Protein–RNA interactions for Protein: P84244

H3f3a, Histone H3.3, mousemouse

Known RBP Predictions only

Length 136 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H3f3aP84244 Csk-209ENSMUST00000217314 2162 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
H3f3aP84244 Klc2-203ENSMUST00000113728 2838 ntTSL 5 BASIC12.22□□□□□ -0.45
H3f3aP84244 Ccdc27-201ENSMUST00000047207 2089 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
H3f3aP84244 Taf3-201ENSMUST00000026888 4792 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
H3f3aP84244 Duxf3-202ENSMUST00000176875 2025 ntAPPRIS P1 BASIC12.22□□□□□ -0.45
H3f3aP84244 Ube3b-201ENSMUST00000074002 5194 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
H3f3aP84244 Spaca3-202ENSMUST00000103223 947 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
H3f3aP84244 Trav3d-3-201ENSMUST00000103599 276 ntAPPRIS P1 BASIC12.22□□□□□ -0.45
H3f3aP84244 Trav3n-3-201ENSMUST00000103625 276 ntAPPRIS P1 BASIC12.22□□□□□ -0.45
H3f3aP84244 Kir3dl1-201ENSMUST00000113104 1031 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
H3f3aP84244 Rpl34-203ENSMUST00000133802 711 ntTSL 2 BASIC12.22□□□□□ -0.45
H3f3aP84244 Hoxd8-203ENSMUST00000151380 557 ntAPPRIS ALT2 TSL 2 BASIC12.22□□□□□ -0.45
H3f3aP84244 Cpsf4l-205ENSMUST00000173655 1213 ntAPPRIS P3 TSL 1 (best) BASIC12.22□□□□□ -0.45
H3f3aP84244 Gm17344-202ENSMUST00000173980 621 ntTSL 5 BASIC12.22□□□□□ -0.45
H3f3aP84244 Trav3-3-202ENSMUST00000183835 276 ntAPPRIS P1 BASIC12.22□□□□□ -0.45
H3f3aP84244 Gm18934-201ENSMUST00000216671 1044 ntBASIC12.22□□□□□ -0.45
H3f3aP84244 Gm6218-201ENSMUST00000219812 628 ntBASIC12.22□□□□□ -0.45
H3f3aP84244 Aip-201ENSMUST00000025767 1261 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
H3f3aP84244 1700020A23Rik-201ENSMUST00000028898 712 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
H3f3aP84244 Pdia4-201ENSMUST00000077290 2399 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
H3f3aP84244 Stk16-201ENSMUST00000027401 2876 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
H3f3aP84244 Gabrg3-202ENSMUST00000068911 9767 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
H3f3aP84244 Prkg1-202ENSMUST00000073581 2841 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
H3f3aP84244 Kctd20-202ENSMUST00000117672 2219 ntTSL 5 BASIC12.22□□□□□ -0.45
H3f3aP84244 Rtfdc1-201ENSMUST00000029005 2173 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
H3f3aP84244 Gm38037-201ENSMUST00000192600 1624 ntBASIC12.22□□□□□ -0.45
H3f3aP84244 Celf4-207ENSMUST00000225477 2626 ntAPPRIS P3 BASIC12.22□□□□□ -0.45
H3f3aP84244 Ncor2-206ENSMUST00000111402 8862 ntAPPRIS ALT2 TSL 5 BASIC12.22□□□□□ -0.45
H3f3aP84244 Mfsd1-201ENSMUST00000029344 3011 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
H3f3aP84244 Ankra2-208ENSMUST00000226100 1476 ntBASIC12.21□□□□□ -0.45
H3f3aP84244 Zfp346-201ENSMUST00000021937 3333 ntAPPRIS P2 TSL 1 (best) BASIC12.21□□□□□ -0.45
H3f3aP84244 Lrrc10-201ENSMUST00000073834 1428 ntAPPRIS P1 BASIC12.21□□□□□ -0.45
H3f3aP84244 Syt6-203ENSMUST00000118117 1856 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
H3f3aP84244 Tm7sf2-203ENSMUST00000159084 1351 ntTSL 5 BASIC12.21□□□□□ -0.45
H3f3aP84244 Mpp4-210ENSMUST00000191200 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.45
H3f3aP84244 Folr1-204ENSMUST00000106985 1313 ntAPPRIS P1 TSL 5 BASIC12.21□□□□□ -0.45
H3f3aP84244 Prss22-201ENSMUST00000041649 1323 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
H3f3aP84244 Urm1-201ENSMUST00000091142 2196 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
H3f3aP84244 Pja1-203ENSMUST00000113792 3038 ntAPPRIS P4 TSL 5 BASIC12.21□□□□□ -0.45
H3f3aP84244 Gm7488-201ENSMUST00000117148 684 ntBASIC12.21□□□□□ -0.45
H3f3aP84244 Lce1j-202ENSMUST00000186525 703 ntAPPRIS P1 TSL 3 BASIC12.21□□□□□ -0.45
H3f3aP84244 Gm29542-201ENSMUST00000186876 704 ntTSL 3 BASIC12.21□□□□□ -0.45
H3f3aP84244 Gm5626-201ENSMUST00000222151 1058 ntBASIC12.21□□□□□ -0.45
H3f3aP84244 Odf3l2-201ENSMUST00000095464 1248 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
H3f3aP84244 Ripor2-201ENSMUST00000038477 3371 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.45
H3f3aP84244 Map7d1-201ENSMUST00000061143 3351 ntAPPRIS P3 TSL 1 (best) BASIC12.21□□□□□ -0.45
H3f3aP84244 AI480526-202ENSMUST00000159637 1697 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
H3f3aP84244 Apbb2-203ENSMUST00000159512 6632 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
H3f3aP84244 Kcnma1-214ENSMUST00000190044 3747 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.45
H3f3aP84244 Reep5-201ENSMUST00000006027 2894 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
H3f3aP84244 Gm16029-201ENSMUST00000161643 2427 ntTSL 1 (best) BASIC12.21□□□□□ -0.46
H3f3aP84244 4632428C04Rik-201ENSMUST00000181485 2430 ntTSL 1 (best) BASIC12.21□□□□□ -0.46
H3f3aP84244 Ncln-202ENSMUST00000118498 2841 ntAPPRIS ALT1 TSL 5 BASIC12.21□□□□□ -0.46
H3f3aP84244 Ssh1-204ENSMUST00000159592 8436 ntAPPRIS P2 TSL 1 (best) BASIC12.21□□□□□ -0.46
H3f3aP84244 Rnf144a-201ENSMUST00000020971 5164 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
H3f3aP84244 Prrxl1-202ENSMUST00000186452 2371 ntAPPRIS P1 TSL 5 BASIC12.21□□□□□ -0.46
H3f3aP84244 Phactr3-203ENSMUST00000108915 2694 ntTSL 1 (best) BASIC12.21□□□□□ -0.46
H3f3aP84244 Phactr3-204ENSMUST00000108916 2656 ntTSL 1 (best) BASIC12.21□□□□□ -0.46
H3f3aP84244 Nt5c2-202ENSMUST00000168536 3769 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
H3f3aP84244 Plch2-208ENSMUST00000145662 1818 ntTSL 1 (best) BASIC12.21□□□□□ -0.46
H3f3aP84244 Osbpl10-204ENSMUST00000182384 2158 ntTSL 5 BASIC12.2□□□□□ -0.46
H3f3aP84244 Six3os1-211ENSMUST00000176958 2889 ntTSL 2 BASIC12.2□□□□□ -0.46
H3f3aP84244 Gad2-201ENSMUST00000028123 5744 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
H3f3aP84244 Gpr137c-201ENSMUST00000146150 3917 ntAPPRIS P2 TSL 5 BASIC12.2□□□□□ -0.46
H3f3aP84244 Itpripl1-203ENSMUST00000154021 1753 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
H3f3aP84244 Gm38391-201ENSMUST00000191720 4069 ntBASIC12.2□□□□□ -0.46
H3f3aP84244 AW209491-202ENSMUST00000178289 2035 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
H3f3aP84244 Adam15-201ENSMUST00000029676 2975 ntAPPRIS P4 TSL 1 (best) BASIC12.2□□□□□ -0.46
H3f3aP84244 Ntrk2-209ENSMUST00000225950 2640 ntBASIC12.2□□□□□ -0.46
H3f3aP84244 Plekhg2-202ENSMUST00000119990 4880 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
H3f3aP84244 Dnase1l1-201ENSMUST00000019232 1625 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
H3f3aP84244 Nr2f2-201ENSMUST00000032768 4222 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
H3f3aP84244 Ric8b-202ENSMUST00000095385 2909 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
H3f3aP84244 Lpar2-202ENSMUST00000164890 5800 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
H3f3aP84244 Trim80-201ENSMUST00000093914 1934 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
H3f3aP84244 Top1mt-201ENSMUST00000000958 1903 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
H3f3aP84244 Mrps17-202ENSMUST00000118420 843 ntAPPRIS P1 TSL 2 BASIC12.2□□□□□ -0.46
H3f3aP84244 Pigyl-201ENSMUST00000123680 695 ntAPPRIS P1 TSL 2 BASIC12.2□□□□□ -0.46
H3f3aP84244 Nmi-205ENSMUST00000145481 1162 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
H3f3aP84244 Pfdn5-205ENSMUST00000166658 1062 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
H3f3aP84244 Gltpd2-202ENSMUST00000179000 794 ntAPPRIS ALT2 TSL 2 BASIC12.2□□□□□ -0.46
H3f3aP84244 1700022A21Rik-201ENSMUST00000182745 1051 ntBASIC12.2□□□□□ -0.46
H3f3aP84244 Gm31816-201ENSMUST00000209388 1294 ntTSL 5 BASIC12.2□□□□□ -0.46
H3f3aP84244 Pts-201ENSMUST00000034570 1046 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
H3f3aP84244 Ins1-201ENSMUST00000039652 1016 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
H3f3aP84244 Olfr750-201ENSMUST00000048478 1132 ntAPPRIS P1 BASIC12.2□□□□□ -0.46
H3f3aP84244 Gm2423-201ENSMUST00000074863 733 ntBASIC12.2□□□□□ -0.46
H3f3aP84244 Fam53b-201ENSMUST00000065371 5052 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
H3f3aP84244 Syt7-205ENSMUST00000224135 1557 ntBASIC12.2□□□□□ -0.46
H3f3aP84244 Grin2a-202ENSMUST00000115835 5023 ntAPPRIS P1 TSL 5 BASIC12.2□□□□□ -0.46
H3f3aP84244 Ror2-201ENSMUST00000021918 3985 ntAPPRIS P2 TSL 1 (best) BASIC12.2□□□□□ -0.46
H3f3aP84244 1810008I18Rik-201ENSMUST00000185464 2419 ntBASIC12.2□□□□□ -0.46
H3f3aP84244 Kcnh2-201ENSMUST00000036092 4221 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
H3f3aP84244 Naa15-205ENSMUST00000193266 7480 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
H3f3aP84244 H2-Q6-202ENSMUST00000174699 2085 ntAPPRIS P1 TSL 5 BASIC12.2□□□□□ -0.46
H3f3aP84244 Ldb3-207ENSMUST00000227819 1499 ntBASIC12.2□□□□□ -0.46
H3f3aP84244 Cdk11b-203ENSMUST00000105600 3170 ntAPPRIS P3 TSL 5 BASIC12.2□□□□□ -0.46
H3f3aP84244 Gm29358-201ENSMUST00000186510 1734 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
H3f3aP84244 Abtb2-201ENSMUST00000076212 4558 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
H3f3aP84244 Slc8a3-203ENSMUST00000182208 3433 ntAPPRIS P3 TSL 1 (best) BASIC12.2□□□□□ -0.46
Retrieved 100 of 76,532 protein–RNA pairs in 41.2 ms