Protein–RNA interactions for Protein: P54254

Atxn1, Ataxin-1, mousemouse

Predictions only

Length 791 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atxn1P54254 Olfr286-202ENSMUST00000205305 969 ntBASIC13.62□□□□□ -0.23
Atxn1P54254 AC134335.2-201ENSMUST00000227660 440 ntBASIC13.62□□□□□ -0.23
Atxn1P54254 Oxt-201ENSMUST00000028764 537 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Atxn1P54254 Tmem40-201ENSMUST00000072933 1272 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
Atxn1P54254 Tmem9b-202ENSMUST00000118571 1771 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Atxn1P54254 Col2a1-202ENSMUST00000088355 4862 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Atxn1P54254 Tomm34-202ENSMUST00000109384 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Atxn1P54254 Gm10457-201ENSMUST00000222619 1906 ntTSL 2 BASIC13.62□□□□□ -0.23
Atxn1P54254 Marveld3-202ENSMUST00000051430 2447 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Atxn1P54254 Gata4-201ENSMUST00000067417 3400 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Atxn1P54254 Nop9-201ENSMUST00000019441 3694 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Atxn1P54254 Osbpl8-202ENSMUST00000105275 7204 ntAPPRIS ALT1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Atxn1P54254 Rnf31-201ENSMUST00000019443 3485 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Atxn1P54254 Proser2-202ENSMUST00000114942 4398 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Atxn1P54254 Parp3-203ENSMUST00000123555 2495 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
Atxn1P54254 Trim32-201ENSMUST00000050850 3194 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Atxn1P54254 Emb-201ENSMUST00000022242 2923 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Atxn1P54254 Sostdc1-201ENSMUST00000041407 1781 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Atxn1P54254 Acp6-201ENSMUST00000090759 1754 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Atxn1P54254 Sgce-205ENSMUST00000115579 1696 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Atxn1P54254 AC148324.1-201ENSMUST00000219034 4240 ntBASIC13.61□□□□□ -0.23
Atxn1P54254 Gh-201ENSMUST00000103071 862 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Atxn1P54254 Mir877-201ENSMUST00000104738 85 ntBASIC13.61□□□□□ -0.23
Atxn1P54254 Rasgrp2-207ENSMUST00000113475 573 ntTSL 5 BASIC13.61□□□□□ -0.23
Atxn1P54254 Gm8749-201ENSMUST00000117737 331 ntBASIC13.61□□□□□ -0.23
Atxn1P54254 Isg20-202ENSMUST00000118867 697 ntAPPRIS P1 TSL 3 BASIC13.61□□□□□ -0.23
Atxn1P54254 Zfp629-204ENSMUST00000128731 823 ntTSL 3 BASIC13.61□□□□□ -0.23
Atxn1P54254 Gm12786-201ENSMUST00000129617 644 ntTSL 3 BASIC13.61□□□□□ -0.23
Atxn1P54254 Gm11261-203ENSMUST00000132470 838 ntTSL 5 BASIC13.61□□□□□ -0.23
Atxn1P54254 Tmem205-202ENSMUST00000178988 862 ntAPPRIS P1 TSL 2 BASIC13.61□□□□□ -0.23
Atxn1P54254 Gm27501-201ENSMUST00000183599 107 ntBASIC13.61□□□□□ -0.23
Atxn1P54254 Mir7070-201ENSMUST00000183657 86 ntBASIC13.61□□□□□ -0.23
Atxn1P54254 Gm44364-201ENSMUST00000198368 141 ntBASIC13.61□□□□□ -0.23
Atxn1P54254 Gm38671-201ENSMUST00000200573 130 ntBASIC13.61□□□□□ -0.23
Atxn1P54254 Spc24-204ENSMUST00000216057 627 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Atxn1P54254 Gm19309-201ENSMUST00000218295 205 ntBASIC13.61□□□□□ -0.23
Atxn1P54254 Gm9176-201ENSMUST00000219955 1120 ntBASIC13.61□□□□□ -0.23
Atxn1P54254 AC192088.1-201ENSMUST00000227561 301 ntBASIC13.61□□□□□ -0.23
Atxn1P54254 Ndufb3-201ENSMUST00000027193 763 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Atxn1P54254 Tomm7-201ENSMUST00000030851 1125 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Atxn1P54254 Krtcap2-201ENSMUST00000040888 1172 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Atxn1P54254 Ece2-204ENSMUST00000133344 3042 ntAPPRIS ALT1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Atxn1P54254 Ulk1-211ENSMUST00000200299 3581 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Atxn1P54254 Synj2-210ENSMUST00000115791 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Atxn1P54254 Gm21451-201ENSMUST00000111062 2775 ntBASIC13.61□□□□□ -0.23
Atxn1P54254 Prkcd-207ENSMUST00000112210 2777 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
Atxn1P54254 Vta1-205ENSMUST00000154132 1974 ntAPPRIS P2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Atxn1P54254 Ctu2-201ENSMUST00000116412 3066 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Atxn1P54254 Tmem184c-201ENSMUST00000034030 2678 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Atxn1P54254 Sema3b-201ENSMUST00000073448 2987 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Atxn1P54254 Adck5-214ENSMUST00000162503 2040 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
Atxn1P54254 Zbtb20-203ENSMUST00000114691 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Atxn1P54254 Pdlim3-203ENSMUST00000210422 1479 ntAPPRIS ALT1 TSL 5 BASIC13.61□□□□□ -0.23
Atxn1P54254 Plcb3-201ENSMUST00000025912 4201 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Atxn1P54254 AC159649.2-201ENSMUST00000222984 3223 ntBASIC13.6□□□□□ -0.23
Atxn1P54254 Gdap1l1-201ENSMUST00000018087 2220 ntAPPRIS P2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Atxn1P54254 Fubp1-206ENSMUST00000196739 2526 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Atxn1P54254 Slc43a1-201ENSMUST00000028469 2539 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Atxn1P54254 Tmem39a-214ENSMUST00000171687 2667 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Atxn1P54254 Mylk2-201ENSMUST00000028970 2951 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Atxn1P54254 Gm15816-201ENSMUST00000141930 1688 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Atxn1P54254 Gm44645-201ENSMUST00000205492 1653 ntBASIC13.6□□□□□ -0.23
Atxn1P54254 Ube2d-ps-205ENSMUST00000142942 1840 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Atxn1P54254 Fam118b-203ENSMUST00000121564 1962 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Atxn1P54254 Plekha1-201ENSMUST00000048180 3321 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Atxn1P54254 Trav13-3-201ENSMUST00000117226 336 ntBASIC13.6□□□□□ -0.23
Atxn1P54254 Gm13496-201ENSMUST00000141133 1165 ntTSL 2 BASIC13.6□□□□□ -0.23
Atxn1P54254 Gm14617-202ENSMUST00000144208 607 ntTSL 3 BASIC13.6□□□□□ -0.23
Atxn1P54254 Gm15444-201ENSMUST00000148335 388 ntTSL 5 BASIC13.6□□□□□ -0.23
Atxn1P54254 Gm26083-201ENSMUST00000157904 193 ntBASIC13.6□□□□□ -0.23
Atxn1P54254 Gm17180-201ENSMUST00000172211 435 ntTSL 3 BASIC13.6□□□□□ -0.23
Atxn1P54254 Gm20652-201ENSMUST00000177314 383 ntTSL 2 BASIC13.6□□□□□ -0.23
Atxn1P54254 Gm2164-201ENSMUST00000184062 424 ntTSL 2 BASIC13.6□□□□□ -0.23
Atxn1P54254 Gm28942-201ENSMUST00000186334 365 ntTSL 3 BASIC13.6□□□□□ -0.23
Atxn1P54254 2010106C02Rik-201ENSMUST00000191222 660 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Atxn1P54254 Gm43240-201ENSMUST00000198543 630 ntTSL 3 BASIC13.6□□□□□ -0.23
Atxn1P54254 Dera-204ENSMUST00000203216 688 ntTSL 5 BASIC13.6□□□□□ -0.23
Atxn1P54254 Gm45418-202ENSMUST00000210693 649 ntTSL 5 BASIC13.6□□□□□ -0.23
Atxn1P54254 Gstt2-203ENSMUST00000218500 794 ntTSL 5 BASIC13.6□□□□□ -0.23
Atxn1P54254 4930447A16Rik-201ENSMUST00000022897 587 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Atxn1P54254 Lims2-201ENSMUST00000025254 1870 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Atxn1P54254 Lim2-201ENSMUST00000004732 884 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Atxn1P54254 Safb2-201ENSMUST00000075510 3277 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Atxn1P54254 Zfp318-204ENSMUST00000138127 3936 ntAPPRIS ALT2 TSL 5 BASIC13.6□□□□□ -0.23
Atxn1P54254 Orc6-202ENSMUST00000170141 1466 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Atxn1P54254 Map3k5-202ENSMUST00000120259 4289 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Atxn1P54254 Dgke-201ENSMUST00000000285 5208 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Atxn1P54254 Camk1g-204ENSMUST00000169907 1968 ntTSL 5 BASIC13.6□□□□□ -0.23
Atxn1P54254 Txndc11-202ENSMUST00000118362 4248 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Atxn1P54254 Tnn-201ENSMUST00000039178 5817 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Atxn1P54254 Zfp467-205ENSMUST00000114560 3266 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Atxn1P54254 Cdt1-201ENSMUST00000006760 2189 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Atxn1P54254 Gm12846-201ENSMUST00000120431 1373 ntBASIC13.59□□□□□ -0.23
Atxn1P54254 Psmb9-204ENSMUST00000174576 1351 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Atxn1P54254 Vwa5b2-203ENSMUST00000100074 2512 ntAPPRIS P3 TSL 1 (best) BASIC13.59□□□□□ -0.23
Atxn1P54254 Tmem101-201ENSMUST00000021296 1574 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Atxn1P54254 Gm12462-201ENSMUST00000140826 3056 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Atxn1P54254 Wac-201ENSMUST00000074919 3070 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Atxn1P54254 Gm37240-203ENSMUST00000154148 2913 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Atxn1P54254 Spcs2-201ENSMUST00000036274 2909 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Retrieved 100 of 76,532 protein–RNA pairs in 46.8 ms