Protein–RNA interactions for Protein: Q38HM4

Trim63, E3 ubiquitin-protein ligase TRIM63, mousemouse

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim63Q38HM4 Fhad1os2-201ENSMUST00000152351 945 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Trim63Q38HM4 Cxxc4-201ENSMUST00000166288 1290 ntAPPRIS ALT2 TSL 5 BASIC11.27□□□□□ -0.61
Trim63Q38HM4 1700021A07Rik-203ENSMUST00000188024 404 ntTSL 3 BASIC11.27□□□□□ -0.61
Trim63Q38HM4 Gm38186-201ENSMUST00000192574 449 ntTSL 3 BASIC11.27□□□□□ -0.61
Trim63Q38HM4 Treml1-204ENSMUST00000224001 1220 ntAPPRIS P2 BASIC11.27□□□□□ -0.61
Trim63Q38HM4 3110040N11Rik-201ENSMUST00000026092 887 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Trim63Q38HM4 Clcn3-202ENSMUST00000056508 5684 ntAPPRIS P4 TSL 1 (best) BASIC11.27□□□□□ -0.61
Trim63Q38HM4 Clec10a-209ENSMUST00000178945 2332 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Trim63Q38HM4 Rin3-201ENSMUST00000056950 3892 ntAPPRIS P3 TSL 1 (best) BASIC11.27□□□□□ -0.61
Trim63Q38HM4 Atpaf2-201ENSMUST00000108721 1813 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Trim63Q38HM4 Rit2-203ENSMUST00000153060 1806 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Trim63Q38HM4 Grm7-202ENSMUST00000172951 4197 ntAPPRIS P3 TSL 1 (best) BASIC11.27□□□□□ -0.61
Trim63Q38HM4 Dcaf13-201ENSMUST00000022909 1551 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Trim63Q38HM4 Dnmt3a-218ENSMUST00000174817 8737 ntAPPRIS ALT2 TSL 1 (best) BASIC11.27□□□□□ -0.61
Trim63Q38HM4 Aifm2-202ENSMUST00000080099 1329 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Trim63Q38HM4 Stx1b-201ENSMUST00000106267 4536 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Trim63Q38HM4 Cep350-204ENSMUST00000138762 13307 ntAPPRIS P1 TSL 5 BASIC11.27□□□□□ -0.61
Trim63Q38HM4 Sigirr-206ENSMUST00000210167 1897 ntAPPRIS ALT2 TSL 1 (best) BASIC11.27□□□□□ -0.61
Trim63Q38HM4 Asic3-201ENSMUST00000049346 1853 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Trim63Q38HM4 Hnrnpk-202ENSMUST00000116403 2970 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Trim63Q38HM4 5830411N06Rik-202ENSMUST00000093984 2991 ntAPPRIS ALT2 TSL 1 (best) BASIC11.27□□□□□ -0.61
Trim63Q38HM4 Pex16-201ENSMUST00000028650 1392 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Trim63Q38HM4 Hr-205ENSMUST00000163060 5278 ntAPPRIS ALT2 TSL 5 BASIC11.27□□□□□ -0.61
Trim63Q38HM4 B020017C02Rik-201ENSMUST00000197444 1688 ntBASIC11.27□□□□□ -0.61
Trim63Q38HM4 Il33-202ENSMUST00000120388 2537 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Trim63Q38HM4 Gm14221-202ENSMUST00000209603 1437 ntTSL 5 BASIC11.26□□□□□ -0.61
Trim63Q38HM4 Lhcgr-201ENSMUST00000024916 2553 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Trim63Q38HM4 Magel2-201ENSMUST00000080403 4631 ntAPPRIS P1 BASIC11.26□□□□□ -0.61
Trim63Q38HM4 Gnao1-203ENSMUST00000125716 3462 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Trim63Q38HM4 Dnmt3a-205ENSMUST00000172689 2328 ntAPPRIS P3 TSL 1 (best) BASIC11.26□□□□□ -0.61
Trim63Q38HM4 Prkar1b-203ENSMUST00000110890 2626 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Trim63Q38HM4 Tjap1-203ENSMUST00000180283 2368 ntAPPRIS P2 TSL 5 BASIC11.26□□□□□ -0.61
Trim63Q38HM4 Aak1-201ENSMUST00000003710 7203 ntAPPRIS P3 TSL 5 BASIC11.26□□□□□ -0.61
Trim63Q38HM4 Ptdss2-201ENSMUST00000026568 3624 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Trim63Q38HM4 S1pr1-201ENSMUST00000055676 3046 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Trim63Q38HM4 Pabpc4-202ENSMUST00000080178 3019 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Trim63Q38HM4 Asl-203ENSMUST00000160129 2413 ntAPPRIS P1 TSL 5 BASIC11.26□□□□□ -0.61
Trim63Q38HM4 Tfdp2-205ENSMUST00000179416 2408 ntAPPRIS P3 TSL 1 (best) BASIC11.26□□□□□ -0.61
Trim63Q38HM4 Clvs2-204ENSMUST00000161692 4283 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Trim63Q38HM4 Myo9b-202ENSMUST00000168839 7102 ntAPPRIS ALT2 TSL 5 BASIC11.26□□□□□ -0.61
Trim63Q38HM4 Rph3al-204ENSMUST00000121287 2199 ntAPPRIS P1 TSL 5 BASIC11.26□□□□□ -0.61
Trim63Q38HM4 Zfand2a-202ENSMUST00000110851 3121 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Trim63Q38HM4 Gm14042-201ENSMUST00000120139 833 ntBASIC11.26□□□□□ -0.61
Trim63Q38HM4 Gm16764-202ENSMUST00000148931 433 ntTSL 5 BASIC11.26□□□□□ -0.61
Trim63Q38HM4 Sytl3-204ENSMUST00000159880 1296 ntTSL 5 BASIC11.26□□□□□ -0.61
Trim63Q38HM4 Slc25a41-202ENSMUST00000169012 1172 ntAPPRIS ALT2 TSL 1 (best) BASIC11.26□□□□□ -0.61
Trim63Q38HM4 H2afz-207ENSMUST00000174561 810 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Trim63Q38HM4 Gm8318-201ENSMUST00000182954 872 ntBASIC11.26□□□□□ -0.61
Trim63Q38HM4 Pdcd2-201ENSMUST00000054450 1120 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Trim63Q38HM4 AI467606-201ENSMUST00000056288 1932 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Trim63Q38HM4 Psmd4-202ENSMUST00000107237 1332 ntAPPRIS P3 TSL 1 (best) BASIC11.26□□□□□ -0.61
Trim63Q38HM4 Dlk2-202ENSMUST00000166280 1341 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Trim63Q38HM4 Prkd1-201ENSMUST00000002765 3653 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Trim63Q38HM4 Gm43622-201ENSMUST00000200140 2019 ntBASIC11.26□□□□□ -0.61
Trim63Q38HM4 Agrn-203ENSMUST00000105575 7262 ntTSL 5 BASIC11.26□□□□□ -0.61
Trim63Q38HM4 Atic-201ENSMUST00000027384 2845 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Trim63Q38HM4 Incenp-201ENSMUST00000025562 3217 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Trim63Q38HM4 Rbm6-201ENSMUST00000035201 3999 ntAPPRIS P3 TSL 1 (best) BASIC11.26□□□□□ -0.61
Trim63Q38HM4 Trappc5-202ENSMUST00000207787 4411 ntAPPRIS P1 BASIC11.25□□□□□ -0.61
Trim63Q38HM4 Sem1-201ENSMUST00000041111 1472 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Trim63Q38HM4 Rnf121-202ENSMUST00000096639 2249 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Trim63Q38HM4 Mfap3l-203ENSMUST00000161421 4142 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Trim63Q38HM4 Tpk1-201ENSMUST00000067888 2671 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Trim63Q38HM4 Tpd52-203ENSMUST00000091355 3081 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Trim63Q38HM4 Agpat1-202ENSMUST00000114140 1941 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Trim63Q38HM4 Ecm1-202ENSMUST00000117507 1900 ntAPPRIS P3 TSL 1 (best) BASIC11.25□□□□□ -0.61
Trim63Q38HM4 Hexim2-201ENSMUST00000062530 1910 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Trim63Q38HM4 Gm5859-201ENSMUST00000165401 2324 ntBASIC11.25□□□□□ -0.61
Trim63Q38HM4 Camk1d-201ENSMUST00000044009 6962 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Trim63Q38HM4 Pcdha6-201ENSMUST00000193389 4653 ntAPPRIS ALT2 TSL 1 (best) BASIC11.25□□□□□ -0.61
Trim63Q38HM4 AC124577.2-201ENSMUST00000217413 2420 ntBASIC11.25□□□□□ -0.61
Trim63Q38HM4 Ank1-204ENSMUST00000117270 5652 ntAPPRIS ALT2 TSL 5 BASIC11.25□□□□□ -0.61
Trim63Q38HM4 Gpat3-201ENSMUST00000031255 2884 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Trim63Q38HM4 Mks1-201ENSMUST00000038196 2499 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Trim63Q38HM4 Asb3-202ENSMUST00000117883 2509 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Trim63Q38HM4 Gm26588-202ENSMUST00000181355 2538 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Trim63Q38HM4 Tbl1xr1-211ENSMUST00000202747 4209 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Trim63Q38HM4 Speg-203ENSMUST00000113588 1078 ntTSL 5 BASIC11.25□□□□□ -0.61
Trim63Q38HM4 Fam98c-203ENSMUST00000134176 1189 ntTSL 2 BASIC11.25□□□□□ -0.61
Trim63Q38HM4 Cenps-207ENSMUST00000177408 689 ntTSL 2 BASIC11.25□□□□□ -0.61
Trim63Q38HM4 Tomm20-202ENSMUST00000212771 458 ntTSL 2 BASIC11.25□□□□□ -0.61
Trim63Q38HM4 AC122351.1-201ENSMUST00000220467 126 ntBASIC11.25□□□□□ -0.61
Trim63Q38HM4 Snrnp35-201ENSMUST00000031349 1115 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Trim63Q38HM4 Gm10638-201ENSMUST00000098532 905 ntAPPRIS P1 BASIC11.25□□□□□ -0.61
Trim63Q38HM4 Igsf3-201ENSMUST00000043983 7371 ntAPPRIS P2 TSL 1 (best) BASIC11.25□□□□□ -0.61
Trim63Q38HM4 Sorcs1-206ENSMUST00000209783 3489 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Trim63Q38HM4 Capn3-201ENSMUST00000028748 2606 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Trim63Q38HM4 Nfe2l1-210ENSMUST00000167110 3547 ntAPPRIS ALT2 TSL 2 BASIC11.25□□□□□ -0.61
Trim63Q38HM4 Drd1-201ENSMUST00000021932 3526 ntAPPRIS P2 TSL 1 (best) BASIC11.25□□□□□ -0.61
Trim63Q38HM4 Akap12-201ENSMUST00000045730 6195 ntAPPRIS P2 TSL 1 (best) BASIC11.25□□□□□ -0.61
Trim63Q38HM4 A930024N18Rik-201ENSMUST00000181251 3955 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Trim63Q38HM4 D6Ertd527e-203ENSMUST00000203747 2216 ntAPPRIS ALT2 TSL 5 BASIC11.25□□□□□ -0.61
Trim63Q38HM4 Samd11-204ENSMUST00000218788 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC11.25□□□□□ -0.61
Trim63Q38HM4 Ap4e1-203ENSMUST00000110394 2271 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Trim63Q38HM4 Gm10097-201ENSMUST00000180100 2784 ntAPPRIS P1 BASIC11.25□□□□□ -0.61
Trim63Q38HM4 Sec23b-201ENSMUST00000028916 2779 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Trim63Q38HM4 Rbm39-203ENSMUST00000109587 2810 ntAPPRIS P3 TSL 1 (best) BASIC11.25□□□□□ -0.61
Trim63Q38HM4 Oprm1-215ENSMUST00000105607 2369 ntAPPRIS P2 TSL 1 (best) BASIC11.25□□□□□ -0.61
Trim63Q38HM4 AC166574.4-201ENSMUST00000227165 1937 ntBASIC11.25□□□□□ -0.61
Trim63Q38HM4 Rcan2-202ENSMUST00000044895 3363 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Retrieved 100 of 76,532 protein–RNA pairs in 54.9 ms