Protein–RNA interactions for Protein: P58771

Tpm1, Tropomyosin alpha-1 chain, mousemouse

Predictions only

Length 284 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tpm1P58771 Ric8b-202ENSMUST00000095385 2909 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Tpm1P58771 Crhr2-201ENSMUST00000003568 2695 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Tpm1P58771 Nt5c-202ENSMUST00000106530 836 ntTSL 3 BASIC15.29■□□□□ 0.04
Tpm1P58771 Gm6973-201ENSMUST00000117080 721 ntBASIC15.29■□□□□ 0.04
Tpm1P58771 Gm16046-203ENSMUST00000150889 1001 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Tpm1P58771 Gm10459-201ENSMUST00000202708 1155 ntBASIC15.29■□□□□ 0.04
Tpm1P58771 CT030684.1-201ENSMUST00000227292 914 ntBASIC15.29■□□□□ 0.04
Tpm1P58771 Fam26f-201ENSMUST00000062784 1094 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Tpm1P58771 Synpo-209ENSMUST00000143275 5040 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
Tpm1P58771 Armcx1-205ENSMUST00000113199 2413 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Tpm1P58771 Sema3f-204ENSMUST00000192727 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Tpm1P58771 Brwd1-201ENSMUST00000023631 8209 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Tpm1P58771 Wipf3-201ENSMUST00000126637 4414 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
Tpm1P58771 Strip1-201ENSMUST00000064759 3215 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Tpm1P58771 Stpg2-202ENSMUST00000106239 2055 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
Tpm1P58771 Hmga2-203ENSMUST00000159699 3810 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Tpm1P58771 Efr3a-205ENSMUST00000173858 2848 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Tpm1P58771 E230013L22Rik-201ENSMUST00000180408 1856 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Tpm1P58771 Gm7899-201ENSMUST00000192935 1897 ntBASIC15.29■□□□□ 0.04
Tpm1P58771 Zfp385c-201ENSMUST00000103119 2766 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Tpm1P58771 St6gal1-201ENSMUST00000023601 4506 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Tpm1P58771 Tmprss9-203ENSMUST00000219817 3581 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
Tpm1P58771 Dda1-206ENSMUST00000138892 1738 ntTSL 3 BASIC15.29■□□□□ 0.04
Tpm1P58771 Hnrnph2-201ENSMUST00000050331 1701 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
Tpm1P58771 Mfap4-202ENSMUST00000064783 1722 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
Tpm1P58771 Gm44241-201ENSMUST00000203230 1662 ntBASIC15.28■□□□□ 0.04
Tpm1P58771 Cradd-201ENSMUST00000053594 1661 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Tpm1P58771 0610010F05Rik-208ENSMUST00000180260 4128 ntAPPRIS P2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Tpm1P58771 Hcrtr1-203ENSMUST00000120154 2161 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Tpm1P58771 Tppp3-203ENSMUST00000177126 1396 ntAPPRIS P1 TSL 3 BASIC15.28■□□□□ 0.04
Tpm1P58771 Cnih4-204ENSMUST00000134115 3268 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Tpm1P58771 Cep295nl-201ENSMUST00000103024 1944 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Tpm1P58771 Tpm3-203ENSMUST00000119158 1090 ntTSL 3 BASIC15.28■□□□□ 0.04
Tpm1P58771 Gm16122-201ENSMUST00000142625 1158 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Tpm1P58771 Gm11682-201ENSMUST00000144689 516 ntTSL 3 BASIC15.28■□□□□ 0.04
Tpm1P58771 4930570G19Rik-204ENSMUST00000149387 986 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Tpm1P58771 Timm23-206ENSMUST00000170331 777 ntTSL 3 BASIC15.28■□□□□ 0.04
Tpm1P58771 Nabp1-202ENSMUST00000185534 708 ntTSL 2 BASIC15.28■□□□□ 0.04
Tpm1P58771 Rnf2-203ENSMUST00000186415 1106 ntTSL 5 BASIC15.28■□□□□ 0.04
Tpm1P58771 Lmo4-207ENSMUST00000196264 1263 ntTSL 5 BASIC15.28■□□□□ 0.04
Tpm1P58771 Ighv8-14-201ENSMUST00000196781 358 ntBASIC15.28■□□□□ 0.04
Tpm1P58771 Ggn-201ENSMUST00000033886 588 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Tpm1P58771 Tlcd2-201ENSMUST00000043598 1153 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
Tpm1P58771 2300002M23Rik-201ENSMUST00000044326 1290 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Tpm1P58771 1700086L19Rik-201ENSMUST00000095617 706 ntBASIC15.28■□□□□ 0.04
Tpm1P58771 Actn4-211ENSMUST00000217157 3530 ntTSL 5 BASIC15.28■□□□□ 0.04
Tpm1P58771 Rtn3-203ENSMUST00000088169 1709 ntTSL 5 BASIC15.28■□□□□ 0.04
Tpm1P58771 Rnf214-201ENSMUST00000058720 3964 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
Tpm1P58771 Slitrk5-201ENSMUST00000042767 4831 ntAPPRIS P1 TSL 2 BASIC15.28■□□□□ 0.04
Tpm1P58771 Kyat1-204ENSMUST00000113661 2057 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Tpm1P58771 Col14a1-203ENSMUST00000110221 5679 ntAPPRIS P2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Tpm1P58771 Pja1-201ENSMUST00000036354 2563 ntAPPRIS P4 TSL 1 (best) BASIC15.28■□□□□ 0.04
Tpm1P58771 Mdm2-201ENSMUST00000020408 3099 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Tpm1P58771 Rnf4-204ENSMUST00000182047 2944 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Tpm1P58771 Sbk2-205ENSMUST00000208109 1422 ntTSL 5 BASIC15.27■□□□□ 0.04
Tpm1P58771 Aldh3b1-201ENSMUST00000051803 1875 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Tpm1P58771 Pcdh8-201ENSMUST00000039568 4000 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.04
Tpm1P58771 Trp73-201ENSMUST00000097762 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
Tpm1P58771 Nmi-205ENSMUST00000145481 1162 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Tpm1P58771 Rhox13-201ENSMUST00000152730 876 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Tpm1P58771 Cby3-202ENSMUST00000164067 731 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.04
Tpm1P58771 Rpph1-201ENSMUST00000175096 319 ntBASIC15.27■□□□□ 0.04
Tpm1P58771 Gm38554-201ENSMUST00000201639 708 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Tpm1P58771 Gm7229-201ENSMUST00000214719 1007 ntBASIC15.27■□□□□ 0.04
Tpm1P58771 CT030704.2-201ENSMUST00000228887 494 ntBASIC15.27■□□□□ 0.04
Tpm1P58771 Mgst3-201ENSMUST00000028005 1097 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Tpm1P58771 Intu-202ENSMUST00000091186 6387 ntAPPRIS P2 TSL 1 (best) BASIC15.27■□□□□ 0.04
Tpm1P58771 Mcoln2-201ENSMUST00000011152 2520 ntAPPRIS P4 TSL 1 (best) BASIC15.27■□□□□ 0.03
Tpm1P58771 Lrriq4-201ENSMUST00000108265 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.03
Tpm1P58771 Gm45638-201ENSMUST00000211507 2878 ntBASIC15.27■□□□□ 0.03
Tpm1P58771 Tmem181b-ps-203ENSMUST00000188746 1626 ntTSL 5 BASIC15.27■□□□□ 0.03
Tpm1P58771 4933434M16Rik-202ENSMUST00000153429 1940 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
Tpm1P58771 Pax6-202ENSMUST00000090397 3069 ntAPPRIS ALT1 TSL 5 BASIC15.27■□□□□ 0.03
Tpm1P58771 Tcirg1-201ENSMUST00000001801 2688 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Tpm1P58771 Kyat1-205ENSMUST00000113662 1850 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.03
Tpm1P58771 Togaram2-205ENSMUST00000153445 3302 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.03
Tpm1P58771 Chrna10-201ENSMUST00000084830 2513 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Tpm1P58771 Olfr533-204ENSMUST00000216258 2874 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
Tpm1P58771 Irf3-202ENSMUST00000107834 1429 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Tpm1P58771 Fchsd1-201ENSMUST00000043437 4270 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Tpm1P58771 Phf21a-206ENSMUST00000111292 2461 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
Tpm1P58771 C130026L21Rik-201ENSMUST00000064930 2472 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Tpm1P58771 Eef1d-206ENSMUST00000109975 2842 ntTSL 5 BASIC15.26■□□□□ 0.03
Tpm1P58771 Ywhab-201ENSMUST00000018470 3013 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Tpm1P58771 Setdb2-201ENSMUST00000095775 3034 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
Tpm1P58771 Plxnb2-201ENSMUST00000060808 6394 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
Tpm1P58771 Zyx-201ENSMUST00000070635 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Tpm1P58771 Chchd5-201ENSMUST00000035481 1325 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Tpm1P58771 Rgs12-205ENSMUST00000114283 2628 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
Tpm1P58771 Kcp-203ENSMUST00000101614 4885 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Tpm1P58771 Cfp-201ENSMUST00000001156 1636 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Tpm1P58771 Abcc5-202ENSMUST00000079158 5811 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Tpm1P58771 Il15ra-206ENSMUST00000114834 784 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Tpm1P58771 Ap2s1-204ENSMUST00000205607 372 ntTSL 3 BASIC15.26■□□□□ 0.03
Tpm1P58771 AC159295.1-201ENSMUST00000225326 940 ntBASIC15.26■□□□□ 0.03
Tpm1P58771 AC121598.1-201ENSMUST00000228224 1019 ntBASIC15.26■□□□□ 0.03
Tpm1P58771 Eef1akmt2-201ENSMUST00000033257 1107 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Tpm1P58771 Pmf1-201ENSMUST00000056370 1007 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Tpm1P58771 Mdk-202ENSMUST00000069423 773 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Tpm1P58771 Pmm1-202ENSMUST00000071462 1059 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Retrieved 100 of 76,532 protein–RNA pairs in 28.8 ms