Protein–RNA interactions for Protein: P54823

Ddx6, Probable ATP-dependent RNA helicase DDX6, mousemouse

Known RBP Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx6P54823 AC173210.1-201ENSMUST00000222341 1131 ntBASIC13.9□□□□□ -0.18
Ddx6P54823 Oit1-201ENSMUST00000022269 1253 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Ddx6P54823 Fgfr1op2-201ENSMUST00000037836 687 ntTSL 3 BASIC13.9□□□□□ -0.18
Ddx6P54823 Gm16372-201ENSMUST00000073088 450 ntBASIC13.9□□□□□ -0.18
Ddx6P54823 Rprd1b-202ENSMUST00000103123 4504 ntAPPRIS P3 TSL 1 (best) BASIC13.9□□□□□ -0.18
Ddx6P54823 Mmp21-201ENSMUST00000033278 1858 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Ddx6P54823 Asah1-201ENSMUST00000034000 2773 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Ddx6P54823 Tchp-201ENSMUST00000094441 2882 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Ddx6P54823 Mapk7-202ENSMUST00000101085 3254 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Ddx6P54823 Gm20632-201ENSMUST00000176760 2427 ntBASIC13.9□□□□□ -0.18
Ddx6P54823 Rap2b-201ENSMUST00000049064 6793 ntAPPRIS P1 BASIC13.9□□□□□ -0.18
Ddx6P54823 Ap1s2-202ENSMUST00000069041 2226 ntAPPRIS P4 TSL 1 (best) BASIC13.9□□□□□ -0.18
Ddx6P54823 Gm13075-202ENSMUST00000149247 1621 ntTSL 5 BASIC13.9□□□□□ -0.19
Ddx6P54823 Gpr19-208ENSMUST00000165392 1643 ntTSL 3 BASIC13.9□□□□□ -0.19
Ddx6P54823 Ywhag-205ENSMUST00000198270 1610 ntAPPRIS P1 TSL 5 BASIC13.9□□□□□ -0.19
Ddx6P54823 Gpr19-202ENSMUST00000066107 1647 ntTSL 1 (best) BASIC13.9□□□□□ -0.19
Ddx6P54823 Fbxo21-201ENSMUST00000035579 3883 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.19
Ddx6P54823 Ociad2-205ENSMUST00000201908 2378 ntTSL 2 BASIC13.89□□□□□ -0.19
Ddx6P54823 Kcnj9-202ENSMUST00000194204 2265 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Ddx6P54823 Gm13111-201ENSMUST00000136217 3542 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Ddx6P54823 Neil1-203ENSMUST00000190245 1693 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Ddx6P54823 Hipk4-202ENSMUST00000108353 2409 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Ddx6P54823 Lats2-210ENSMUST00000174694 3287 ntAPPRIS P1 TSL 2 BASIC13.89□□□□□ -0.19
Ddx6P54823 Gosr2-202ENSMUST00000107013 1044 ntTSL 2 BASIC13.89□□□□□ -0.19
Ddx6P54823 Snap25-202ENSMUST00000110098 1014 ntAPPRIS ALT1 TSL 3 BASIC13.89□□□□□ -0.19
Ddx6P54823 Htr2c-203ENSMUST00000112831 809 ntTSL 3 BASIC13.89□□□□□ -0.19
Ddx6P54823 Hypk-204ENSMUST00000126764 961 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Ddx6P54823 1700037C18Rik-205ENSMUST00000177323 915 ntAPPRIS ALT2 TSL 5 BASIC13.89□□□□□ -0.19
Ddx6P54823 Gm5370-201ENSMUST00000187187 574 ntBASIC13.89□□□□□ -0.19
Ddx6P54823 Ssr2-202ENSMUST00000192495 620 ntTSL 5 BASIC13.89□□□□□ -0.19
Ddx6P54823 Chfr-212ENSMUST00000200038 606 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Ddx6P54823 Gm45564-201ENSMUST00000210460 530 ntTSL 5 BASIC13.89□□□□□ -0.19
Ddx6P54823 Reep1-202ENSMUST00000212631 953 ntTSL 5 BASIC13.89□□□□□ -0.19
Ddx6P54823 AC155237.1-201ENSMUST00000226196 1279 ntBASIC13.89□□□□□ -0.19
Ddx6P54823 Mdk-201ENSMUST00000028672 1054 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Ddx6P54823 Hspb2-201ENSMUST00000042790 773 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Ddx6P54823 S100a8-201ENSMUST00000069927 486 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Ddx6P54823 Gm11562-201ENSMUST00000073853 817 ntAPPRIS P1 BASIC13.89□□□□□ -0.19
Ddx6P54823 Rnf44-201ENSMUST00000037422 3734 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Ddx6P54823 Il15-201ENSMUST00000034148 1908 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Ddx6P54823 Rtn3-203ENSMUST00000088169 1709 ntTSL 5 BASIC13.89□□□□□ -0.19
Ddx6P54823 Arid1b-202ENSMUST00000115797 11325 ntAPPRIS P2 TSL 5 BASIC13.89□□□□□ -0.19
Ddx6P54823 Cry1-201ENSMUST00000020227 3026 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Ddx6P54823 Rhbdd3-203ENSMUST00000109878 1611 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Ddx6P54823 Mst1-201ENSMUST00000035211 2262 ntAPPRIS P2 TSL 1 (best) BASIC13.89□□□□□ -0.19
Ddx6P54823 Grik4-202ENSMUST00000114865 5887 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Ddx6P54823 Ppip5k2-201ENSMUST00000042509 5882 ntAPPRIS P2 TSL 1 (best) BASIC13.89□□□□□ -0.19
Ddx6P54823 Gm15544-201ENSMUST00000118776 1531 ntBASIC13.89□□□□□ -0.19
Ddx6P54823 Smpd3-202ENSMUST00000212896 2626 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Ddx6P54823 Tor1aip1-201ENSMUST00000027738 1952 ntAPPRIS P3 TSL 1 (best) BASIC13.89□□□□□ -0.19
Ddx6P54823 Usp20-202ENSMUST00000102849 5088 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Ddx6P54823 Rps13-203ENSMUST00000205490 1317 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Ddx6P54823 Rgs20-201ENSMUST00000002533 1778 ntAPPRIS P3 TSL 1 (best) BASIC13.88□□□□□ -0.19
Ddx6P54823 Nrap-201ENSMUST00000040711 5334 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Ddx6P54823 Kcnf1-201ENSMUST00000170580 4789 ntAPPRIS P1 BASIC13.88□□□□□ -0.19
Ddx6P54823 Zfp668-204ENSMUST00000106263 3132 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Ddx6P54823 Pbx3-201ENSMUST00000040638 2587 ntAPPRIS P3 TSL 1 (best) BASIC13.88□□□□□ -0.19
Ddx6P54823 Smarce1-201ENSMUST00000103133 2919 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Ddx6P54823 Mcrs1-201ENSMUST00000041190 1915 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Ddx6P54823 Dmxl1-202ENSMUST00000180611 11319 ntAPPRIS P2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Ddx6P54823 Tbrg4-201ENSMUST00000000394 2290 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Ddx6P54823 Pdcd6-203ENSMUST00000222759 1376 ntAPPRIS ALT1 TSL 2 BASIC13.88□□□□□ -0.19
Ddx6P54823 Mff-201ENSMUST00000073025 1706 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Ddx6P54823 Gypc-202ENSMUST00000174000 2072 ntAPPRIS ALT2 TSL 3 BASIC13.88□□□□□ -0.19
Ddx6P54823 Cdk16-201ENSMUST00000033380 3120 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Ddx6P54823 Slc6a9-201ENSMUST00000030269 3479 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Ddx6P54823 Arpc3-203ENSMUST00000111713 708 ntTSL 3 BASIC13.88□□□□□ -0.19
Ddx6P54823 Mrpl40-202ENSMUST00000119273 778 ntTSL 3 BASIC13.88□□□□□ -0.19
Ddx6P54823 Cdk4-202ENSMUST00000120226 714 ntTSL 5 BASIC13.88□□□□□ -0.19
Ddx6P54823 Gm4271-201ENSMUST00000174444 973 ntBASIC13.88□□□□□ -0.19
Ddx6P54823 Gm8565-201ENSMUST00000183259 1014 ntBASIC13.88□□□□□ -0.19
Ddx6P54823 Gm27514-201ENSMUST00000183692 110 ntBASIC13.88□□□□□ -0.19
Ddx6P54823 Gm42693-201ENSMUST00000196779 631 ntBASIC13.88□□□□□ -0.19
Ddx6P54823 Gm43303-201ENSMUST00000200133 669 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Ddx6P54823 Trmt112-ps1-201ENSMUST00000202320 375 ntBASIC13.88□□□□□ -0.19
Ddx6P54823 2310002L09Rik-201ENSMUST00000030101 958 ntAPPRIS P3 TSL 1 (best) BASIC13.88□□□□□ -0.19
Ddx6P54823 Mcrip1-201ENSMUST00000034913 1205 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Ddx6P54823 Gm3695-201ENSMUST00000087222 1009 ntBASIC13.88□□□□□ -0.19
Ddx6P54823 Gm11563-201ENSMUST00000092695 1012 ntAPPRIS P1 BASIC13.88□□□□□ -0.19
Ddx6P54823 B230118H07Rik-202ENSMUST00000099682 895 ntAPPRIS ALT2 TSL 5 BASIC13.88□□□□□ -0.19
Ddx6P54823 Cdk5r1-201ENSMUST00000053413 4162 ntAPPRIS P1 BASIC13.88□□□□□ -0.19
Ddx6P54823 Rrp1b-201ENSMUST00000081339 4874 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Ddx6P54823 Rnf152-201ENSMUST00000058688 8492 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Ddx6P54823 Tpk1-201ENSMUST00000067888 2671 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Ddx6P54823 Iah1-204ENSMUST00000223345 1890 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Ddx6P54823 Plxna1-202ENSMUST00000163139 9034 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Ddx6P54823 Cep170b-203ENSMUST00000179041 6565 ntAPPRIS P1 TSL 5 BASIC13.88□□□□□ -0.19
Ddx6P54823 Slc2a6-201ENSMUST00000045702 2138 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Ddx6P54823 Zfand3-201ENSMUST00000057897 2617 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Ddx6P54823 Col25a1-201ENSMUST00000080335 2624 ntAPPRIS P4 TSL 5 BASIC13.88□□□□□ -0.19
Ddx6P54823 Clec16a-211ENSMUST00000155633 6213 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Ddx6P54823 Troap-201ENSMUST00000039665 2264 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Ddx6P54823 Ecm1-202ENSMUST00000117507 1900 ntAPPRIS P3 TSL 1 (best) BASIC13.88□□□□□ -0.19
Ddx6P54823 Sgsm1-201ENSMUST00000048112 5161 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Ddx6P54823 Sympk-201ENSMUST00000023882 4116 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Ddx6P54823 Kdm4b-202ENSMUST00000086835 4360 ntAPPRIS ALT2 TSL 5 BASIC13.87□□□□□ -0.19
Ddx6P54823 Arid3a-202ENSMUST00000105376 4892 ntAPPRIS P3 TSL 1 (best) BASIC13.87□□□□□ -0.19
Ddx6P54823 Acd-201ENSMUST00000042608 3154 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Ddx6P54823 Foxj3-201ENSMUST00000044564 4789 ntAPPRIS P3 TSL 1 (best) BASIC13.87□□□□□ -0.19
Ddx6P54823 Syngr1-201ENSMUST00000009727 4180 ntAPPRIS P4 TSL 1 (best) BASIC13.87□□□□□ -0.19
Retrieved 100 of 76,532 protein–RNA pairs in 30.4 ms