Protein–RNA interactions for Protein: P63158

Hmgb1, High mobility group protein B1, mousemouse

Known RBP Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgb1P63158 Gm33337-201ENSMUST00000219594 228 ntTSL 3 BASIC15.12■□□□□ 0.01
Hmgb1P63158 Gm9229-201ENSMUST00000222777 126 ntBASIC15.12■□□□□ 0.01
Hmgb1P63158 Shd-206ENSMUST00000225145 998 ntBASIC15.12■□□□□ 0.01
Hmgb1P63158 Prr23a2-201ENSMUST00000071302 881 ntAPPRIS P1 BASIC15.12■□□□□ 0.01
Hmgb1P63158 H2-K1-202ENSMUST00000087189 579 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Hmgb1P63158 Gm13615-201ENSMUST00000120242 1612 ntBASIC15.12■□□□□ 0.01
Hmgb1P63158 Ulk3-201ENSMUST00000053230 2826 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Hmgb1P63158 Sema3b-205ENSMUST00000102532 3191 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Hmgb1P63158 Kcnd3-203ENSMUST00000118360 2668 ntAPPRIS P4 TSL 5 BASIC15.12■□□□□ 0.01
Hmgb1P63158 Mob1a-202ENSMUST00000055261 4412 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Hmgb1P63158 Zfp169-203ENSMUST00000176176 2162 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Hmgb1P63158 Gstcd-202ENSMUST00000080583 2394 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Hmgb1P63158 Cyp4x1os-201ENSMUST00000153951 2003 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Hmgb1P63158 Fam83e-201ENSMUST00000129507 2908 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Hmgb1P63158 Nfyb-204ENSMUST00000130911 2554 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Hmgb1P63158 Gucy1a2-201ENSMUST00000115733 2243 ntAPPRIS P1 TSL 2 BASIC15.12■□□□□ 0.01
Hmgb1P63158 Abhd3-202ENSMUST00000117726 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Hmgb1P63158 Uqcrq-201ENSMUST00000061326 1521 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Hmgb1P63158 Plekhb1-201ENSMUST00000079176 2079 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
Hmgb1P63158 Eif1ad-201ENSMUST00000025759 2469 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Hmgb1P63158 Zmynd15-202ENSMUST00000092958 2100 ntAPPRIS ALT2 TSL 5 BASIC15.11■□□□□ 0.01
Hmgb1P63158 5730409E04Rik-201ENSMUST00000097886 2886 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Hmgb1P63158 Dnajb5-204ENSMUST00000107973 2300 ntAPPRIS P2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Hmgb1P63158 Epb41-208ENSMUST00000105981 5303 ntAPPRIS P3 TSL 5 BASIC15.11■□□□□ 0.01
Hmgb1P63158 Hdac7-202ENSMUST00000088402 4223 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
Hmgb1P63158 Higd1a-205ENSMUST00000215007 1980 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Hmgb1P63158 Gpr85-201ENSMUST00000060442 3661 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Hmgb1P63158 Asb10-202ENSMUST00000117900 1432 ntTSL 5 BASIC15.11■□□□□ 0.01
Hmgb1P63158 Prkcq-201ENSMUST00000028118 3583 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Hmgb1P63158 Psd2-206ENSMUST00000177432 4367 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Hmgb1P63158 Steap2-203ENSMUST00000115425 4550 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Hmgb1P63158 Rasd2-201ENSMUST00000132133 1299 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Hmgb1P63158 Haghl-211ENSMUST00000150324 1267 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Hmgb1P63158 1810026B05Rik-205ENSMUST00000184855 409 ntTSL 3 BASIC15.11■□□□□ 0.01
Hmgb1P63158 Gm43691-201ENSMUST00000196625 697 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Hmgb1P63158 Gm4971-201ENSMUST00000205991 1108 ntBASIC15.11■□□□□ 0.01
Hmgb1P63158 Ldlrad3-201ENSMUST00000058790 3833 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Hmgb1P63158 Hist1h2aa-201ENSMUST00000072391 390 ntAPPRIS P1 BASIC15.11■□□□□ 0.01
Hmgb1P63158 Pcna-ps2-201ENSMUST00000088040 1257 ntAPPRIS P1 BASIC15.11■□□□□ 0.01
Hmgb1P63158 2610318N02Rik-201ENSMUST00000093336 1265 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Hmgb1P63158 Nptn-206ENSMUST00000176557 1898 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Hmgb1P63158 Slc12a8-202ENSMUST00000117134 2081 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Hmgb1P63158 Prr33-201ENSMUST00000054910 2251 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Hmgb1P63158 Mdga2-201ENSMUST00000037181 9833 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Hmgb1P63158 Qsox1-202ENSMUST00000111764 2722 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Hmgb1P63158 Plcd1-203ENSMUST00000214470 2706 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Hmgb1P63158 4933434M16Rik-202ENSMUST00000153429 1940 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Hmgb1P63158 Dusp13-201ENSMUST00000075040 1745 ntAPPRIS P2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Hmgb1P63158 Gm10044-201ENSMUST00000081331 1312 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Hmgb1P63158 Usf1-208ENSMUST00000161241 2167 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Hmgb1P63158 Grtp1-206ENSMUST00000210317 3013 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Hmgb1P63158 Hsf4-206ENSMUST00000173859 1576 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Hmgb1P63158 Slc38a7-204ENSMUST00000212270 3315 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Hmgb1P63158 Cct3-ps1-201ENSMUST00000118023 1647 ntBASIC15.1■□□□□ 0.01
Hmgb1P63158 Bnc2-215ENSMUST00000176691 3385 ntAPPRIS P2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Hmgb1P63158 Mettl14-201ENSMUST00000029759 2741 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Hmgb1P63158 Rtp3-201ENSMUST00000084922 1425 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
Hmgb1P63158 Cops7b-202ENSMUST00000121534 5383 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
Hmgb1P63158 Gm14379-201ENSMUST00000128858 1878 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Hmgb1P63158 Epb41l2-201ENSMUST00000053748 4385 ntAPPRIS P2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Hmgb1P63158 Cand1-201ENSMUST00000020315 7766 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Hmgb1P63158 Rtl6-201ENSMUST00000069476 4426 ntAPPRIS P1 BASIC15.1■□□□□ 0.01
Hmgb1P63158 Ppp4r3b-201ENSMUST00000020755 5125 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Hmgb1P63158 Maged2-203ENSMUST00000112699 2183 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Hmgb1P63158 Pars2-201ENSMUST00000058905 2191 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
Hmgb1P63158 Clcn4-203ENSMUST00000210061 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Hmgb1P63158 R3hdm2-212ENSMUST00000166820 4281 ntAPPRIS P2 TSL 5 BASIC15.1■□□□□ 0.01
Hmgb1P63158 Ropn1l-201ENSMUST00000110408 957 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Hmgb1P63158 Tmsb4x-202ENSMUST00000112175 864 ntTSL 2 BASIC15.1■□□□□ 0.01
Hmgb1P63158 Abhd11os-201ENSMUST00000136022 604 ntTSL 2 BASIC15.1■□□□□ 0.01
Hmgb1P63158 Cend1-204ENSMUST00000164387 1206 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Hmgb1P63158 Gm4804-201ENSMUST00000182234 999 ntBASIC15.1■□□□□ 0.01
Hmgb1P63158 Gm10605-201ENSMUST00000182342 665 ntTSL 3 BASIC15.1■□□□□ 0.01
Hmgb1P63158 Gm6283-201ENSMUST00000182369 1000 ntBASIC15.1■□□□□ 0.01
Hmgb1P63158 Gm27533-201ENSMUST00000183800 152 ntBASIC15.1■□□□□ 0.01
Hmgb1P63158 Tmem129-204ENSMUST00000200849 657 ntTSL 3 BASIC15.1■□□□□ 0.01
Hmgb1P63158 AC132104.2-201ENSMUST00000215011 266 ntBASIC15.1■□□□□ 0.01
Hmgb1P63158 Aif1-201ENSMUST00000025257 847 ntAPPRIS P1 TSL 2 BASIC15.1■□□□□ 0.01
Hmgb1P63158 Lce3b-201ENSMUST00000046234 562 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Hmgb1P63158 Smim4-202ENSMUST00000064032 791 ntTSL 3 BASIC15.1■□□□□ 0.01
Hmgb1P63158 Serpina16-201ENSMUST00000095451 1257 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
Hmgb1P63158 Ildr2-201ENSMUST00000111416 8251 ntAPPRIS P2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Hmgb1P63158 Cyfip1-201ENSMUST00000032629 6440 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Hmgb1P63158 1700065D16Rik-205ENSMUST00000190890 2903 ntBASIC15.1■□□□□ 0.01
Hmgb1P63158 Slc25a14-201ENSMUST00000033431 1760 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
Hmgb1P63158 Zfp444-204ENSMUST00000108567 5104 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Hmgb1P63158 Pcgf5-211ENSMUST00000225920 6443 ntBASIC15.1■□□□□ 0.01
Hmgb1P63158 Ube3b-201ENSMUST00000074002 5194 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Hmgb1P63158 A530083I20Rik-201ENSMUST00000180486 2421 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Hmgb1P63158 Ankrd50-201ENSMUST00000094300 1944 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Hmgb1P63158 Alkbh4-202ENSMUST00000100568 1714 ntAPPRIS P3 TSL 1 (best) BASIC15.09■□□□□ 0.01
Hmgb1P63158 Ankra2-208ENSMUST00000226100 1476 ntBASIC15.09■□□□□ 0.01
Hmgb1P63158 Bbs5-201ENSMUST00000074963 1468 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Hmgb1P63158 Dnmt1-207ENSMUST00000216540 5543 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Hmgb1P63158 Hnrnpul1-201ENSMUST00000043765 3354 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Hmgb1P63158 Gm4297-201ENSMUST00000119285 2579 ntAPPRIS P1 TSL 5 BASIC15.09■□□□□ 0.01
Hmgb1P63158 Nup98-206ENSMUST00000211235 3748 ntTSL 5 BASIC15.09■□□□□ 0.01
Hmgb1P63158 Ginm1-204ENSMUST00000124838 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Hmgb1P63158 Ttc5-201ENSMUST00000006451 1842 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Hmgb1P63158 Egr2-203ENSMUST00000127820 2665 ntAPPRIS ALT2 TSL 5 BASIC15.09■□□□□ 0.01
Retrieved 100 of 76,532 protein–RNA pairs in 50.5 ms