Protein–RNA interactions for Protein: Q08423

Tff1, Trefoil factor 1, mousemouse

Predictions only

Length 87 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tff1Q08423 Arap1-204ENSMUST00000107010 5147 ntAPPRIS P2 TSL 1 (best) BASIC11.43□□□□□ -0.58
Tff1Q08423 Zyx-202ENSMUST00000164375 3188 ntAPPRIS P3 TSL 1 (best) BASIC11.43□□□□□ -0.58
Tff1Q08423 Grin1-204ENSMUST00000114310 4276 ntTSL 5 BASIC11.43□□□□□ -0.58
Tff1Q08423 Itpripl1-203ENSMUST00000154021 1753 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Tff1Q08423 Zfp740-201ENSMUST00000118729 4241 ntAPPRIS ALT2 TSL 1 (best) BASIC11.43□□□□□ -0.58
Tff1Q08423 Prrx1-204ENSMUST00000174397 6527 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Tff1Q08423 Ncor2-206ENSMUST00000111402 8862 ntAPPRIS ALT2 TSL 5 BASIC11.43□□□□□ -0.58
Tff1Q08423 Dok7-203ENSMUST00000114270 2779 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Tff1Q08423 Pcnx2-204ENSMUST00000131127 3782 ntTSL 5 BASIC11.43□□□□□ -0.58
Tff1Q08423 Pcp2-202ENSMUST00000128566 1447 ntAPPRIS ALT2 TSL 2 BASIC11.43□□□□□ -0.58
Tff1Q08423 D430019H16Rik-201ENSMUST00000178224 5786 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Tff1Q08423 Zfp169-203ENSMUST00000176176 2162 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Tff1Q08423 Kyat1-205ENSMUST00000113662 1850 ntAPPRIS P1 TSL 5 BASIC11.42□□□□□ -0.58
Tff1Q08423 1600002D24Rik-202ENSMUST00000136744 1854 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Tff1Q08423 Dnaaf2-201ENSMUST00000021356 3390 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Tff1Q08423 Clcn3-204ENSMUST00000110301 4099 ntAPPRIS ALT1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Tff1Q08423 Ppip5k2-202ENSMUST00000112845 6239 ntAPPRIS ALT2 TSL 5 BASIC11.42□□□□□ -0.58
Tff1Q08423 Tnk2-201ENSMUST00000115120 2794 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Tff1Q08423 Fam20a-201ENSMUST00000020938 2541 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Tff1Q08423 Tmem269-202ENSMUST00000212054 1504 ntAPPRIS P2 TSL 1 (best) BASIC11.42□□□□□ -0.58
Tff1Q08423 Rubcn-203ENSMUST00000115105 5255 ntAPPRIS ALT2 TSL 5 BASIC11.42□□□□□ -0.58
Tff1Q08423 Ap2m1-201ENSMUST00000007216 2937 ntAPPRIS P3 TSL 5 BASIC11.42□□□□□ -0.58
Tff1Q08423 Gm36995-201ENSMUST00000126170 5727 ntTSL 2 BASIC11.42□□□□□ -0.58
Tff1Q08423 AC126549.2-201ENSMUST00000223997 1976 ntBASIC11.42□□□□□ -0.58
Tff1Q08423 Gldnos-201ENSMUST00000149237 841 ntTSL 2 BASIC11.42□□□□□ -0.58
Tff1Q08423 Gm26771-201ENSMUST00000180472 1082 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Tff1Q08423 H2-Pa-201ENSMUST00000182803 626 ntBASIC11.42□□□□□ -0.58
Tff1Q08423 Lamtor1-202ENSMUST00000193465 661 ntTSL 5 BASIC11.42□□□□□ -0.58
Tff1Q08423 Gm34866-201ENSMUST00000196146 515 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Tff1Q08423 Klrg2-202ENSMUST00000201345 1225 ntAPPRIS ALT2 TSL 5 BASIC11.42□□□□□ -0.58
Tff1Q08423 Tex12-202ENSMUST00000217236 1003 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Tff1Q08423 Med10-204ENSMUST00000221893 815 ntTSL 2 BASIC11.42□□□□□ -0.58
Tff1Q08423 Pak4-201ENSMUST00000032823 2611 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Tff1Q08423 Epb41-203ENSMUST00000084253 5141 ntAPPRIS ALT2 TSL 1 (best) BASIC11.42□□□□□ -0.58
Tff1Q08423 Gm44065-201ENSMUST00000203184 3527 ntBASIC11.42□□□□□ -0.58
Tff1Q08423 Hectd1-201ENSMUST00000042052 8988 ntAPPRIS P1 TSL 5 BASIC11.42□□□□□ -0.58
Tff1Q08423 Rnf40-202ENSMUST00000205694 5279 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Tff1Q08423 Zfp202-201ENSMUST00000026693 3461 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Tff1Q08423 Slc9a3r2-202ENSMUST00000019684 1688 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Tff1Q08423 Hid1-201ENSMUST00000044152 3236 ntAPPRIS ALT1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Tff1Q08423 Dnajb5-204ENSMUST00000107973 2300 ntAPPRIS P2 TSL 1 (best) BASIC11.42□□□□□ -0.58
Tff1Q08423 Pdgfra-205ENSMUST00000201711 4088 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Tff1Q08423 Frmpd4-204ENSMUST00000112149 8456 ntAPPRIS ALT2 TSL 5 BASIC11.42□□□□□ -0.58
Tff1Q08423 Stau2-215ENSMUST00000162435 2735 ntTSL 5 BASIC11.42□□□□□ -0.58
Tff1Q08423 Clpb-202ENSMUST00000106998 2287 ntAPPRIS ALT2 TSL 5 BASIC11.42□□□□□ -0.58
Tff1Q08423 Kif3a-208ENSMUST00000173744 2257 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Tff1Q08423 Ext1-201ENSMUST00000077273 7663 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Tff1Q08423 Atpaf2-201ENSMUST00000108721 1813 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Tff1Q08423 Edrf1-201ENSMUST00000051169 5424 ntAPPRIS P2 TSL 1 (best) BASIC11.42□□□□□ -0.58
Tff1Q08423 Tmem101-201ENSMUST00000021296 1574 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Tff1Q08423 Necab1-201ENSMUST00000041606 4922 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Tff1Q08423 Egfem1-201ENSMUST00000118531 1779 ntAPPRIS ALT2 TSL 1 (best) BASIC11.41□□□□□ -0.58
Tff1Q08423 Mdga1-201ENSMUST00000073556 7566 ntAPPRIS P2 TSL 5 BASIC11.41□□□□□ -0.58
Tff1Q08423 C2cd4c-201ENSMUST00000059699 6729 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Tff1Q08423 Esrrb-202ENSMUST00000110203 2363 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Tff1Q08423 Psmc5-201ENSMUST00000021049 1316 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Tff1Q08423 Celf5-201ENSMUST00000118763 4391 ntAPPRIS P3 TSL 1 (best) BASIC11.41□□□□□ -0.58
Tff1Q08423 Fbn1-201ENSMUST00000028633 9847 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Tff1Q08423 Maged2-204ENSMUST00000112700 2107 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Tff1Q08423 Rnf114-201ENSMUST00000078050 2502 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Tff1Q08423 Gtf3c5-201ENSMUST00000028157 2739 ntAPPRIS P3 TSL 1 (best) BASIC11.41□□□□□ -0.58
Tff1Q08423 Galnt17-201ENSMUST00000086023 8040 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Tff1Q08423 Ces1h-201ENSMUST00000145041 1870 ntAPPRIS P1 TSL 5 BASIC11.41□□□□□ -0.58
Tff1Q08423 Rbfox2-209ENSMUST00000228087 1694 ntAPPRIS ALT2 BASIC11.41□□□□□ -0.58
Tff1Q08423 Sergef-201ENSMUST00000033127 1465 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Tff1Q08423 Chp2-201ENSMUST00000033152 1456 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Tff1Q08423 Hist1h2ae-201ENSMUST00000102969 704 ntAPPRIS P1 BASIC11.41□□□□□ -0.58
Tff1Q08423 Gm3054-201ENSMUST00000111075 265 ntTSL 5 BASIC11.41□□□□□ -0.58
Tff1Q08423 Clnkos-201ENSMUST00000114080 439 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Tff1Q08423 Gm8410-201ENSMUST00000117225 605 ntBASIC11.41□□□□□ -0.58
Tff1Q08423 Hoxa7-202ENSMUST00000134367 807 ntTSL 5 BASIC11.41□□□□□ -0.58
Tff1Q08423 Kansl3-206ENSMUST00000187628 336 ntTSL 5 BASIC11.41□□□□□ -0.58
Tff1Q08423 Lsamp-207ENSMUST00000189229 637 ntTSL 3 BASIC11.41□□□□□ -0.58
Tff1Q08423 Lsamp-210ENSMUST00000191610 1297 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Tff1Q08423 Gtpbp10-211ENSMUST00000198799 648 ntBASIC11.41□□□□□ -0.58
Tff1Q08423 AC121598.1-201ENSMUST00000228224 1019 ntBASIC11.41□□□□□ -0.58
Tff1Q08423 Cks1b-201ENSMUST00000029679 849 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Tff1Q08423 Gm2423-201ENSMUST00000074863 733 ntBASIC11.41□□□□□ -0.58
Tff1Q08423 Hist1h2ah-201ENSMUST00000091742 405 ntAPPRIS P1 BASIC11.41□□□□□ -0.58
Tff1Q08423 Matn3-201ENSMUST00000020899 3014 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Tff1Q08423 Pag1-204ENSMUST00000161949 8256 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Tff1Q08423 Dysf-201ENSMUST00000081904 6660 ntAPPRIS P4 TSL 1 (best) BASIC11.41□□□□□ -0.58
Tff1Q08423 Rab3a-204ENSMUST00000110093 1442 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Tff1Q08423 Kmt5c-203ENSMUST00000108583 2177 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Tff1Q08423 Irak1-206ENSMUST00000114354 3835 ntAPPRIS ALT2 TSL 1 (best) BASIC11.41□□□□□ -0.58
Tff1Q08423 Taf6-201ENSMUST00000048698 2304 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Tff1Q08423 Zscan29-205ENSMUST00000163766 3611 ntAPPRIS ALT2 TSL 5 BASIC11.41□□□□□ -0.58
Tff1Q08423 Cacna1g-207ENSMUST00000107789 8383 ntAPPRIS ALT2 TSL 5 BASIC11.41□□□□□ -0.58
Tff1Q08423 Eif3j1-201ENSMUST00000028668 5413 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Tff1Q08423 Sebox-201ENSMUST00000001130 1351 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Tff1Q08423 Atg16l1-202ENSMUST00000113186 3004 ntAPPRIS ALT1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Tff1Q08423 Jpt1-201ENSMUST00000021083 1375 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Tff1Q08423 Zfp109-201ENSMUST00000037448 1935 ntAPPRIS P2 TSL 5 BASIC11.41□□□□□ -0.58
Tff1Q08423 Hps3-202ENSMUST00000108321 3385 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Tff1Q08423 Dlgap1-202ENSMUST00000097288 2626 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Tff1Q08423 Polrmt-202ENSMUST00000159016 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC11.4□□□□□ -0.58
Tff1Q08423 Samd4-203ENSMUST00000125113 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC11.4□□□□□ -0.58
Tff1Q08423 Bcat2-202ENSMUST00000120864 1536 ntTSL 5 BASIC11.4□□□□□ -0.58
Tff1Q08423 Ckmt1-202ENSMUST00000078222 1518 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Tff1Q08423 Eif5b-201ENSMUST00000027252 7797 ntAPPRIS P1 TSL 2 BASIC11.4□□□□□ -0.58
Retrieved 100 of 76,532 protein–RNA pairs in 85.6 ms