Protein–RNA interactions for Protein: P61620

Sec61a1, Protein transport protein Sec61 subunit alpha isoform 1, mousemouse

Known RBP Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sec61a1P61620 Polr2a-202ENSMUST00000071213 5799 ntTSL 5 BASIC12.13□□□□□ -0.47
Sec61a1P61620 AW209491-202ENSMUST00000178289 2035 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Sec61a1P61620 Emp1-206ENSMUST00000205156 2911 ntAPPRIS P1 TSL 5 BASIC12.13□□□□□ -0.47
Sec61a1P61620 8430429K09Rik-204ENSMUST00000146456 1675 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Sec61a1P61620 Samd7-201ENSMUST00000108262 3144 ntAPPRIS P1 TSL 5 BASIC12.13□□□□□ -0.47
Sec61a1P61620 Nphs2-201ENSMUST00000027896 3116 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Sec61a1P61620 Phactr3-202ENSMUST00000103066 2680 ntAPPRIS P4 TSL 1 (best) BASIC12.13□□□□□ -0.47
Sec61a1P61620 Ptpn1-201ENSMUST00000029053 4213 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Sec61a1P61620 Eno1b-201ENSMUST00000076155 1757 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Sec61a1P61620 Fam13b-201ENSMUST00000040506 3343 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Sec61a1P61620 Srebf2-201ENSMUST00000023100 4989 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Sec61a1P61620 AC154767.3-201ENSMUST00000225150 1342 ntBASIC12.12□□□□□ -0.47
Sec61a1P61620 Armcx1-205ENSMUST00000113199 2413 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Sec61a1P61620 Shc1-203ENSMUST00000107417 3079 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Sec61a1P61620 Nfxl1-202ENSMUST00000087216 3712 ntAPPRIS P1 TSL 5 BASIC12.12□□□□□ -0.47
Sec61a1P61620 Zyx-202ENSMUST00000164375 3188 ntAPPRIS P3 TSL 1 (best) BASIC12.12□□□□□ -0.47
Sec61a1P61620 Col22a1-202ENSMUST00000159993 8809 ntAPPRIS P1 TSL 5 BASIC12.12□□□□□ -0.47
Sec61a1P61620 Olfr279-202ENSMUST00000205772 5330 ntAPPRIS P1 TSL 3 BASIC12.12□□□□□ -0.47
Sec61a1P61620 Tigd2-201ENSMUST00000062626 3007 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Sec61a1P61620 Prrc2b-201ENSMUST00000036691 8612 ntAPPRIS P3 TSL 1 (best) BASIC12.12□□□□□ -0.47
Sec61a1P61620 Pde1c-209ENSMUST00000203372 3147 ntAPPRIS ALT2 TSL 5 BASIC12.12□□□□□ -0.47
Sec61a1P61620 Arhgap33-207ENSMUST00000208538 4372 ntAPPRIS P3 TSL 1 (best) BASIC12.12□□□□□ -0.47
Sec61a1P61620 E130218I03Rik-203ENSMUST00000125921 666 ntAPPRIS P1 TSL 2 BASIC12.12□□□□□ -0.47
Sec61a1P61620 E130218I03Rik-206ENSMUST00000135228 544 ntAPPRIS P1 TSL 3 BASIC12.12□□□□□ -0.47
Sec61a1P61620 E130218I03Rik-207ENSMUST00000143448 591 ntAPPRIS P1 TSL 3 BASIC12.12□□□□□ -0.47
Sec61a1P61620 Snu13-203ENSMUST00000166578 1061 ntTSL 2 BASIC12.12□□□□□ -0.47
Sec61a1P61620 Tmem217-202ENSMUST00000168339 812 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Sec61a1P61620 Hoga1-204ENSMUST00000172244 631 ntTSL 5 BASIC12.12□□□□□ -0.47
Sec61a1P61620 Ly6g6e-204ENSMUST00000172959 501 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Sec61a1P61620 Ighv8-7-201ENSMUST00000194349 297 ntBASIC12.12□□□□□ -0.47
Sec61a1P61620 Tcf4-248ENSMUST00000202354 2120 ntTSL 5 BASIC12.12□□□□□ -0.47
Sec61a1P61620 Tcf4-257ENSMUST00000202772 2125 ntTSL 5 BASIC12.12□□□□□ -0.47
Sec61a1P61620 Guca2b-201ENSMUST00000044426 605 ntAPPRIS P2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Sec61a1P61620 Gm5771-201ENSMUST00000049079 798 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Sec61a1P61620 Klk1-201ENSMUST00000075162 954 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Sec61a1P61620 Kcng1-201ENSMUST00000099069 2316 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Sec61a1P61620 Ccdc90b-201ENSMUST00000032842 1596 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Sec61a1P61620 Men1-202ENSMUST00000078137 2738 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Sec61a1P61620 Samd4b-204ENSMUST00000208199 4391 ntAPPRIS P1 TSL 5 BASIC12.12□□□□□ -0.47
Sec61a1P61620 Gzf1-201ENSMUST00000028928 4232 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Sec61a1P61620 Slc16a3-208ENSMUST00000168579 4335 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Sec61a1P61620 Lmo7-201ENSMUST00000100337 6092 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Sec61a1P61620 Gm42934-201ENSMUST00000196920 1345 ntBASIC12.11□□□□□ -0.47
Sec61a1P61620 Prss22-201ENSMUST00000041649 1323 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Sec61a1P61620 Hsd17b14-201ENSMUST00000107752 1400 ntAPPRIS P1 TSL 5 BASIC12.11□□□□□ -0.47
Sec61a1P61620 Akt2-ps-201ENSMUST00000120718 1449 ntBASIC12.11□□□□□ -0.47
Sec61a1P61620 Dusp23-201ENSMUST00000027826 1410 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Sec61a1P61620 Zscan22-204ENSMUST00000120809 1826 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Sec61a1P61620 Mark2-215ENSMUST00000168872 2124 ntAPPRIS ALT2 TSL 5 BASIC12.11□□□□□ -0.47
Sec61a1P61620 Olfr533-203ENSMUST00000215308 2345 ntAPPRIS P1 TSL 5 BASIC12.11□□□□□ -0.47
Sec61a1P61620 Spg7-202ENSMUST00000125975 2408 ntAPPRIS ALT2 TSL 5 BASIC12.11□□□□□ -0.47
Sec61a1P61620 Nek6-203ENSMUST00000112902 3147 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Sec61a1P61620 Map6-201ENSMUST00000068973 3430 ntAPPRIS P3 TSL 1 (best) BASIC12.11□□□□□ -0.47
Sec61a1P61620 Dst-213ENSMUST00000183302 8788 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Sec61a1P61620 Dhx37-201ENSMUST00000169485 4760 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Sec61a1P61620 Spag9-202ENSMUST00000041956 7340 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Sec61a1P61620 Arid5a-201ENSMUST00000097778 2270 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Sec61a1P61620 Nup205-204ENSMUST00000201374 6411 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Sec61a1P61620 Mecp2-203ENSMUST00000123362 1675 ntTSL 5 BASIC12.11□□□□□ -0.47
Sec61a1P61620 Mtif3-203ENSMUST00000110564 1257 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Sec61a1P61620 Mtif3-204ENSMUST00000110566 1134 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Sec61a1P61620 Abhd11-202ENSMUST00000111216 972 ntTSL 3 BASIC12.11□□□□□ -0.47
Sec61a1P61620 Abhd11os-201ENSMUST00000136022 604 ntTSL 2 BASIC12.11□□□□□ -0.47
Sec61a1P61620 Gm10044-204ENSMUST00000170177 659 ntTSL 3 BASIC12.11□□□□□ -0.47
Sec61a1P61620 Gm18737-201ENSMUST00000173594 937 ntBASIC12.11□□□□□ -0.47
Sec61a1P61620 Cdk2ap2-204ENSMUST00000174514 669 ntTSL 2 BASIC12.11□□□□□ -0.47
Sec61a1P61620 Gm26517-201ENSMUST00000181279 1172 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Sec61a1P61620 Gm6944-201ENSMUST00000182449 1006 ntBASIC12.11□□□□□ -0.47
Sec61a1P61620 4933437G19Rik-201ENSMUST00000197910 1178 ntBASIC12.11□□□□□ -0.47
Sec61a1P61620 AC124732.2-201ENSMUST00000221977 316 ntBASIC12.11□□□□□ -0.47
Sec61a1P61620 Smim8-201ENSMUST00000029972 786 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Sec61a1P61620 Glis2-201ENSMUST00000014447 3619 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Sec61a1P61620 Ywhab-201ENSMUST00000018470 3013 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Sec61a1P61620 Sgtb-201ENSMUST00000044385 3048 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Sec61a1P61620 Cfap69-201ENSMUST00000054865 4956 ntAPPRIS P2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Sec61a1P61620 Gm39377-201ENSMUST00000214587 2533 ntTSL 5 BASIC12.11□□□□□ -0.47
Sec61a1P61620 Spred3-201ENSMUST00000048923 4056 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Sec61a1P61620 Taf6-201ENSMUST00000048698 2304 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Sec61a1P61620 Dysf-213ENSMUST00000203803 6590 ntTSL 5 BASIC12.11□□□□□ -0.47
Sec61a1P61620 Dab2ip-204ENSMUST00000112983 6051 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Sec61a1P61620 Pgap2-225ENSMUST00000156529 2034 ntAPPRIS P2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Sec61a1P61620 Nek7-201ENSMUST00000027642 3737 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Sec61a1P61620 Bach2-202ENSMUST00000108180 8882 ntAPPRIS P2 TSL 5 BASIC12.11□□□□□ -0.47
Sec61a1P61620 Ate1-202ENSMUST00000035458 4685 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Sec61a1P61620 Krt42-201ENSMUST00000017270 1542 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Sec61a1P61620 Gdf6-201ENSMUST00000057613 3532 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Sec61a1P61620 Nr4a2-203ENSMUST00000112629 3422 ntAPPRIS P1 TSL 5 BASIC12.11□□□□□ -0.47
Sec61a1P61620 2810408A11Rik-202ENSMUST00000100969 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Sec61a1P61620 Gm16845-201ENSMUST00000180419 1415 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Sec61a1P61620 Lingo1-202ENSMUST00000114247 2287 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Sec61a1P61620 Troap-201ENSMUST00000039665 2264 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Sec61a1P61620 Necab1-201ENSMUST00000041606 4922 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Sec61a1P61620 Rhbdl1-202ENSMUST00000183929 1349 ntTSL 5 BASIC12.11□□□□□ -0.47
Sec61a1P61620 Hcrtr1-201ENSMUST00000030562 2187 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Sec61a1P61620 Klf4-201ENSMUST00000107619 3029 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Sec61a1P61620 Cluh-201ENSMUST00000092915 5379 ntAPPRIS P2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Sec61a1P61620 Il11ra1-203ENSMUST00000108041 1953 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Sec61a1P61620 Gm2155-201ENSMUST00000181581 1974 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Sec61a1P61620 Samhd1-202ENSMUST00000088523 1996 ntAPPRIS ALT2 TSL 5 BASIC12.1□□□□□ -0.47
Sec61a1P61620 Gm13305-201ENSMUST00000098121 1953 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Retrieved 100 of 76,532 protein–RNA pairs in 28.7 ms