Protein–RNA interactions for Protein: Q3TL54

Trim43a, Tripartite motif-containing protein 43A, mousemouse

Predictions only

Length 445 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim43aQ3TL54 Dpm3-202ENSMUST00000107462 827 ntAPPRIS P1 TSL 3 BASIC14.57□□□□□ -0.08
Trim43aQ3TL54 Gm2810-201ENSMUST00000118681 990 ntBASIC14.57□□□□□ -0.08
Trim43aQ3TL54 Gm13823-201ENSMUST00000119930 345 ntBASIC14.57□□□□□ -0.08
Trim43aQ3TL54 Bnipl-204ENSMUST00000137250 1251 ntTSL 5 BASIC14.57□□□□□ -0.08
Trim43aQ3TL54 Gm13431-203ENSMUST00000147012 388 ntTSL 2 BASIC14.57□□□□□ -0.08
Trim43aQ3TL54 Klrg2-202ENSMUST00000201345 1225 ntAPPRIS ALT2 TSL 5 BASIC14.57□□□□□ -0.08
Trim43aQ3TL54 Gm44081-201ENSMUST00000204406 643 ntTSL 3 BASIC14.57□□□□□ -0.08
Trim43aQ3TL54 Stard3nl-209ENSMUST00000221380 1268 ntTSL 5 BASIC14.57□□□□□ -0.08
Trim43aQ3TL54 Oxt-201ENSMUST00000028764 537 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Trim43aQ3TL54 Lce1f-201ENSMUST00000047153 728 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Trim43aQ3TL54 Gpr146-202ENSMUST00000053120 1040 ntBASIC14.57□□□□□ -0.08
Trim43aQ3TL54 Atad3aos-201ENSMUST00000067628 971 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Trim43aQ3TL54 1600017P15Rik-201ENSMUST00000083427 412 ntBASIC14.57□□□□□ -0.08
Trim43aQ3TL54 Notch1-201ENSMUST00000028288 9488 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Trim43aQ3TL54 Rab15-201ENSMUST00000021459 3158 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Trim43aQ3TL54 Foxs1-201ENSMUST00000099200 1311 ntAPPRIS P1 BASIC14.57□□□□□ -0.08
Trim43aQ3TL54 Casc4-202ENSMUST00000089912 3602 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Trim43aQ3TL54 Spin1-201ENSMUST00000095797 4434 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Trim43aQ3TL54 Pus7-201ENSMUST00000119946 3407 ntAPPRIS P3 TSL 1 (best) BASIC14.57□□□□□ -0.08
Trim43aQ3TL54 Gnb5-202ENSMUST00000213990 1803 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Trim43aQ3TL54 Nrxn1-201ENSMUST00000054059 4697 ntTSL 5 BASIC14.57□□□□□ -0.08
Trim43aQ3TL54 Rps6ka4-202ENSMUST00000170516 3105 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Trim43aQ3TL54 Rps6ka4-201ENSMUST00000025903 3105 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Trim43aQ3TL54 Sbds-201ENSMUST00000026387 1548 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Trim43aQ3TL54 B3gat1-204ENSMUST00000160899 3801 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Trim43aQ3TL54 Slc12a8-202ENSMUST00000117134 2081 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Trim43aQ3TL54 Ankrd13c-201ENSMUST00000040787 3903 ntAPPRIS P1 TSL 5 BASIC14.56□□□□□ -0.08
Trim43aQ3TL54 Dao-203ENSMUST00000161610 1633 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Trim43aQ3TL54 Fam160a2-204ENSMUST00000122327 3521 ntAPPRIS P3 TSL 1 (best) BASIC14.56□□□□□ -0.08
Trim43aQ3TL54 Efhc1-201ENSMUST00000038447 2146 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Trim43aQ3TL54 Grb10-201ENSMUST00000093321 5061 ntAPPRIS P3 TSL 1 (best) BASIC14.56□□□□□ -0.08
Trim43aQ3TL54 Cux2-210ENSMUST00000168288 4697 ntAPPRIS P1 TSL 5 BASIC14.56□□□□□ -0.08
Trim43aQ3TL54 Txn2-203ENSMUST00000109747 1778 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Trim43aQ3TL54 Vwa3b-202ENSMUST00000067178 1769 ntAPPRIS P5 TSL 2 BASIC14.56□□□□□ -0.08
Trim43aQ3TL54 Igf2-203ENSMUST00000105935 650 ntAPPRIS P1 TSL 3 BASIC14.56□□□□□ -0.08
Trim43aQ3TL54 Cep250-203ENSMUST00000109618 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Trim43aQ3TL54 Gm11508-201ENSMUST00000129337 440 ntTSL 2 BASIC14.56□□□□□ -0.08
Trim43aQ3TL54 Pcp2-203ENSMUST00000133459 470 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Trim43aQ3TL54 2210408F21Rik-214ENSMUST00000155345 1022 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Trim43aQ3TL54 Rhox2a-202ENSMUST00000173650 735 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Trim43aQ3TL54 Rhox2c-204ENSMUST00000184688 720 ntTSL 5 BASIC14.56□□□□□ -0.08
Trim43aQ3TL54 4930573H18Rik-201ENSMUST00000197696 906 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Trim43aQ3TL54 Gm44662-201ENSMUST00000206970 412 ntTSL 5 BASIC14.56□□□□□ -0.08
Trim43aQ3TL54 Elof1-203ENSMUST00000213233 810 ntAPPRIS P1 TSL 3 BASIC14.56□□□□□ -0.08
Trim43aQ3TL54 Pcp2-201ENSMUST00000004749 495 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Trim43aQ3TL54 Mrgprh-201ENSMUST00000075296 1809 ntAPPRIS P1 BASIC14.56□□□□□ -0.08
Trim43aQ3TL54 Egr3-204ENSMUST00000225200 3940 ntAPPRIS P2 BASIC14.56□□□□□ -0.08
Trim43aQ3TL54 Gm8775-201ENSMUST00000170943 1327 ntBASIC14.56□□□□□ -0.08
Trim43aQ3TL54 Pcbp3-203ENSMUST00000105411 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Trim43aQ3TL54 Slc25a25-203ENSMUST00000113307 2541 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Trim43aQ3TL54 Gm10433-202ENSMUST00000146364 1984 ntTSL 2 BASIC14.56□□□□□ -0.08
Trim43aQ3TL54 Rbmx-203ENSMUST00000114730 2019 ntAPPRIS P1 TSL 5 BASIC14.56□□□□□ -0.08
Trim43aQ3TL54 Rcsd1-201ENSMUST00000040357 2622 ntAPPRIS P4 TSL 1 (best) BASIC14.56□□□□□ -0.08
Trim43aQ3TL54 Rlbp1-201ENSMUST00000053718 2134 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Trim43aQ3TL54 Grm6-201ENSMUST00000000631 4291 ntAPPRIS P1 TSL 5 BASIC14.55□□□□□ -0.08
Trim43aQ3TL54 Myc-205ENSMUST00000161976 2338 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Trim43aQ3TL54 Myc-201ENSMUST00000022971 2338 ntAPPRIS ALT1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Trim43aQ3TL54 Gm45277-201ENSMUST00000210549 1695 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Trim43aQ3TL54 Gspt1-205ENSMUST00000167571 3716 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
Trim43aQ3TL54 Fam126b-201ENSMUST00000038372 2385 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Trim43aQ3TL54 Dcp1b-201ENSMUST00000073909 1748 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
Trim43aQ3TL54 Fam46a-201ENSMUST00000034802 5479 ntAPPRIS P3 TSL 3 BASIC14.55□□□□□ -0.08
Trim43aQ3TL54 Adra1b-201ENSMUST00000067258 3331 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Trim43aQ3TL54 Hdac7-202ENSMUST00000088402 4223 ntAPPRIS P3 TSL 1 (best) BASIC14.55□□□□□ -0.08
Trim43aQ3TL54 Umad1-204ENSMUST00000159433 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
Trim43aQ3TL54 Smyd1-203ENSMUST00000114188 2064 ntTSL 5 BASIC14.55□□□□□ -0.08
Trim43aQ3TL54 Fbxo44-202ENSMUST00000105705 1034 ntTSL 2 BASIC14.55□□□□□ -0.08
Trim43aQ3TL54 Gm12017-201ENSMUST00000122453 1003 ntBASIC14.55□□□□□ -0.08
Trim43aQ3TL54 Tex30-206ENSMUST00000133677 935 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Trim43aQ3TL54 Gm17251-201ENSMUST00000170103 925 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Trim43aQ3TL54 Tcf4-258ENSMUST00000202937 2103 ntTSL 5 BASIC14.55□□□□□ -0.08
Trim43aQ3TL54 Gm18027-201ENSMUST00000218947 619 ntBASIC14.55□□□□□ -0.08
Trim43aQ3TL54 Gm5628-201ENSMUST00000222318 1049 ntBASIC14.55□□□□□ -0.08
Trim43aQ3TL54 AC149294.4-201ENSMUST00000227870 882 ntBASIC14.55□□□□□ -0.08
Trim43aQ3TL54 Il31-201ENSMUST00000031389 806 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Trim43aQ3TL54 Sbsn-201ENSMUST00000080518 2221 ntAPPRIS P3 TSL 1 (best) BASIC14.55□□□□□ -0.08
Trim43aQ3TL54 Astl-202ENSMUST00000089673 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
Trim43aQ3TL54 Taf6-201ENSMUST00000048698 2304 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Trim43aQ3TL54 Pdlim3-203ENSMUST00000210422 1479 ntAPPRIS ALT1 TSL 5 BASIC14.55□□□□□ -0.08
Trim43aQ3TL54 Pex12-207ENSMUST00000176518 2501 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Trim43aQ3TL54 Ptn-202ENSMUST00000201321 2558 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Trim43aQ3TL54 AC159196.2-201ENSMUST00000224082 1622 ntBASIC14.55□□□□□ -0.08
Trim43aQ3TL54 Bcat1-202ENSMUST00000048252 1642 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Trim43aQ3TL54 Gm5939-201ENSMUST00000119613 2874 ntBASIC14.55□□□□□ -0.08
Trim43aQ3TL54 5730409E04Rik-202ENSMUST00000164362 2855 ntAPPRIS P1 TSL 3 BASIC14.55□□□□□ -0.08
Trim43aQ3TL54 Atp9b-213ENSMUST00000225980 5150 ntAPPRIS P2 BASIC14.55□□□□□ -0.08
Trim43aQ3TL54 Rinl-201ENSMUST00000059857 2871 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Trim43aQ3TL54 Nepn-201ENSMUST00000067085 1844 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Trim43aQ3TL54 Ebf1-202ENSMUST00000101326 3422 ntAPPRIS ALT1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Trim43aQ3TL54 Dhx30-201ENSMUST00000062368 3806 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Trim43aQ3TL54 Stag1-206ENSMUST00000129269 6186 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Trim43aQ3TL54 Ciz1-203ENSMUST00000113332 2973 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Trim43aQ3TL54 Tnfrsf21-201ENSMUST00000024708 3626 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Trim43aQ3TL54 Hist1h4d-201ENSMUST00000102968 1138 ntAPPRIS P1 BASIC14.54□□□□□ -0.08
Trim43aQ3TL54 Rerg-203ENSMUST00000119610 890 ntTSL 3 BASIC14.54□□□□□ -0.08
Trim43aQ3TL54 Bcl2l2-204ENSMUST00000172844 498 ntTSL 5 BASIC14.54□□□□□ -0.08
Trim43aQ3TL54 Gm30684-201ENSMUST00000205632 600 ntTSL 3 BASIC14.54□□□□□ -0.08
Trim43aQ3TL54 Tmem41b-201ENSMUST00000094097 3840 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Trim43aQ3TL54 Lce3e-201ENSMUST00000098886 607 ntAPPRIS P1 TSL 3 BASIC14.54□□□□□ -0.08
Trim43aQ3TL54 Dpysl5-202ENSMUST00000101442 1309 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Retrieved 100 of 76,532 protein–RNA pairs in 36.2 ms