Protein–RNA interactions for Protein: P48985

Atoh1, Protein atonal homolog 1, mousemouse

Predictions only

Length 351 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atoh1P48985 Mlx-202ENSMUST00000107302 1826 ntAPPRIS ALT1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Atoh1P48985 6430573F11Rik-205ENSMUST00000171777 1825 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Atoh1P48985 Slc7a7-202ENSMUST00000195970 2057 ntAPPRIS P1 TSL 5 BASIC15.4■□□□□ 0.06
Atoh1P48985 Per1-203ENSMUST00000102605 4537 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
Atoh1P48985 Ggnbp2-213ENSMUST00000172405 2950 ntAPPRIS P2 TSL 1 (best) BASIC15.4■□□□□ 0.06
Atoh1P48985 Gnao1-203ENSMUST00000125716 3462 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Atoh1P48985 Sp8-201ENSMUST00000063918 4478 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Atoh1P48985 Zfp384-208ENSMUST00000112428 3132 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Atoh1P48985 Muc3a-201ENSMUST00000179412 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
Atoh1P48985 Tmem38b-201ENSMUST00000030127 2862 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Atoh1P48985 Camk2b-203ENSMUST00000066431 1603 ntAPPRIS ALT1 TSL 5 BASIC15.4■□□□□ 0.06
Atoh1P48985 Tnfaip8l1-201ENSMUST00000077788 2379 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Atoh1P48985 Shroom3-203ENSMUST00000113055 6765 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Atoh1P48985 Pcgf2-201ENSMUST00000018681 1755 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Atoh1P48985 Map7d1-202ENSMUST00000106132 3195 ntAPPRIS ALT2 TSL 2 BASIC15.4■□□□□ 0.06
Atoh1P48985 1810043G02Rik-202ENSMUST00000105398 899 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
Atoh1P48985 A430005L14Rik-202ENSMUST00000105645 977 ntTSL 3 BASIC15.4■□□□□ 0.06
Atoh1P48985 Upk3bl-202ENSMUST00000111137 1119 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
Atoh1P48985 Pqbp1-203ENSMUST00000115655 1148 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Atoh1P48985 Igf1-206ENSMUST00000122100 651 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Atoh1P48985 Prss41-202ENSMUST00000122936 1088 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
Atoh1P48985 Pdlim2-205ENSMUST00000129174 729 ntTSL 2 BASIC15.4■□□□□ 0.06
Atoh1P48985 Ftl1-ps2-201ENSMUST00000169477 549 ntBASIC15.4■□□□□ 0.06
Atoh1P48985 Gm17111-201ENSMUST00000169981 411 ntTSL 3 BASIC15.4■□□□□ 0.06
Atoh1P48985 Tmem205-202ENSMUST00000178988 862 ntAPPRIS P1 TSL 2 BASIC15.4■□□□□ 0.06
Atoh1P48985 Gm16505-201ENSMUST00000179981 232 ntBASIC15.4■□□□□ 0.06
Atoh1P48985 Gm3890-201ENSMUST00000182416 207 ntBASIC15.4■□□□□ 0.06
Atoh1P48985 Gm2445-201ENSMUST00000182798 989 ntBASIC15.4■□□□□ 0.06
Atoh1P48985 Prr29-204ENSMUST00000188561 592 ntAPPRIS ALT2 TSL 5 BASIC15.4■□□□□ 0.06
Atoh1P48985 Prr29-206ENSMUST00000190795 822 ntTSL 5 BASIC15.4■□□□□ 0.06
Atoh1P48985 Gm44069-201ENSMUST00000204898 506 ntBASIC15.4■□□□□ 0.06
Atoh1P48985 Gm45418-202ENSMUST00000210693 649 ntTSL 5 BASIC15.4■□□□□ 0.06
Atoh1P48985 CT030182.1-201ENSMUST00000225935 533 ntBASIC15.4■□□□□ 0.06
Atoh1P48985 Tatdn3-201ENSMUST00000027945 1196 ntAPPRIS ALT2 TSL 3 BASIC15.4■□□□□ 0.06
Atoh1P48985 Rps3a1-201ENSMUST00000029722 977 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Atoh1P48985 F2r-201ENSMUST00000059193 3336 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Atoh1P48985 Gbp5-201ENSMUST00000090127 3055 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Atoh1P48985 Rbm15-201ENSMUST00000061772 4343 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Atoh1P48985 Axin1-201ENSMUST00000074370 3777 ntAPPRIS P3 TSL 1 (best) BASIC15.39■□□□□ 0.05
Atoh1P48985 Efemp1-201ENSMUST00000020759 2037 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Atoh1P48985 Prkar2b-202ENSMUST00000036497 3378 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Atoh1P48985 Wwox-203ENSMUST00000109108 1771 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Atoh1P48985 Gm45760-201ENSMUST00000212190 1782 ntBASIC15.39■□□□□ 0.05
Atoh1P48985 Fgfr1op2-204ENSMUST00000111663 2880 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Atoh1P48985 Fbxl19-207ENSMUST00000206893 3449 ntAPPRIS ALT2 TSL 5 BASIC15.39■□□□□ 0.05
Atoh1P48985 Tmbim6-201ENSMUST00000023749 2452 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Atoh1P48985 Trim45-203ENSMUST00000106980 3337 ntAPPRIS P3 TSL 1 (best) BASIC15.39■□□□□ 0.05
Atoh1P48985 7420426K07Rik-201ENSMUST00000098460 1504 ntAPPRIS P1 BASIC15.39■□□□□ 0.05
Atoh1P48985 Avpr2-201ENSMUST00000033765 1812 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Atoh1P48985 Uckl1-201ENSMUST00000057816 1849 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Atoh1P48985 Adnp-201ENSMUST00000057793 4917 ntAPPRIS P1 TSL 5 BASIC15.39■□□□□ 0.05
Atoh1P48985 Tomm5-204ENSMUST00000107810 639 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Atoh1P48985 Cntf-201ENSMUST00000112933 1073 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Atoh1P48985 Rps10-203ENSMUST00000114882 614 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Atoh1P48985 Gm14230-202ENSMUST00000137463 874 ntTSL 2 BASIC15.39■□□□□ 0.05
Atoh1P48985 D230022J07Rik-201ENSMUST00000144735 1062 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Atoh1P48985 Pisd-ps1-203ENSMUST00000145164 789 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Atoh1P48985 Usp46os2-201ENSMUST00000152787 831 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Atoh1P48985 Anapc16-202ENSMUST00000182116 581 ntTSL 3 BASIC15.39■□□□□ 0.05
Atoh1P48985 1700034G24Rik-202ENSMUST00000183186 1081 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Atoh1P48985 Gsdmcl-ps-204ENSMUST00000191285 637 ntTSL 3 BASIC15.39■□□□□ 0.05
Atoh1P48985 CT025533.2-201ENSMUST00000228715 1248 ntBASIC15.39■□□□□ 0.05
Atoh1P48985 Olfr686-201ENSMUST00000050157 1018 ntAPPRIS P1 BASIC15.39■□□□□ 0.05
Atoh1P48985 BC049730-201ENSMUST00000051714 1172 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Atoh1P48985 Rpl18a-201ENSMUST00000054220 1260 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Atoh1P48985 Fam71f1-203ENSMUST00000164560 1411 ntAPPRIS P4 TSL 1 (best) BASIC15.39■□□□□ 0.05
Atoh1P48985 Sgk1-202ENSMUST00000092673 2576 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Atoh1P48985 N6amt1-203ENSMUST00000118310 1700 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Atoh1P48985 Tbk1-201ENSMUST00000020316 3024 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Atoh1P48985 Saxo1-201ENSMUST00000030216 1892 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Atoh1P48985 Mmp28-203ENSMUST00000108137 2451 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
Atoh1P48985 Nyap1-204ENSMUST00000212152 2499 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
Atoh1P48985 Rtf1-201ENSMUST00000028767 4664 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Atoh1P48985 Prkab2-201ENSMUST00000045743 5006 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Atoh1P48985 Vwa3b-202ENSMUST00000067178 1769 ntAPPRIS P5 TSL 2 BASIC15.39■□□□□ 0.05
Atoh1P48985 Zfp668-201ENSMUST00000054415 5768 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Atoh1P48985 Cpsf6-206ENSMUST00000176670 2227 ntTSL 5 BASIC15.39■□□□□ 0.05
Atoh1P48985 Cpsf6-207ENSMUST00000176686 2200 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Atoh1P48985 Nrxn1-204ENSMUST00000159778 3414 ntTSL 5 BASIC15.39■□□□□ 0.05
Atoh1P48985 Casp8-201ENSMUST00000027189 2585 ntAPPRIS P3 TSL 1 (best) BASIC15.38■□□□□ 0.05
Atoh1P48985 Trf-201ENSMUST00000035158 2571 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Atoh1P48985 B230319C09Rik-201ENSMUST00000063376 1689 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
Atoh1P48985 Lrrc45-201ENSMUST00000026139 2492 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Atoh1P48985 Dok7-201ENSMUST00000050709 2498 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
Atoh1P48985 Gm13016-201ENSMUST00000126252 1720 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
Atoh1P48985 Fscn2-201ENSMUST00000026445 1713 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Atoh1P48985 Avpr1a-201ENSMUST00000020323 2670 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Atoh1P48985 Gm14608-201ENSMUST00000120030 1553 ntBASIC15.38■□□□□ 0.05
Atoh1P48985 Shank3-202ENSMUST00000066545 4702 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
Atoh1P48985 Rnf114-202ENSMUST00000109214 3001 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Atoh1P48985 Chd1l-201ENSMUST00000029730 3008 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Atoh1P48985 Pin4-201ENSMUST00000113627 489 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Atoh1P48985 Gm16202-201ENSMUST00000117532 544 ntBASIC15.38■□□□□ 0.05
Atoh1P48985 Gm12176-201ENSMUST00000121420 875 ntBASIC15.38■□□□□ 0.05
Atoh1P48985 Gm14019-201ENSMUST00000131514 403 ntTSL 3 BASIC15.38■□□□□ 0.05
Atoh1P48985 Gm16302-201ENSMUST00000159268 428 ntTSL 3 BASIC15.38■□□□□ 0.05
Atoh1P48985 Gm27017-201ENSMUST00000183031 656 ntTSL 3 BASIC15.38■□□□□ 0.05
Atoh1P48985 Pbx2-205ENSMUST00000183827 1186 ntTSL 5 BASIC15.38■□□□□ 0.05
Atoh1P48985 1810059H22Rik-208ENSMUST00000204941 642 ntTSL 2 BASIC15.38■□□□□ 0.05
Atoh1P48985 Ldha-213ENSMUST00000210631 685 ntTSL 5 BASIC15.38■□□□□ 0.05
Retrieved 100 of 76,532 protein–RNA pairs in 41 ms