Protein–RNA interactions for Protein: Q4FJU9

Tmem40, Transmembrane protein 40, mousemouse

Predictions only

Length 225 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tmem40Q4FJU9 Egfem1-201ENSMUST00000118531 1779 ntAPPRIS ALT2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Tmem40Q4FJU9 Nfe2-207ENSMUST00000134554 1761 ntAPPRIS P1 TSL 2 BASIC11.75□□□□□ -0.53
Tmem40Q4FJU9 Aqp3-201ENSMUST00000055327 1765 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Tmem40Q4FJU9 Rab3c-202ENSMUST00000223922 2398 ntBASIC11.75□□□□□ -0.53
Tmem40Q4FJU9 Mfn2-202ENSMUST00000105714 2427 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Tmem40Q4FJU9 Tdrp-201ENSMUST00000062613 2463 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Tmem40Q4FJU9 Hps5-201ENSMUST00000014562 4953 ntAPPRIS P3 TSL 1 (best) BASIC11.75□□□□□ -0.53
Tmem40Q4FJU9 Skap1-205ENSMUST00000107662 1861 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Tmem40Q4FJU9 Rdx-201ENSMUST00000000590 4380 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Tmem40Q4FJU9 Ints3-203ENSMUST00000196530 3778 ntAPPRIS ALT2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Tmem40Q4FJU9 Nfasc-201ENSMUST00000043189 5072 ntAPPRIS ALT2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Tmem40Q4FJU9 Tmem176b-201ENSMUST00000101429 1238 ntAPPRIS P1 TSL 5 BASIC11.75□□□□□ -0.53
Tmem40Q4FJU9 Gm5303-201ENSMUST00000117943 1252 ntBASIC11.75□□□□□ -0.53
Tmem40Q4FJU9 Mrpl40-202ENSMUST00000119273 778 ntTSL 3 BASIC11.75□□□□□ -0.53
Tmem40Q4FJU9 3000002C10Rik-202ENSMUST00000133495 1008 ntBASIC11.75□□□□□ -0.53
Tmem40Q4FJU9 Gm15755-201ENSMUST00000133698 659 ntTSL 3 BASIC11.75□□□□□ -0.53
Tmem40Q4FJU9 Gm833-201ENSMUST00000143133 884 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Tmem40Q4FJU9 Mir1982-201ENSMUST00000157368 74 ntBASIC11.75□□□□□ -0.53
Tmem40Q4FJU9 Rps19-ps13-201ENSMUST00000180504 441 ntBASIC11.75□□□□□ -0.53
Tmem40Q4FJU9 AC153872.1-201ENSMUST00000199539 128 ntBASIC11.75□□□□□ -0.53
Tmem40Q4FJU9 Gm45841-201ENSMUST00000207700 164 ntBASIC11.75□□□□□ -0.53
Tmem40Q4FJU9 AC099934.3-201ENSMUST00000223192 1147 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Tmem40Q4FJU9 CT009495.1-201ENSMUST00000224221 862 ntBASIC11.75□□□□□ -0.53
Tmem40Q4FJU9 Snx24-201ENSMUST00000025417 994 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Tmem40Q4FJU9 Dpm3-201ENSMUST00000040824 404 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Tmem40Q4FJU9 Amhr2-201ENSMUST00000023809 1938 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Tmem40Q4FJU9 Zbtb49-202ENSMUST00000114113 2645 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Tmem40Q4FJU9 Snrpa-202ENSMUST00000122202 1336 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Tmem40Q4FJU9 AC114008.2-201ENSMUST00000227699 1347 ntBASIC11.75□□□□□ -0.53
Tmem40Q4FJU9 Thnsl2-202ENSMUST00000160918 2077 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Tmem40Q4FJU9 Wls-205ENSMUST00000198878 2050 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Tmem40Q4FJU9 Miat-205ENSMUST00000182953 9163 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Tmem40Q4FJU9 Ppp1r15a-202ENSMUST00000167273 2809 ntAPPRIS P1 TSL 2 BASIC11.75□□□□□ -0.53
Tmem40Q4FJU9 Gm9109-201ENSMUST00000120254 1405 ntBASIC11.75□□□□□ -0.53
Tmem40Q4FJU9 Vamp2-201ENSMUST00000021273 2205 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Tmem40Q4FJU9 Rab18-201ENSMUST00000097680 2257 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Tmem40Q4FJU9 Ccdc85a-201ENSMUST00000042534 5332 ntAPPRIS ALT2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Tmem40Q4FJU9 Pdlim3-201ENSMUST00000034053 1604 ntAPPRIS P2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Tmem40Q4FJU9 Rusc1-201ENSMUST00000052539 3316 ntAPPRIS ALT2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Tmem40Q4FJU9 4933434E20Rik-206ENSMUST00000160640 2510 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Tmem40Q4FJU9 P2rx3-202ENSMUST00000111613 1764 ntAPPRIS ALT1 TSL 5 BASIC11.74□□□□□ -0.53
Tmem40Q4FJU9 Lancl1-202ENSMUST00000113979 4461 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Tmem40Q4FJU9 Syt10-201ENSMUST00000029441 1845 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Tmem40Q4FJU9 AC121801.1-201ENSMUST00000225363 1899 ntBASIC11.74□□□□□ -0.53
Tmem40Q4FJU9 Phgdh-201ENSMUST00000065793 1893 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Tmem40Q4FJU9 Igsf8-204ENSMUST00000139528 2866 ntTSL 2 BASIC11.74□□□□□ -0.53
Tmem40Q4FJU9 Cobll1-201ENSMUST00000090896 4867 ntAPPRIS ALT2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Tmem40Q4FJU9 Ablim3-201ENSMUST00000049378 4532 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Tmem40Q4FJU9 Muc20-201ENSMUST00000041123 2299 ntAPPRIS ALT2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Tmem40Q4FJU9 Uba3-201ENSMUST00000089287 2257 ntAPPRIS P4 TSL 1 (best) BASIC11.74□□□□□ -0.53
Tmem40Q4FJU9 Casc4-203ENSMUST00000089915 3475 ntTSL 2 BASIC11.74□□□□□ -0.53
Tmem40Q4FJU9 5830432E09Rik-203ENSMUST00000210953 2428 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Tmem40Q4FJU9 Rapgef3os2-201ENSMUST00000124374 920 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Tmem40Q4FJU9 Ift20-203ENSMUST00000128788 1141 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Tmem40Q4FJU9 Gm15787-203ENSMUST00000130892 1250 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Tmem40Q4FJU9 1700012C14Rik-201ENSMUST00000132023 498 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Tmem40Q4FJU9 Gas5-210ENSMUST00000159706 557 ntTSL 2 BASIC11.74□□□□□ -0.53
Tmem40Q4FJU9 Naxd-205ENSMUST00000178721 1108 ntTSL 5 BASIC11.74□□□□□ -0.53
Tmem40Q4FJU9 1700037F24Rik-201ENSMUST00000181254 973 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Tmem40Q4FJU9 Nabp1-202ENSMUST00000185534 708 ntTSL 2 BASIC11.74□□□□□ -0.53
Tmem40Q4FJU9 Gm18307-201ENSMUST00000206864 949 ntBASIC11.74□□□□□ -0.53
Tmem40Q4FJU9 AC172027.1-201ENSMUST00000217659 337 ntBASIC11.74□□□□□ -0.53
Tmem40Q4FJU9 AC153361.2-203ENSMUST00000218083 661 ntTSL 3 BASIC11.74□□□□□ -0.53
Tmem40Q4FJU9 Gm5178-201ENSMUST00000219380 898 ntBASIC11.74□□□□□ -0.53
Tmem40Q4FJU9 4930518P08Rik-201ENSMUST00000221281 1187 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Tmem40Q4FJU9 Kcnk9-201ENSMUST00000044624 1209 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Tmem40Q4FJU9 Atpif1-201ENSMUST00000067496 539 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Tmem40Q4FJU9 Grip2-205ENSMUST00000162300 5206 ntAPPRIS P2 TSL 5 BASIC11.74□□□□□ -0.53
Tmem40Q4FJU9 Prok2-202ENSMUST00000032152 1423 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Tmem40Q4FJU9 Brpf1-209ENSMUST00000204198 4307 ntTSL 5 BASIC11.74□□□□□ -0.53
Tmem40Q4FJU9 Myo9b-203ENSMUST00000170242 7297 ntAPPRIS ALT2 TSL 5 BASIC11.74□□□□□ -0.53
Tmem40Q4FJU9 Cyp2d11-201ENSMUST00000170255 1590 ntAPPRIS P1 TSL 5 BASIC11.74□□□□□ -0.53
Tmem40Q4FJU9 Dnajc5g-201ENSMUST00000066544 1565 ntAPPRIS P3 TSL 1 (best) BASIC11.74□□□□□ -0.53
Tmem40Q4FJU9 Psrc1-202ENSMUST00000102629 1687 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Tmem40Q4FJU9 Morn1-201ENSMUST00000030915 1659 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Tmem40Q4FJU9 Tap2-201ENSMUST00000025197 3442 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Tmem40Q4FJU9 Gm13111-201ENSMUST00000136217 3542 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Tmem40Q4FJU9 4933421O10Rik-201ENSMUST00000155691 3847 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Tmem40Q4FJU9 Gm26847-201ENSMUST00000180407 2109 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Tmem40Q4FJU9 Riox2-201ENSMUST00000023407 2159 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Tmem40Q4FJU9 Eef2kmt-201ENSMUST00000064635 2170 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Tmem40Q4FJU9 Atp2a3-207ENSMUST00000163326 4606 ntAPPRIS ALT2 TSL 5 BASIC11.74□□□□□ -0.53
Tmem40Q4FJU9 Bbs7-203ENSMUST00000108156 2687 ntAPPRIS P2 TSL 1 (best) BASIC11.73□□□□□ -0.53
Tmem40Q4FJU9 Pja1-205ENSMUST00000167246 2666 ntAPPRIS P4 TSL 1 (best) BASIC11.73□□□□□ -0.53
Tmem40Q4FJU9 Anks1b-204ENSMUST00000179337 2692 ntTSL 5 BASIC11.73□□□□□ -0.53
Tmem40Q4FJU9 Thumpd1-201ENSMUST00000033236 2689 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Tmem40Q4FJU9 Gna13-201ENSMUST00000020930 6160 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Tmem40Q4FJU9 Smtnl2-202ENSMUST00000108500 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC11.73□□□□□ -0.53
Tmem40Q4FJU9 Spred2-202ENSMUST00000093299 4449 ntTSL 5 BASIC11.73□□□□□ -0.53
Tmem40Q4FJU9 Myo1c-204ENSMUST00000108431 4718 ntAPPRIS P2 TSL 1 (best) BASIC11.73□□□□□ -0.53
Tmem40Q4FJU9 Zfp553-202ENSMUST00000106312 3342 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Tmem40Q4FJU9 Mcoln2-201ENSMUST00000011152 2520 ntAPPRIS P4 TSL 1 (best) BASIC11.73□□□□□ -0.53
Tmem40Q4FJU9 Gm12786-201ENSMUST00000129617 644 ntTSL 3 BASIC11.73□□□□□ -0.53
Tmem40Q4FJU9 4930456L15Rik-201ENSMUST00000145577 1185 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Tmem40Q4FJU9 Zc3hc1-210ENSMUST00000152391 1673 ntTSL 5 BASIC11.73□□□□□ -0.53
Tmem40Q4FJU9 Hlcs-202ENSMUST00000163193 5371 ntAPPRIS P2 TSL 1 (best) BASIC11.73□□□□□ -0.53
Tmem40Q4FJU9 Dhrs2-202ENSMUST00000165432 849 ntAPPRIS P1 TSL 5 BASIC11.73□□□□□ -0.53
Tmem40Q4FJU9 Rhobtb1-210ENSMUST00000167384 2331 ntTSL 5 BASIC11.73□□□□□ -0.53
Tmem40Q4FJU9 Syce3-202ENSMUST00000167959 480 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Tmem40Q4FJU9 Gm8584-201ENSMUST00000171982 758 ntBASIC11.73□□□□□ -0.53
Retrieved 100 of 76,532 protein–RNA pairs in 50.7 ms