Protein–RNA interactions for Protein: Q61473

Sox17, Transcription factor SOX-17, mousemouse

Predictions only

Length 419 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox17Q61473 Tbc1d9b-201ENSMUST00000093138 4407 ntAPPRIS P3 TSL 1 (best) BASIC12.86□□□□□ -0.35
Sox17Q61473 Ano6-208ENSMUST00000227791 3149 ntAPPRIS ALT2 BASIC12.86□□□□□ -0.35
Sox17Q61473 Cpeb1-201ENSMUST00000098331 3111 ntAPPRIS P3 TSL 1 (best) BASIC12.86□□□□□ -0.35
Sox17Q61473 Esyt3-201ENSMUST00000042158 4483 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Sox17Q61473 Dnm1-202ENSMUST00000091089 3764 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Sox17Q61473 Bmp4-201ENSMUST00000074077 2064 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Sox17Q61473 Myh7-201ENSMUST00000102803 6135 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Sox17Q61473 Pik3r6-202ENSMUST00000102613 3225 ntAPPRIS P3 TSL 1 (best) BASIC12.85□□□□□ -0.35
Sox17Q61473 Cct3-ps1-201ENSMUST00000118023 1647 ntBASIC12.85□□□□□ -0.35
Sox17Q61473 Dtd1-201ENSMUST00000028917 1350 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Sox17Q61473 Mfsd14b-201ENSMUST00000054730 3251 ntAPPRIS P1 TSL 5 BASIC12.85□□□□□ -0.35
Sox17Q61473 Sumf2-204ENSMUST00000171300 2264 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Sox17Q61473 Slc16a2-201ENSMUST00000042664 4152 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Sox17Q61473 Slc25a14-201ENSMUST00000033431 1760 ntAPPRIS P3 TSL 1 (best) BASIC12.85□□□□□ -0.35
Sox17Q61473 Nrp2-204ENSMUST00000102822 6708 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Sox17Q61473 Kcnc1-203ENSMUST00000160433 3156 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Sox17Q61473 Olfr667-202ENSMUST00000217177 2695 ntAPPRIS P1 TSL 5 BASIC12.85□□□□□ -0.35
Sox17Q61473 Gm12350-201ENSMUST00000121208 462 ntBASIC12.85□□□□□ -0.35
Sox17Q61473 Hoxa7-202ENSMUST00000134367 807 ntTSL 5 BASIC12.85□□□□□ -0.35
Sox17Q61473 Pcp2-205ENSMUST00000142431 524 ntTSL 2 BASIC12.85□□□□□ -0.35
Sox17Q61473 Gm11535-201ENSMUST00000145517 778 ntTSL 3 BASIC12.85□□□□□ -0.35
Sox17Q61473 Ighv8-7-201ENSMUST00000194349 297 ntBASIC12.85□□□□□ -0.35
Sox17Q61473 Vkorc1-203ENSMUST00000206053 606 ntTSL 3 BASIC12.85□□□□□ -0.35
Sox17Q61473 Gm44608-201ENSMUST00000206827 855 ntBASIC12.85□□□□□ -0.35
Sox17Q61473 Ndufs6-203ENSMUST00000222930 512 ntTSL 3 BASIC12.85□□□□□ -0.35
Sox17Q61473 AC154222.1-201ENSMUST00000223882 475 ntBASIC12.85□□□□□ -0.35
Sox17Q61473 AC090659.1-201ENSMUST00000224334 768 ntBASIC12.85□□□□□ -0.35
Sox17Q61473 Caly-201ENSMUST00000026541 1220 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Sox17Q61473 Olfr324-201ENSMUST00000054683 1122 ntAPPRIS P2 BASIC12.85□□□□□ -0.35
Sox17Q61473 Manbal-201ENSMUST00000081202 1107 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Sox17Q61473 Nynrin-202ENSMUST00000168479 7511 ntAPPRIS P1 TSL 5 BASIC12.85□□□□□ -0.35
Sox17Q61473 0610009O20Rik-201ENSMUST00000025314 2404 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Sox17Q61473 Fastkd3-201ENSMUST00000051784 2421 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Sox17Q61473 Psmd11-201ENSMUST00000017572 2848 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Sox17Q61473 Zfp354a-202ENSMUST00000102766 2592 ntAPPRIS P3 TSL 1 (best) BASIC12.85□□□□□ -0.35
Sox17Q61473 Krt36-201ENSMUST00000107416 1671 ntAPPRIS P1 TSL 5 BASIC12.85□□□□□ -0.35
Sox17Q61473 Bysl-201ENSMUST00000024783 3854 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Sox17Q61473 Ptpn6-201ENSMUST00000004377 2308 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Sox17Q61473 Abcb6-201ENSMUST00000027396 2966 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Sox17Q61473 Dpysl5-203ENSMUST00000114729 5191 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Sox17Q61473 Krt18-201ENSMUST00000023803 1400 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Sox17Q61473 AC158633.2-201ENSMUST00000222959 6046 ntTSL 5 BASIC12.85□□□□□ -0.35
Sox17Q61473 Laptm5-207ENSMUST00000151698 2600 ntAPPRIS P2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Sox17Q61473 Dnajc22-201ENSMUST00000061295 1564 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Sox17Q61473 Pdlim5-208ENSMUST00000196220 1725 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Sox17Q61473 Cbx6-202ENSMUST00000109625 3056 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Sox17Q61473 Gm13814-201ENSMUST00000141341 3077 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Sox17Q61473 Heg1-201ENSMUST00000126532 6714 ntAPPRIS P5 TSL 5 BASIC12.84□□□□□ -0.35
Sox17Q61473 Eme1-201ENSMUST00000039949 2444 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Sox17Q61473 Smg7-203ENSMUST00000111836 3928 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Sox17Q61473 Spatc1-201ENSMUST00000074173 1605 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Sox17Q61473 Lpar2-202ENSMUST00000164890 5800 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Sox17Q61473 Scg3-202ENSMUST00000213324 2152 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Sox17Q61473 Vwa3b-202ENSMUST00000067178 1769 ntAPPRIS P5 TSL 2 BASIC12.84□□□□□ -0.35
Sox17Q61473 Cd34-201ENSMUST00000016638 2454 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Sox17Q61473 Ubqln5-201ENSMUST00000053743 1915 ntAPPRIS P1 BASIC12.84□□□□□ -0.35
Sox17Q61473 Syne4-201ENSMUST00000054594 1355 ntAPPRIS P3 TSL 1 (best) BASIC12.84□□□□□ -0.35
Sox17Q61473 Atat1-201ENSMUST00000056034 1930 ntAPPRIS P3 TSL 1 (best) BASIC12.84□□□□□ -0.35
Sox17Q61473 Ubqln1-202ENSMUST00000076454 3561 ntAPPRIS P3 TSL 1 (best) BASIC12.84□□□□□ -0.35
Sox17Q61473 Nr4a3-201ENSMUST00000030025 5720 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Sox17Q61473 4930458D05Rik-201ENSMUST00000142871 3055 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Sox17Q61473 Hsd3b7-201ENSMUST00000046863 1828 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Sox17Q61473 Cpt2-203ENSMUST00000106720 1015 ntTSL 2 BASIC12.84□□□□□ -0.35
Sox17Q61473 Necab1-202ENSMUST00000108273 2135 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Sox17Q61473 Btn1a1-202ENSMUST00000110434 1077 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Sox17Q61473 Wdr45-225ENSMUST00000208443 1172 ntTSL 5 BASIC12.84□□□□□ -0.35
Sox17Q61473 AC139350.3-201ENSMUST00000226151 420 ntBASIC12.84□□□□□ -0.35
Sox17Q61473 Eef1akmt2-201ENSMUST00000033257 1107 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Sox17Q61473 Nutf2-201ENSMUST00000008594 948 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Sox17Q61473 Arhgap10-202ENSMUST00000210519 2295 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Sox17Q61473 Rab3a-204ENSMUST00000110093 1442 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Sox17Q61473 Kdm4b-201ENSMUST00000025036 4577 ntAPPRIS P2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Sox17Q61473 Gm2115-201ENSMUST00000180387 7055 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Sox17Q61473 Celf5-203ENSMUST00000120508 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Sox17Q61473 Ahcyl2-205ENSMUST00000125911 2039 ntTSL 5 BASIC12.84□□□□□ -0.35
Sox17Q61473 Rsbn1-201ENSMUST00000051139 4762 ntAPPRIS P2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Sox17Q61473 AC116503.1-201ENSMUST00000215445 2192 ntBASIC12.84□□□□□ -0.35
Sox17Q61473 Bcl2-201ENSMUST00000112751 7191 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Sox17Q61473 Gm11611-201ENSMUST00000134289 1326 ntTSL 3 BASIC12.84□□□□□ -0.35
Sox17Q61473 Zfp319-201ENSMUST00000057717 7232 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Sox17Q61473 Prnd-203ENSMUST00000110171 1938 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Sox17Q61473 Slc12a8-202ENSMUST00000117134 2081 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Sox17Q61473 Aifm3-201ENSMUST00000023448 2688 ntAPPRIS P3 TSL 1 (best) BASIC12.84□□□□□ -0.35
Sox17Q61473 Fam160a2-201ENSMUST00000048079 3443 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Sox17Q61473 Ephb3-201ENSMUST00000006112 4185 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Sox17Q61473 Map4k2-201ENSMUST00000025897 4644 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Sox17Q61473 Dync1i1-204ENSMUST00000115559 2599 ntAPPRIS P3 TSL 1 (best) BASIC12.83□□□□□ -0.35
Sox17Q61473 Gm26593-201ENSMUST00000181848 1970 ntTSL 5 BASIC12.83□□□□□ -0.35
Sox17Q61473 Bcat2-202ENSMUST00000120864 1536 ntTSL 5 BASIC12.83□□□□□ -0.35
Sox17Q61473 Hvcn1-201ENSMUST00000072602 2790 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Sox17Q61473 Ciz1-202ENSMUST00000113331 2604 ntAPPRIS ALT2 TSL 5 BASIC12.83□□□□□ -0.36
Sox17Q61473 Fbxl12-203ENSMUST00000131128 4182 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Sox17Q61473 Nup88-203ENSMUST00000108531 2453 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Sox17Q61473 2900089D17Rik-201ENSMUST00000124015 2475 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Sox17Q61473 Acin1-221ENSMUST00000150371 2494 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Sox17Q61473 Polr2a-202ENSMUST00000071213 5799 ntTSL 5 BASIC12.83□□□□□ -0.36
Sox17Q61473 Fhl4-202ENSMUST00000216889 1860 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Sox17Q61473 Klhl26-201ENSMUST00000066597 2991 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Sox17Q61473 Rnf224-202ENSMUST00000205192 1707 ntAPPRIS P1 BASIC12.83□□□□□ -0.36
Sox17Q61473 Cnot3-201ENSMUST00000038913 2822 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 48.5 ms