrieved 100 of 76,532 protein–RNA pairs in 39.6 ms