Protein–RNA interactions for Protein: P97334

Nkx2-3, Homeobox protein Nkx-2.3, mousemouse

Predictions only

Length 362 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx2-3P97334 Prg4-207ENSMUST00000162367 1480 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Nkx2-3P97334 Ist1-201ENSMUST00000034164 2304 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Nkx2-3P97334 7420426K07Rik-201ENSMUST00000098460 1504 ntAPPRIS P1 BASIC17.13■□□□□ 0.33
Nkx2-3P97334 Toe1-202ENSMUST00000106455 1209 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Nkx2-3P97334 Fgf8-203ENSMUST00000111924 630 ntTSL 5 BASIC17.13■□□□□ 0.33
Nkx2-3P97334 Gm12167-201ENSMUST00000148132 578 ntTSL 2 BASIC17.13■□□□□ 0.33
Nkx2-3P97334 Gm12349-201ENSMUST00000153030 657 ntTSL 3 BASIC17.13■□□□□ 0.33
Nkx2-3P97334 4930524O07Rik-201ENSMUST00000161822 1050 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Nkx2-3P97334 Pde4b-210ENSMUST00000172616 823 ntTSL 5 BASIC17.13■□□□□ 0.33
Nkx2-3P97334 1700120C14Rik-202ENSMUST00000187967 391 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Nkx2-3P97334 Cts7-204ENSMUST00000225321 1257 ntBASIC17.13■□□□□ 0.33
Nkx2-3P97334 CT009713.10-202ENSMUST00000225734 696 ntBASIC17.13■□□□□ 0.33
Nkx2-3P97334 Tescl-201ENSMUST00000069562 855 ntAPPRIS P1 BASIC17.13■□□□□ 0.33
Nkx2-3P97334 Olfr1209-201ENSMUST00000099809 933 ntAPPRIS P1 BASIC17.13■□□□□ 0.33
Nkx2-3P97334 Egr1-201ENSMUST00000064795 4484 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Nkx2-3P97334 Krt40-201ENSMUST00000074253 1320 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Nkx2-3P97334 Ociad2-201ENSMUST00000087195 2554 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Nkx2-3P97334 Slc4a2-201ENSMUST00000080067 4179 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Nkx2-3P97334 Sgce-201ENSMUST00000004750 1703 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Nkx2-3P97334 Stx6-201ENSMUST00000027743 4589 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Nkx2-3P97334 Fam71f1-203ENSMUST00000164560 1411 ntAPPRIS P4 TSL 1 (best) BASIC17.13■□□□□ 0.33
Nkx2-3P97334 Rnf44-211ENSMUST00000134862 3797 ntTSL 5 BASIC17.12■□□□□ 0.33
Nkx2-3P97334 Kif3a-201ENSMUST00000057330 2290 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Nkx2-3P97334 Zfp747-201ENSMUST00000067425 2684 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Nkx2-3P97334 AC153366.2-201ENSMUST00000219461 1984 ntBASIC17.12■□□□□ 0.33
Nkx2-3P97334 Thoc6-204ENSMUST00000115490 1157 ntTSL 5 BASIC17.12■□□□□ 0.33
Nkx2-3P97334 Cd180-203ENSMUST00000170878 842 ntTSL 3 BASIC17.12■□□□□ 0.33
Nkx2-3P97334 Cd180-205ENSMUST00000172138 518 ntTSL 2 BASIC17.12■□□□□ 0.33
Nkx2-3P97334 A930009A15Rik-201ENSMUST00000173620 1001 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Nkx2-3P97334 Gm7895-201ENSMUST00000187459 1173 ntBASIC17.12■□□□□ 0.33
Nkx2-3P97334 Gm7783-201ENSMUST00000204795 781 ntBASIC17.12■□□□□ 0.33
Nkx2-3P97334 Gm45865-201ENSMUST00000211815 945 ntBASIC17.12■□□□□ 0.33
Nkx2-3P97334 Gm11992-201ENSMUST00000043285 2400 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Nkx2-3P97334 Dstyk-204ENSMUST00000188389 3232 ntTSL 5 BASIC17.12■□□□□ 0.33
Nkx2-3P97334 9130011E15Rik-201ENSMUST00000045396 2896 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
Nkx2-3P97334 Ubfd1-201ENSMUST00000033158 4849 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Nkx2-3P97334 Ube2j2-204ENSMUST00000105582 1394 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Nkx2-3P97334 Mef2d-201ENSMUST00000001455 5401 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Nkx2-3P97334 Hoxd10-201ENSMUST00000061745 1816 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Nkx2-3P97334 AC096628.2-201ENSMUST00000225443 1413 ntBASIC17.12■□□□□ 0.33
Nkx2-3P97334 Trib1-202ENSMUST00000118228 3081 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Nkx2-3P97334 Tnrc6c-202ENSMUST00000106344 8847 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
Nkx2-3P97334 Tekt2-201ENSMUST00000030658 1492 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Nkx2-3P97334 Reep5-201ENSMUST00000006027 2894 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Nkx2-3P97334 Trim62-201ENSMUST00000035667 3752 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Nkx2-3P97334 Slc43a1-203ENSMUST00000111625 2487 ntAPPRIS P4 TSL 1 (best) BASIC17.11■□□□□ 0.33
Nkx2-3P97334 Pde1c-203ENSMUST00000164037 3068 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Nkx2-3P97334 Pgd-201ENSMUST00000084124 2218 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Nkx2-3P97334 Sema4c-201ENSMUST00000114991 3773 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Nkx2-3P97334 Gm12363-201ENSMUST00000122250 668 ntBASIC17.11■□□□□ 0.33
Nkx2-3P97334 E130006D01Rik-203ENSMUST00000137398 906 ntTSL 2 BASIC17.11■□□□□ 0.33
Nkx2-3P97334 Gm8801-201ENSMUST00000173255 1064 ntBASIC17.11■□□□□ 0.33
Nkx2-3P97334 1600014C23Rik-201ENSMUST00000178179 518 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Nkx2-3P97334 Gm43822-201ENSMUST00000200285 476 ntBASIC17.11■□□□□ 0.33
Nkx2-3P97334 Gm44127-201ENSMUST00000203565 291 ntTSL 3 BASIC17.11■□□□□ 0.33
Nkx2-3P97334 Gm31992-201ENSMUST00000213387 862 ntTSL 5 BASIC17.11■□□□□ 0.33
Nkx2-3P97334 Gm8227-201ENSMUST00000223306 571 ntBASIC17.11■□□□□ 0.33
Nkx2-3P97334 Adamts3-204ENSMUST00000198151 1833 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Nkx2-3P97334 Tmem9-201ENSMUST00000063719 1806 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Nkx2-3P97334 Acot3-201ENSMUST00000021653 3431 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
Nkx2-3P97334 Gm6203-201ENSMUST00000209575 1342 ntBASIC17.11■□□□□ 0.33
Nkx2-3P97334 Matn3-201ENSMUST00000020899 3014 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Nkx2-3P97334 Kctd20-203ENSMUST00000118762 3839 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Nkx2-3P97334 Commd1-201ENSMUST00000057843 1459 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Nkx2-3P97334 Pbx3-202ENSMUST00000113132 2734 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Nkx2-3P97334 Maged2-204ENSMUST00000112700 2107 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Nkx2-3P97334 Sf3a2-203ENSMUST00000148665 2213 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Nkx2-3P97334 Wdr5-201ENSMUST00000113952 2890 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Nkx2-3P97334 Gpr4-201ENSMUST00000060225 2882 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Nkx2-3P97334 F3-201ENSMUST00000029771 1872 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Nkx2-3P97334 Gm22323-201ENSMUST00000103832 109 ntBASIC17.1■□□□□ 0.33
Nkx2-3P97334 Tmod4-202ENSMUST00000107227 1260 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
Nkx2-3P97334 Gm4219-201ENSMUST00000168140 2143 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Nkx2-3P97334 Lhx1-201ENSMUST00000018842 3846 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Nkx2-3P97334 Gm37259-201ENSMUST00000193903 849 ntBASIC17.1■□□□□ 0.33
Nkx2-3P97334 Gm38161-201ENSMUST00000195344 576 ntTSL 2 BASIC17.1■□□□□ 0.33
Nkx2-3P97334 Gm4935-201ENSMUST00000221316 1198 ntBASIC17.1■□□□□ 0.33
Nkx2-3P97334 AC134254.1-201ENSMUST00000221362 167 ntBASIC17.1■□□□□ 0.33
Nkx2-3P97334 Nudt22-201ENSMUST00000041686 1000 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Nkx2-3P97334 Sphk2-201ENSMUST00000072836 2968 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Nkx2-3P97334 Sptbn4-203ENSMUST00000108363 4724 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Nkx2-3P97334 Sptbn4-204ENSMUST00000108364 4740 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Nkx2-3P97334 Mark2-201ENSMUST00000025921 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Nkx2-3P97334 Gm43579-201ENSMUST00000202387 1307 ntBASIC17.1■□□□□ 0.33
Nkx2-3P97334 Zap70-201ENSMUST00000027291 2245 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Nkx2-3P97334 Lnx1-205ENSMUST00000117525 2259 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Nkx2-3P97334 Pou5f2-201ENSMUST00000175955 1394 ntAPPRIS P1 BASIC17.1■□□□□ 0.33
Nkx2-3P97334 Dlgap4-201ENSMUST00000000094 1411 ntTSL 5 BASIC17.1■□□□□ 0.33
Nkx2-3P97334 Hnrnpr-204ENSMUST00000131671 2543 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Nkx2-3P97334 Bbs7-203ENSMUST00000108156 2687 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Nkx2-3P97334 Trim32-201ENSMUST00000050850 3194 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Nkx2-3P97334 Tbc1d8-201ENSMUST00000054462 4451 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Nkx2-3P97334 Krt71-201ENSMUST00000023710 2185 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Nkx2-3P97334 Rara-203ENSMUST00000107474 2380 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
Nkx2-3P97334 Ctgf-203ENSMUST00000176228 2490 ntTSL 2 BASIC17.09■□□□□ 0.33
Nkx2-3P97334 Zswim8-201ENSMUST00000022358 6073 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Nkx2-3P97334 Tmem185b-202ENSMUST00000183952 2824 ntAPPRIS P1 BASIC17.09■□□□□ 0.33
Nkx2-3P97334 G3bp2-202ENSMUST00000164378 3026 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
Nkx2-3P97334 Gm16479-201ENSMUST00000121706 932 ntBASIC17.09■□□□□ 0.33
Nkx2-3P97334 Gm13786-201ENSMUST00000122371 333 ntBASIC17.09■□□□□ 0.33
Retrieved 100 of 76,532 protein–RNA pairs in 36.6 ms