Protein–RNA interactions for Protein: P52019

Sqle, Squalene monooxygenase, mousemouse

Predictions only

Length 572 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SqleP52019 Tox2-202ENSMUST00000109428 2947 ntAPPRIS ALT2 TSL 5 BASIC14.82□□□□□ -0.04
SqleP52019 Cask-204ENSMUST00000115438 8366 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
SqleP52019 Cpeb3-201ENSMUST00000079754 5899 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
SqleP52019 Cdk2ap1-204ENSMUST00000111474 1286 ntAPPRIS ALT1 TSL 2 BASIC14.82□□□□□ -0.04
SqleP52019 Gm14028-201ENSMUST00000117434 479 ntBASIC14.82□□□□□ -0.04
SqleP52019 Gm15770-201ENSMUST00000117498 584 ntBASIC14.82□□□□□ -0.04
SqleP52019 Gm14277-201ENSMUST00000121195 360 ntBASIC14.82□□□□□ -0.04
SqleP52019 Endov-204ENSMUST00000129327 1184 ntTSL 5 BASIC14.82□□□□□ -0.04
SqleP52019 Gm15979-201ENSMUST00000149741 590 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
SqleP52019 Gm5523-201ENSMUST00000180415 997 ntBASIC14.82□□□□□ -0.04
SqleP52019 Gm3890-201ENSMUST00000182416 207 ntBASIC14.82□□□□□ -0.04
SqleP52019 2010010A06Rik-201ENSMUST00000185628 258 ntBASIC14.82□□□□□ -0.04
SqleP52019 Gm5869-201ENSMUST00000200248 1257 ntBASIC14.82□□□□□ -0.04
SqleP52019 AC158516.1-201ENSMUST00000213921 205 ntTSL 5 BASIC14.82□□□□□ -0.04
SqleP52019 Gm32926-201ENSMUST00000214043 681 ntTSL 3 BASIC14.82□□□□□ -0.04
SqleP52019 AC154595.3-201ENSMUST00000224579 384 ntBASIC14.82□□□□□ -0.04
SqleP52019 Trem3-201ENSMUST00000048065 994 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
SqleP52019 3300002I08Rik-201ENSMUST00000051153 650 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
SqleP52019 Mirlet7c-2-201ENSMUST00000083674 95 ntBASIC14.82□□□□□ -0.04
SqleP52019 Coq7-202ENSMUST00000098090 1215 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
SqleP52019 Zfp606-201ENSMUST00000098822 4748 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
SqleP52019 Aldh3a1-201ENSMUST00000019246 1729 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
SqleP52019 Trim65-201ENSMUST00000067632 3048 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
SqleP52019 9130008F23Rik-201ENSMUST00000068258 2159 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
SqleP52019 Mettl11b-201ENSMUST00000159679 1790 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
SqleP52019 Arhgef10l-206ENSMUST00000105799 4508 ntAPPRIS ALT2 TSL 5 BASIC14.82□□□□□ -0.04
SqleP52019 Asl-205ENSMUST00000161094 1824 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
SqleP52019 Gatad2a-203ENSMUST00000177851 5007 ntAPPRIS ALT2 TSL 5 BASIC14.82□□□□□ -0.04
SqleP52019 Aifm3-202ENSMUST00000115685 2357 ntAPPRIS ALT1 TSL 1 (best) BASIC14.82□□□□□ -0.04
SqleP52019 Tbc1d1-203ENSMUST00000119756 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
SqleP52019 Pld4-201ENSMUST00000063888 1982 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
SqleP52019 Rnaseh2a-203ENSMUST00000109738 2044 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
SqleP52019 Pltp-203ENSMUST00000109317 1575 ntTSL 5 BASIC14.81□□□□□ -0.04
SqleP52019 Mmp21-202ENSMUST00000122136 1599 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
SqleP52019 Mex3c-201ENSMUST00000091852 3738 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
SqleP52019 Gm37305-201ENSMUST00000195714 4279 ntBASIC14.81□□□□□ -0.04
SqleP52019 Cnbp-209ENSMUST00000204890 1614 ntAPPRIS ALT1 TSL 1 (best) BASIC14.81□□□□□ -0.04
SqleP52019 Cd3d-201ENSMUST00000034602 1617 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
SqleP52019 Phospho2-202ENSMUST00000112266 2194 ntAPPRIS P1 TSL 3 BASIC14.81□□□□□ -0.04
SqleP52019 St6gal2-201ENSMUST00000025000 6066 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
SqleP52019 Prdm4-201ENSMUST00000037646 3877 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
SqleP52019 Smarce1-201ENSMUST00000103133 2919 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
SqleP52019 Usp4-201ENSMUST00000035237 3662 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
SqleP52019 Dnmt3b-201ENSMUST00000056495 4318 ntAPPRIS ALT2 TSL 5 BASIC14.81□□□□□ -0.04
SqleP52019 Acss3-201ENSMUST00000044668 2494 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
SqleP52019 Bud23-203ENSMUST00000111205 1169 ntAPPRIS ALT2 TSL 3 BASIC14.81□□□□□ -0.04
SqleP52019 Cab39-202ENSMUST00000113360 3805 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
SqleP52019 Serf1-203ENSMUST00000132053 516 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
SqleP52019 2010320O07Rik-201ENSMUST00000160935 525 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
SqleP52019 Calca-204ENSMUST00000205714 416 ntTSL 2 BASIC14.81□□□□□ -0.04
SqleP52019 Gm38979-201ENSMUST00000207099 698 ntTSL 3 BASIC14.81□□□□□ -0.04
SqleP52019 Ift43-205ENSMUST00000222821 783 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
SqleP52019 Tatdn3-201ENSMUST00000027945 1196 ntAPPRIS ALT2 TSL 3 BASIC14.81□□□□□ -0.04
SqleP52019 Ssc4d-201ENSMUST00000054895 1191 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
SqleP52019 Lrrc32-203ENSMUST00000205956 4576 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
SqleP52019 Ier5-201ENSMUST00000055322 3276 ntAPPRIS P1 BASIC14.81□□□□□ -0.04
SqleP52019 Cnot7-201ENSMUST00000034012 2615 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
SqleP52019 Shroom3-203ENSMUST00000113055 6765 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
SqleP52019 Gm37885-201ENSMUST00000192568 1391 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
SqleP52019 Ptpa-203ENSMUST00000113603 2169 ntTSL 5 BASIC14.81□□□□□ -0.04
SqleP52019 Tgfbr2-202ENSMUST00000061101 8092 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
SqleP52019 Art3-206ENSMUST00000120416 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
SqleP52019 Arhgap8-205ENSMUST00000168811 1464 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
SqleP52019 Inha-201ENSMUST00000037330 1475 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
SqleP52019 Pcdhgc4-203ENSMUST00000195239 2272 ntTSL 3 BASIC14.81□□□□□ -0.04
SqleP52019 Rbfox3-205ENSMUST00000117731 3084 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
SqleP52019 Pccb-201ENSMUST00000035116 2320 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
SqleP52019 Gm15336-201ENSMUST00000128894 1571 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
SqleP52019 Gm42632-201ENSMUST00000201707 2411 ntBASIC14.81□□□□□ -0.04
SqleP52019 4933431E20Rik-209ENSMUST00000146337 1636 ntTSL 5 BASIC14.81□□□□□ -0.04
SqleP52019 Ssr1-204ENSMUST00000225319 1610 ntBASIC14.81□□□□□ -0.04
SqleP52019 Dhx16-201ENSMUST00000025292 3351 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
SqleP52019 Dtd2-201ENSMUST00000021339 2564 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
SqleP52019 Spred1-201ENSMUST00000028829 6016 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
SqleP52019 Tesmin-202ENSMUST00000127142 1714 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
SqleP52019 Arap3-201ENSMUST00000042944 5224 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
SqleP52019 B130055M24Rik-201ENSMUST00000144796 1778 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
SqleP52019 1600002D24Rik-202ENSMUST00000136744 1854 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
SqleP52019 AC115735.4-201ENSMUST00000227460 1944 ntBASIC14.8□□□□□ -0.04
SqleP52019 Sgtb-201ENSMUST00000044385 3048 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
SqleP52019 4931428F04Rik-203ENSMUST00000212219 2044 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
SqleP52019 Zc3h13-203ENSMUST00000227049 6144 ntAPPRIS ALT2 BASIC14.8□□□□□ -0.04
SqleP52019 Fastk-203ENSMUST00000115043 3056 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
SqleP52019 Btaf1-201ENSMUST00000099494 7204 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
SqleP52019 Lrp1-202ENSMUST00000118455 2097 ntTSL 5 BASIC14.8□□□□□ -0.04
SqleP52019 Cdhr5-201ENSMUST00000080654 2133 ntAPPRIS P3 TSL 1 (best) BASIC14.8□□□□□ -0.04
SqleP52019 Sybu-201ENSMUST00000090057 3230 ntAPPRIS P4 TSL 1 (best) BASIC14.8□□□□□ -0.04
SqleP52019 Tchh-201ENSMUST00000064257 5823 ntAPPRIS P1 TSL 5 BASIC14.8□□□□□ -0.04
SqleP52019 Cox4i2-201ENSMUST00000010020 727 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
SqleP52019 1700003G18Rik-201ENSMUST00000140689 633 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
SqleP52019 Arf4os-201ENSMUST00000166902 566 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
SqleP52019 Bloc1s2-ps-201ENSMUST00000183232 432 ntBASIC14.8□□□□□ -0.04
SqleP52019 Mir7032-201ENSMUST00000185154 79 ntBASIC14.8□□□□□ -0.04
SqleP52019 2010310C07Rik-202ENSMUST00000190889 842 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
SqleP52019 Gm44064-201ENSMUST00000204964 1087 ntBASIC14.8□□□□□ -0.04
SqleP52019 Gm8959-201ENSMUST00000213150 571 ntBASIC14.8□□□□□ -0.04
SqleP52019 Id4-201ENSMUST00000021810 3849 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
SqleP52019 Gm5781-201ENSMUST00000219792 443 ntBASIC14.8□□□□□ -0.04
SqleP52019 AC022775.2-201ENSMUST00000227885 646 ntBASIC14.8□□□□□ -0.04
SqleP52019 Rpl18a-201ENSMUST00000054220 1260 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Retrieved 100 of 76,532 protein–RNA pairs in 34.9 ms