Protein–RNA interactions for Protein: P82976

Gbx1, Homeobox protein GBX-1, mousemouse

Predictions only

Length 418 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gbx1P82976 Sirt2-201ENSMUST00000072965 1843 ntAPPRIS P3 TSL 1 (best) BASIC12.92□□□□□ -0.34
Gbx1P82976 Atg16l1-203ENSMUST00000113190 3102 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Gbx1P82976 Mcm9-206ENSMUST00000220007 3513 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Gbx1P82976 Rnf185-201ENSMUST00000064364 2906 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Gbx1P82976 Trp53-203ENSMUST00000108658 1771 ntAPPRIS P3 TSL 1 (best) BASIC12.92□□□□□ -0.34
Gbx1P82976 Trp53-201ENSMUST00000005371 1772 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Gbx1P82976 Vwa3b-202ENSMUST00000067178 1769 ntAPPRIS P5 TSL 2 BASIC12.92□□□□□ -0.34
Gbx1P82976 Gm14379-201ENSMUST00000128858 1878 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Gbx1P82976 Armcx1-202ENSMUST00000051256 2253 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Gbx1P82976 Zmynd15-202ENSMUST00000092958 2100 ntAPPRIS ALT2 TSL 5 BASIC12.91□□□□□ -0.34
Gbx1P82976 Smg5-201ENSMUST00000001451 4448 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Gbx1P82976 Ankrd6-204ENSMUST00000084750 4444 ntAPPRIS P2 TSL 5 BASIC12.91□□□□□ -0.34
Gbx1P82976 Gm38577-201ENSMUST00000221531 4545 ntBASIC12.91□□□□□ -0.34
Gbx1P82976 Olfml2a-201ENSMUST00000057279 5579 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Gbx1P82976 Gm7336-201ENSMUST00000107041 1232 ntBASIC12.91□□□□□ -0.34
Gbx1P82976 AC155937.1-201ENSMUST00000125635 831 ntAPPRIS P1 TSL 3 BASIC12.91□□□□□ -0.34
Gbx1P82976 Gm26771-201ENSMUST00000180472 1082 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Gbx1P82976 Ly6f-202ENSMUST00000189654 818 ntAPPRIS P1 TSL 2 BASIC12.91□□□□□ -0.34
Gbx1P82976 Gm33320-201ENSMUST00000192232 530 ntBASIC12.91□□□□□ -0.34
Gbx1P82976 Tpi-rs5-201ENSMUST00000216947 774 ntBASIC12.91□□□□□ -0.34
Gbx1P82976 Tmem116-202ENSMUST00000060004 1297 ntAPPRIS P3 TSL 1 (best) BASIC12.91□□□□□ -0.34
Gbx1P82976 Pcdh10-204ENSMUST00000193252 4638 ntAPPRIS ALT2 BASIC12.91□□□□□ -0.34
Gbx1P82976 H2-Q6-202ENSMUST00000174699 2085 ntAPPRIS P1 TSL 5 BASIC12.91□□□□□ -0.34
Gbx1P82976 Gm2762-202ENSMUST00000201517 2339 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Gbx1P82976 Agpat4-201ENSMUST00000024594 1915 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Gbx1P82976 Ulk3-201ENSMUST00000053230 2826 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Gbx1P82976 Gtf2a1l-201ENSMUST00000024970 1621 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Gbx1P82976 Eloa-201ENSMUST00000030427 4708 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Gbx1P82976 Ptgdr2-201ENSMUST00000037261 2644 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Gbx1P82976 Grin3a-202ENSMUST00000093859 7491 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Gbx1P82976 Knop1-204ENSMUST00000106550 5524 ntAPPRIS P3 TSL 1 (best) BASIC12.9□□□□□ -0.34
Gbx1P82976 Phldb1-201ENSMUST00000034611 5461 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Gbx1P82976 Cpeb4-201ENSMUST00000020543 2312 ntAPPRIS P2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Gbx1P82976 Itga6-202ENSMUST00000112101 4156 ntAPPRIS ALT1 TSL 5 BASIC12.9□□□□□ -0.34
Gbx1P82976 Nfic-202ENSMUST00000078185 3163 ntTSL 5 BASIC12.9□□□□□ -0.34
Gbx1P82976 Iffo2-201ENSMUST00000040023 5227 ntAPPRIS P3 TSL 5 BASIC12.9□□□□□ -0.34
Gbx1P82976 Gm35721-201ENSMUST00000220294 2014 ntTSL 5 BASIC12.9□□□□□ -0.34
Gbx1P82976 Mettl11b-201ENSMUST00000159679 1790 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Gbx1P82976 Gtf2a2-202ENSMUST00000118198 893 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Gbx1P82976 Gm27622-201ENSMUST00000183779 60 ntBASIC12.9□□□□□ -0.34
Gbx1P82976 Gm28277-201ENSMUST00000187450 885 ntTSL 3 BASIC12.9□□□□□ -0.34
Gbx1P82976 1700080E11Rik-202ENSMUST00000190661 682 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Gbx1P82976 Gm2213-201ENSMUST00000197485 688 ntBASIC12.9□□□□□ -0.34
Gbx1P82976 Gm42787-201ENSMUST00000200879 1164 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Gbx1P82976 Gm4971-201ENSMUST00000205991 1108 ntBASIC12.9□□□□□ -0.34
Gbx1P82976 Gm6566-201ENSMUST00000221468 1171 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Gbx1P82976 Prdx4-201ENSMUST00000026328 990 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Gbx1P82976 Col26a1-201ENSMUST00000057497 2724 ntAPPRIS P3 TSL 1 (best) BASIC12.9□□□□□ -0.34
Gbx1P82976 9930014A18Rik-201ENSMUST00000180730 3074 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Gbx1P82976 Emc3-201ENSMUST00000032425 1985 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Gbx1P82976 Pcdha12-201ENSMUST00000047614 5335 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Gbx1P82976 Ccdc171-204ENSMUST00000126429 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Gbx1P82976 Pbrm1-203ENSMUST00000052239 5065 ntAPPRIS ALT1 TSL 5 BASIC12.9□□□□□ -0.34
Gbx1P82976 Phka1-204ENSMUST00000119229 6025 ntAPPRIS ALT2 TSL 5 BASIC12.9□□□□□ -0.34
Gbx1P82976 Aptx-201ENSMUST00000030119 5250 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Gbx1P82976 Ctsa-203ENSMUST00000103093 2534 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Gbx1P82976 Ralgps2-214ENSMUST00000191605 2958 ntAPPRIS P3 TSL 1 (best) BASIC12.9□□□□□ -0.35
Gbx1P82976 Ube3a-201ENSMUST00000107537 4911 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.35
Gbx1P82976 Sgce-203ENSMUST00000101677 1656 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Gbx1P82976 Zfp354c-201ENSMUST00000000632 1683 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Gbx1P82976 Col6a2-202ENSMUST00000105413 4653 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Gbx1P82976 Gm10044-201ENSMUST00000081331 1312 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Gbx1P82976 Gm26777-201ENSMUST00000181852 2573 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Gbx1P82976 Gm6871-201ENSMUST00000073410 1430 ntAPPRIS ALT2 TSL 5 BASIC12.89□□□□□ -0.35
Gbx1P82976 Scin-202ENSMUST00000078481 2654 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Gbx1P82976 Rpl21-201ENSMUST00000035983 1856 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Gbx1P82976 Kif21b-201ENSMUST00000075164 9115 ntAPPRIS P1 TSL 2 BASIC12.89□□□□□ -0.35
Gbx1P82976 Fbxo41-203ENSMUST00000161546 6357 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Gbx1P82976 Stpg2-202ENSMUST00000106239 2055 ntAPPRIS P1 TSL 5 BASIC12.89□□□□□ -0.35
Gbx1P82976 Zbtb39-201ENSMUST00000054287 5960 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Gbx1P82976 Alkbh4-202ENSMUST00000100568 1714 ntAPPRIS P3 TSL 1 (best) BASIC12.89□□□□□ -0.35
Gbx1P82976 Il6ra-202ENSMUST00000197679 8639 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Gbx1P82976 Snph-201ENSMUST00000028951 4730 ntAPPRIS P3 TSL 1 (best) BASIC12.89□□□□□ -0.35
Gbx1P82976 Nfatc4-201ENSMUST00000024179 3267 ntAPPRIS P3 TSL 1 (best) BASIC12.89□□□□□ -0.35
Gbx1P82976 Meig1-204ENSMUST00000115083 567 ntAPPRIS P1 TSL 2 BASIC12.89□□□□□ -0.35
Gbx1P82976 Gm8410-201ENSMUST00000117225 605 ntBASIC12.89□□□□□ -0.35
Gbx1P82976 Gm15460-201ENSMUST00000118147 391 ntBASIC12.89□□□□□ -0.35
Gbx1P82976 Mansc4-202ENSMUST00000123367 542 ntAPPRIS ALT2 TSL 2 BASIC12.89□□□□□ -0.35
Gbx1P82976 3000002C10Rik-202ENSMUST00000133495 1008 ntBASIC12.89□□□□□ -0.35
Gbx1P82976 Gm17455-201ENSMUST00000164428 855 ntAPPRIS P1 TSL 3 BASIC12.89□□□□□ -0.35
Gbx1P82976 Iqcf1-202ENSMUST00000164965 523 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Gbx1P82976 Gm10044-204ENSMUST00000170177 659 ntTSL 3 BASIC12.89□□□□□ -0.35
Gbx1P82976 Ccdc24-209ENSMUST00000171052 891 ntAPPRIS P1 TSL 5 BASIC12.89□□□□□ -0.35
Gbx1P82976 Gm27702-201ENSMUST00000184512 56 ntBASIC12.89□□□□□ -0.35
Gbx1P82976 Ighv1-51-201ENSMUST00000192903 354 ntBASIC12.89□□□□□ -0.35
Gbx1P82976 Rbfox2-208ENSMUST00000227930 1218 ntBASIC12.89□□□□□ -0.35
Gbx1P82976 Prss38-201ENSMUST00000061481 1243 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Gbx1P82976 Krtap9-3-201ENSMUST00000062683 759 ntAPPRIS P1 BASIC12.89□□□□□ -0.35
Gbx1P82976 Hist1h2aa-201ENSMUST00000072391 390 ntAPPRIS P1 BASIC12.89□□□□□ -0.35
Gbx1P82976 Sema3f-204ENSMUST00000192727 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Gbx1P82976 Slc5a11-201ENSMUST00000033035 2396 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Gbx1P82976 Scg3-201ENSMUST00000034699 2384 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Gbx1P82976 Kdm5c-203ENSMUST00000112588 6449 ntAPPRIS P2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Gbx1P82976 Ncaph-201ENSMUST00000110387 2695 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Gbx1P82976 Hsf4-206ENSMUST00000173859 1576 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Gbx1P82976 Ugt1a5-201ENSMUST00000097659 2203 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Gbx1P82976 Gm26525-201ENSMUST00000180666 3616 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Gbx1P82976 Gm26867-201ENSMUST00000180963 3615 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Gbx1P82976 Bend7-201ENSMUST00000056914 2302 ntAPPRIS P3 TSL 1 (best) BASIC12.89□□□□□ -0.35
Gbx1P82976 Dzip1-202ENSMUST00000047208 4476 ntAPPRIS P1 TSL 5 BASIC12.89□□□□□ -0.35
Retrieved 100 of 76,532 protein–RNA pairs in 35.7 ms