Protein–RNA interactions for Protein: Q61216

Mre11, Double-strand break repair protein MRE11, mousemouse

Predictions only

Length 706 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mre11Q61216 Clcnka-202ENSMUST00000105790 2511 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Mre11Q61216 Snx12-202ENSMUST00000120389 2415 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Mre11Q61216 Sqle-201ENSMUST00000022977 2758 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Mre11Q61216 Gm25990-201ENSMUST00000102440 86 ntBASIC16.43■□□□□ 0.22
Mre11Q61216 Gm5678-201ENSMUST00000120115 939 ntAPPRIS P1 TSL 5 BASIC16.43■□□□□ 0.22
Mre11Q61216 Psmc4-206ENSMUST00000140053 1244 ntTSL 5 BASIC16.43■□□□□ 0.22
Mre11Q61216 Rnf5-201ENSMUST00000015622 1238 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Mre11Q61216 Vmn1r-ps10-201ENSMUST00000176165 889 ntBASIC16.43■□□□□ 0.22
Mre11Q61216 Arhgap33-206ENSMUST00000208522 781 ntTSL 3 BASIC16.43■□□□□ 0.22
Mre11Q61216 Gm44930-202ENSMUST00000208733 689 ntTSL 5 BASIC16.43■□□□□ 0.22
Mre11Q61216 AC153937.1-201ENSMUST00000218734 412 ntBASIC16.43■□□□□ 0.22
Mre11Q61216 Zfyve21-206ENSMUST00000222843 705 ntTSL 3 BASIC16.43■□□□□ 0.22
Mre11Q61216 Ndufv2-201ENSMUST00000024909 927 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Mre11Q61216 Aurkaip1-201ENSMUST00000084097 1159 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Mre11Q61216 Gtf2a1l-201ENSMUST00000024970 1621 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Mre11Q61216 Pik3r1-201ENSMUST00000035532 2923 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Mre11Q61216 2310022A10Rik-204ENSMUST00000187032 1871 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
Mre11Q61216 Pimreg-201ENSMUST00000021164 1513 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Mre11Q61216 Inpp5e-205ENSMUST00000145701 4147 ntAPPRIS P3 TSL 1 (best) BASIC16.43■□□□□ 0.22
Mre11Q61216 Fam214b-201ENSMUST00000036462 3074 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Mre11Q61216 Eps8l3-201ENSMUST00000037375 2271 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Mre11Q61216 Gli2-201ENSMUST00000062483 6637 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Mre11Q61216 Gm45751-201ENSMUST00000210185 1573 ntBASIC16.43■□□□□ 0.22
Mre11Q61216 Csrnp3-202ENSMUST00000112394 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
Mre11Q61216 Opa1-206ENSMUST00000160597 6230 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Mre11Q61216 AC137842.1-201ENSMUST00000227896 2064 ntBASIC16.42■□□□□ 0.22
Mre11Q61216 Chodl-202ENSMUST00000069148 2051 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Mre11Q61216 Pde12-201ENSMUST00000052932 7725 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Mre11Q61216 Zkscan14-203ENSMUST00000198959 2243 ntBASIC16.42■□□□□ 0.22
Mre11Q61216 Dlgap3-203ENSMUST00000106094 4207 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Mre11Q61216 Psd-210ENSMUST00000225323 3398 ntAPPRIS ALT2 BASIC16.42■□□□□ 0.22
Mre11Q61216 Gpd1l-202ENSMUST00000129305 2543 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Mre11Q61216 Cux2-210ENSMUST00000168288 4697 ntAPPRIS P1 TSL 5 BASIC16.42■□□□□ 0.22
Mre11Q61216 Pcdhgc3-201ENSMUST00000076807 4687 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Mre11Q61216 Nelfcd-202ENSMUST00000109075 2279 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Mre11Q61216 Parp3-202ENSMUST00000112479 2030 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
Mre11Q61216 Erlin1-206ENSMUST00000170801 3172 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Mre11Q61216 Dnajc8-206ENSMUST00000105940 772 ntTSL 5 BASIC16.42■□□□□ 0.22
Mre11Q61216 B9d2-201ENSMUST00000108403 1021 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Mre11Q61216 Gm20815-201ENSMUST00000115496 1224 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Mre11Q61216 Gm7153-201ENSMUST00000117092 455 ntBASIC16.42■□□□□ 0.22
Mre11Q61216 Six3os1-205ENSMUST00000175913 791 ntTSL 3 BASIC16.42■□□□□ 0.22
Mre11Q61216 9530052E02Rik-201ENSMUST00000180750 949 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Mre11Q61216 Gm27741-201ENSMUST00000185060 237 ntBASIC16.42■□□□□ 0.22
Mre11Q61216 Gm21812-202ENSMUST00000188908 1224 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Mre11Q61216 Gm29520-201ENSMUST00000191209 1067 ntTSL 5 BASIC16.42■□□□□ 0.22
Mre11Q61216 Ankrd23-204ENSMUST00000194853 1073 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Mre11Q61216 Gm10419-203ENSMUST00000197854 653 ntTSL 5 BASIC16.42■□□□□ 0.22
Mre11Q61216 Abhd18-206ENSMUST00000203650 797 ntTSL 5 BASIC16.42■□□□□ 0.22
Mre11Q61216 Ndufs8-201ENSMUST00000075092 963 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Mre11Q61216 Clpx-202ENSMUST00000113824 2809 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Mre11Q61216 Sorbs3-202ENSMUST00000227259 2481 ntAPPRIS ALT2 BASIC16.42■□□□□ 0.22
Mre11Q61216 Grk3-203ENSMUST00000197776 1570 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Mre11Q61216 Adamts20-204ENSMUST00000155907 6886 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Mre11Q61216 Wdr70-201ENSMUST00000045766 2126 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Mre11Q61216 Hlf-201ENSMUST00000004051 5642 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Mre11Q61216 Gm45643-201ENSMUST00000211364 1484 ntBASIC16.42■□□□□ 0.22
Mre11Q61216 R3hcc1-206ENSMUST00000216152 1467 ntAPPRIS P2 TSL 1 (best) BASIC16.42■□□□□ 0.22
Mre11Q61216 Pla2g15-204ENSMUST00000212963 2578 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Mre11Q61216 Esyt3-201ENSMUST00000042158 4483 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Mre11Q61216 Exoc6b-203ENSMUST00000160197 5439 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Mre11Q61216 Lrrc7-205ENSMUST00000200137 7321 ntAPPRIS P2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Mre11Q61216 Rbm42-201ENSMUST00000042726 1784 ntAPPRIS P2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Mre11Q61216 Ptpn6-201ENSMUST00000004377 2308 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Mre11Q61216 Gpat3-201ENSMUST00000031255 2884 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Mre11Q61216 Ybx2-202ENSMUST00000108601 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Mre11Q61216 Zfp125-201ENSMUST00000079237 2488 ntBASIC16.41■□□□□ 0.22
Mre11Q61216 Wnt9a-201ENSMUST00000000128 3320 ntAPPRIS ALT2 TSL 5 BASIC16.41■□□□□ 0.22
Mre11Q61216 Msh4-201ENSMUST00000005630 3325 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
Mre11Q61216 Phka1-206ENSMUST00000122022 6115 ntAPPRIS ALT2 TSL 5 BASIC16.41■□□□□ 0.22
Mre11Q61216 Phka1-202ENSMUST00000052012 6115 ntAPPRIS P4 TSL 1 (best) BASIC16.41■□□□□ 0.22
Mre11Q61216 Il7-205ENSMUST00000194279 4858 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Mre11Q61216 Rbfox2-202ENSMUST00000111581 3072 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Mre11Q61216 Scube1-203ENSMUST00000076060 3913 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Mre11Q61216 Tmem204-201ENSMUST00000024984 1846 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Mre11Q61216 Rtn4-203ENSMUST00000102841 4060 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Mre11Q61216 Prpf40a-206ENSMUST00000209364 2833 ntAPPRIS ALT2 TSL 5 BASIC16.41■□□□□ 0.22
Mre11Q61216 Nudt1-204ENSMUST00000110826 606 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Mre11Q61216 Chchd7-205ENSMUST00000120732 711 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Mre11Q61216 Rpl34-ps1-201ENSMUST00000121998 354 ntBASIC16.41■□□□□ 0.22
Mre11Q61216 Gm11750-201ENSMUST00000146016 583 ntTSL 5 BASIC16.41■□□□□ 0.22
Mre11Q61216 Syne4-208ENSMUST00000176304 1006 ntAPPRIS ALT2 TSL 5 BASIC16.41■□□□□ 0.22
Mre11Q61216 Rpl34-ps2-201ENSMUST00000081679 354 ntBASIC16.41■□□□□ 0.22
Mre11Q61216 Gm10154-201ENSMUST00000084445 354 ntBASIC16.41■□□□□ 0.22
Mre11Q61216 Ephb3-201ENSMUST00000006112 4185 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Mre11Q61216 Sh3bp5l-202ENSMUST00000116376 3016 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Mre11Q61216 Wdr13-205ENSMUST00000130832 4374 ntTSL 5 BASIC16.41■□□□□ 0.22
Mre11Q61216 Eya1-203ENSMUST00000168081 4366 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Mre11Q61216 Ctbs-201ENSMUST00000029840 2629 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
Mre11Q61216 Syt2-204ENSMUST00000188842 3386 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Mre11Q61216 Arpc4-203ENSMUST00000203578 1323 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Mre11Q61216 Canx-205ENSMUST00000179865 4281 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Mre11Q61216 Treh-202ENSMUST00000071219 1927 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Mre11Q61216 Cebpd-201ENSMUST00000096232 3746 ntAPPRIS P1 BASIC16.41■□□□□ 0.22
Mre11Q61216 Fbxl12-203ENSMUST00000131128 4182 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Mre11Q61216 Elf1-201ENSMUST00000040131 4235 ntAPPRIS P2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Mre11Q61216 Sh3bp2-201ENSMUST00000067638 2885 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
Mre11Q61216 Gapvd1-202ENSMUST00000102800 8339 ntAPPRIS P2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Mre11Q61216 Ccdc81-201ENSMUST00000041195 2439 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Mre11Q61216 Lancl1-203ENSMUST00000119559 1385 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Retrieved 100 of 76,532 protein–RNA pairs in 50.7 ms