Protein–RNA interactions for Protein: Q3UAW9

Brf2, Transcription factor IIIB 50 kDa subunit, mousemouse

Predictions only

Length 420 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Brf2Q3UAW9 Lcn5-201ENSMUST00000028306 696 ntAPPRIS P4 TSL 1 (best) BASIC12.94□□□□□ -0.34
Brf2Q3UAW9 Yeats2-201ENSMUST00000090052 5997 ntAPPRIS P3 TSL 1 (best) BASIC12.94□□□□□ -0.34
Brf2Q3UAW9 Pja1-203ENSMUST00000113792 3038 ntAPPRIS P4 TSL 5 BASIC12.94□□□□□ -0.34
Brf2Q3UAW9 Erg-206ENSMUST00000122199 2007 ntAPPRIS ALT1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Brf2Q3UAW9 Ssc5d-201ENSMUST00000057612 4348 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Brf2Q3UAW9 Pxylp1-203ENSMUST00000119141 2768 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Brf2Q3UAW9 Togaram2-205ENSMUST00000153445 3302 ntAPPRIS P1 TSL 5 BASIC12.94□□□□□ -0.34
Brf2Q3UAW9 Atg16l1-201ENSMUST00000027512 3130 ntAPPRIS P3 TSL 1 (best) BASIC12.94□□□□□ -0.34
Brf2Q3UAW9 Atp6ap1-201ENSMUST00000019231 2189 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Brf2Q3UAW9 Srebf2-201ENSMUST00000023100 4989 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Brf2Q3UAW9 Rgs12-202ENSMUST00000087684 4713 ntAPPRIS ALT2 TSL 5 BASIC12.94□□□□□ -0.34
Brf2Q3UAW9 Ankrd50-201ENSMUST00000094300 1944 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Brf2Q3UAW9 Kif3a-208ENSMUST00000173744 2257 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Brf2Q3UAW9 Prkx-202ENSMUST00000114044 2639 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Brf2Q3UAW9 Cpeb3-204ENSMUST00000126188 4224 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Brf2Q3UAW9 Abhd3-202ENSMUST00000117726 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Brf2Q3UAW9 Dnm1-214ENSMUST00000201433 3146 ntAPPRIS ALT1 TSL 5 BASIC12.93□□□□□ -0.34
Brf2Q3UAW9 Prrc2b-201ENSMUST00000036691 8612 ntAPPRIS P3 TSL 1 (best) BASIC12.93□□□□□ -0.34
Brf2Q3UAW9 Gpsm1-204ENSMUST00000114134 2043 ntTSL 3 BASIC12.93□□□□□ -0.34
Brf2Q3UAW9 Gars-201ENSMUST00000003572 2380 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Brf2Q3UAW9 Rnf25-202ENSMUST00000113721 1451 ntAPPRIS ALT1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Brf2Q3UAW9 Plekha1-202ENSMUST00000075181 2301 ntAPPRIS P2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Brf2Q3UAW9 Fgfr1-201ENSMUST00000084027 5025 ntAPPRIS P3 TSL 5 BASIC12.93□□□□□ -0.34
Brf2Q3UAW9 Trappc6a-202ENSMUST00000108455 651 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Brf2Q3UAW9 H60b-202ENSMUST00000131558 1080 ntAPPRIS P1 TSL 5 BASIC12.93□□□□□ -0.34
Brf2Q3UAW9 Gnb2-215ENSMUST00000170293 993 ntTSL 5 BASIC12.93□□□□□ -0.34
Brf2Q3UAW9 Ly6f-202ENSMUST00000189654 818 ntAPPRIS P1 TSL 2 BASIC12.93□□□□□ -0.34
Brf2Q3UAW9 Cela1-201ENSMUST00000023775 1103 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Brf2Q3UAW9 Mrpl4-201ENSMUST00000003386 1288 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Brf2Q3UAW9 Tex12-201ENSMUST00000034568 895 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Brf2Q3UAW9 Snrnp25-201ENSMUST00000039601 821 ntAPPRIS P2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Brf2Q3UAW9 Gm13387-202ENSMUST00000131147 2646 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Brf2Q3UAW9 Gpr45-203ENSMUST00000179766 3776 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Brf2Q3UAW9 Gcsh-201ENSMUST00000040484 1443 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Brf2Q3UAW9 Top1mt-201ENSMUST00000000958 1903 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Brf2Q3UAW9 Gata4-201ENSMUST00000067417 3400 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Brf2Q3UAW9 1700037C18Rik-202ENSMUST00000115859 2592 ntAPPRIS P2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Brf2Q3UAW9 Gm18244-201ENSMUST00000219747 1566 ntBASIC12.93□□□□□ -0.34
Brf2Q3UAW9 Nek7-201ENSMUST00000027642 3737 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Brf2Q3UAW9 Pik3cd-205ENSMUST00000118704 4894 ntAPPRIS ALT1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Brf2Q3UAW9 Mff-201ENSMUST00000073025 1706 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Brf2Q3UAW9 Bdp1-201ENSMUST00000038104 9921 ntAPPRIS P2 TSL 5 BASIC12.93□□□□□ -0.34
Brf2Q3UAW9 Zc3h7b-201ENSMUST00000109554 5958 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Brf2Q3UAW9 Adamts7-207ENSMUST00000147250 4833 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Brf2Q3UAW9 2810402E24Rik-201ENSMUST00000190699 3040 ntBASIC12.93□□□□□ -0.34
Brf2Q3UAW9 Gm14379-201ENSMUST00000128858 1878 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Brf2Q3UAW9 Wdr54-205ENSMUST00000153148 4634 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Brf2Q3UAW9 Srrm1-203ENSMUST00000105861 3797 ntAPPRIS ALT2 TSL 5 BASIC12.93□□□□□ -0.34
Brf2Q3UAW9 Gm8334-201ENSMUST00000112755 1662 ntAPPRIS P1 TSL 5 BASIC12.93□□□□□ -0.34
Brf2Q3UAW9 Evx1os-201ENSMUST00000125305 2916 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Brf2Q3UAW9 Ptp4a2-207ENSMUST00000165853 3382 ntAPPRIS P1 TSL 5 BASIC12.92□□□□□ -0.34
Brf2Q3UAW9 Grk4-201ENSMUST00000001112 2408 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Brf2Q3UAW9 Rfc3-201ENSMUST00000038131 1317 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Brf2Q3UAW9 Cpne4-201ENSMUST00000057742 3959 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Brf2Q3UAW9 Kansl2-ps-201ENSMUST00000181818 1461 ntBASIC12.92□□□□□ -0.34
Brf2Q3UAW9 Ints7-201ENSMUST00000045450 5347 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Brf2Q3UAW9 Zfp109-201ENSMUST00000037448 1935 ntAPPRIS P2 TSL 5 BASIC12.92□□□□□ -0.34
Brf2Q3UAW9 Lrrc8d-201ENSMUST00000060531 3923 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Brf2Q3UAW9 Ace3-201ENSMUST00000190995 2214 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Brf2Q3UAW9 Mpp4-210ENSMUST00000191200 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Brf2Q3UAW9 Gm2420-202ENSMUST00000202224 2249 ntBASIC12.92□□□□□ -0.34
Brf2Q3UAW9 Jazf1-201ENSMUST00000074541 2203 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Brf2Q3UAW9 Esrrb-202ENSMUST00000110203 2363 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Brf2Q3UAW9 Pla2g2e-203ENSMUST00000105804 786 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Brf2Q3UAW9 Gm11557-201ENSMUST00000120200 1008 ntBASIC12.92□□□□□ -0.34
Brf2Q3UAW9 Gm13385-201ENSMUST00000121089 220 ntBASIC12.92□□□□□ -0.34
Brf2Q3UAW9 Zfp57-211ENSMUST00000174524 1747 ntAPPRIS P3 TSL 1 (best) BASIC12.92□□□□□ -0.34
Brf2Q3UAW9 Gm8927-201ENSMUST00000181978 981 ntBASIC12.92□□□□□ -0.34
Brf2Q3UAW9 Gm10766-202ENSMUST00000194123 606 ntBASIC12.92□□□□□ -0.34
Brf2Q3UAW9 4930502C17Rik-201ENSMUST00000200282 948 ntBASIC12.92□□□□□ -0.34
Brf2Q3UAW9 Gm42196-201ENSMUST00000209618 730 ntTSL 5 BASIC12.92□□□□□ -0.34
Brf2Q3UAW9 Tssc1-207ENSMUST00000222407 489 ntTSL 3 BASIC12.92□□□□□ -0.34
Brf2Q3UAW9 Pla2g2e-201ENSMUST00000030531 854 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Brf2Q3UAW9 Gstp2-201ENSMUST00000042700 770 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Brf2Q3UAW9 Cxcr5-201ENSMUST00000062215 2614 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Brf2Q3UAW9 Gm3222-201ENSMUST00000071282 990 ntBASIC12.92□□□□□ -0.34
Brf2Q3UAW9 Fam57b-202ENSMUST00000098032 1894 ntTSL 5 BASIC12.92□□□□□ -0.34
Brf2Q3UAW9 Sema3d-201ENSMUST00000030868 6307 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Brf2Q3UAW9 Nr2c2-201ENSMUST00000113460 7647 ntAPPRIS P3 TSL 1 (best) BASIC12.92□□□□□ -0.34
Brf2Q3UAW9 Bmp3-202ENSMUST00000197143 2739 ntTSL 2 BASIC12.92□□□□□ -0.34
Brf2Q3UAW9 Scfd2-203ENSMUST00000113542 2279 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Brf2Q3UAW9 Zmynd15-202ENSMUST00000092958 2100 ntAPPRIS ALT2 TSL 5 BASIC12.92□□□□□ -0.34
Brf2Q3UAW9 Tfe3-201ENSMUST00000077680 3277 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Brf2Q3UAW9 Eya4-206ENSMUST00000219315 3100 ntAPPRIS ALT2 TSL 5 BASIC12.92□□□□□ -0.34
Brf2Q3UAW9 Uqcrq-201ENSMUST00000061326 1521 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Brf2Q3UAW9 Cggbp1-201ENSMUST00000067744 4425 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Brf2Q3UAW9 Rgp1-202ENSMUST00000107886 5888 ntAPPRIS P1 TSL 5 BASIC12.92□□□□□ -0.34
Brf2Q3UAW9 Gm10729-202ENSMUST00000193403 1375 ntBASIC12.92□□□□□ -0.34
Brf2Q3UAW9 Ranbp3-201ENSMUST00000002445 2511 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Brf2Q3UAW9 Slc39a3-201ENSMUST00000059551 3680 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Brf2Q3UAW9 Litaf-201ENSMUST00000023143 2235 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Brf2Q3UAW9 Crybg1-202ENSMUST00000200401 7525 ntAPPRIS ALT2 TSL 5 BASIC12.92□□□□□ -0.34
Brf2Q3UAW9 Clcn3-204ENSMUST00000110301 4099 ntAPPRIS ALT1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Brf2Q3UAW9 Entpd2-201ENSMUST00000028328 1935 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Brf2Q3UAW9 Vwa3b-202ENSMUST00000067178 1769 ntAPPRIS P5 TSL 2 BASIC12.92□□□□□ -0.34
Brf2Q3UAW9 Lrrc8a-202ENSMUST00000113654 4194 ntAPPRIS P1 TSL 5 BASIC12.91□□□□□ -0.34
Brf2Q3UAW9 Sirt3-210ENSMUST00000211179 1606 ntAPPRIS ALT2 TSL 5 BASIC12.91□□□□□ -0.34
Brf2Q3UAW9 Gtf2a1l-201ENSMUST00000024970 1621 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Brf2Q3UAW9 Cpeb4-201ENSMUST00000020543 2312 ntAPPRIS P2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Brf2Q3UAW9 Dclk1-211ENSMUST00000199169 1499 ntTSL 2 BASIC12.91□□□□□ -0.34
Retrieved 100 of 76,532 protein–RNA pairs in 42.4 ms