Protein–RNA interactions for Protein: P40201

Chd1, Chromodomain-helicase-DNA-binding protein 1, mousemouse

Predictions only

Length 1,711 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chd1P40201 Gm13124-201ENSMUST00000105748 1221 ntAPPRIS P1 TSL 5 BASIC20.13■□□□□ 0.81
Chd1P40201 Limd2-203ENSMUST00000106875 936 ntAPPRIS P1 TSL 3 BASIC20.13■□□□□ 0.81
Chd1P40201 Gm12795-201ENSMUST00000117594 539 ntBASIC20.13■□□□□ 0.81
Chd1P40201 Ldha-ps2-201ENSMUST00000118722 1057 ntBASIC20.13■□□□□ 0.81
Chd1P40201 Gm14832-201ENSMUST00000121289 322 ntBASIC20.13■□□□□ 0.81
Chd1P40201 9430091E24Rik-201ENSMUST00000127301 1067 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
Chd1P40201 Gm15966-201ENSMUST00000136853 480 ntTSL 3 BASIC20.13■□□□□ 0.81
Chd1P40201 AC159205.5-202ENSMUST00000224849 386 ntBASIC20.13■□□□□ 0.81
Chd1P40201 AC167013.1-201ENSMUST00000228592 202 ntBASIC20.13■□□□□ 0.81
Chd1P40201 Nop10-201ENSMUST00000028553 1109 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Chd1P40201 2310002L09Rik-201ENSMUST00000030101 958 ntAPPRIS P3 TSL 1 (best) BASIC20.13■□□□□ 0.81
Chd1P40201 Plcl2-201ENSMUST00000043938 4050 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Chd1P40201 Tbata-201ENSMUST00000035894 1506 ntAPPRIS P3 TSL 5 BASIC20.13■□□□□ 0.81
Chd1P40201 Cyp4x1-201ENSMUST00000051400 1524 ntAPPRIS P2 TSL 1 (best) BASIC20.13■□□□□ 0.81
Chd1P40201 Ramp1-201ENSMUST00000097648 2325 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Chd1P40201 Rxrg-204ENSMUST00000111386 1705 ntAPPRIS P1 TSL 5 BASIC20.13■□□□□ 0.81
Chd1P40201 Mmp28-203ENSMUST00000108137 2451 ntAPPRIS ALT2 TSL 1 (best) BASIC20.13■□□□□ 0.81
Chd1P40201 Srpx-201ENSMUST00000044789 2477 ntAPPRIS P2 TSL 1 (best) BASIC20.13■□□□□ 0.81
Chd1P40201 Gm13812-201ENSMUST00000118061 1347 ntBASIC20.13■□□□□ 0.81
Chd1P40201 Gm13810-201ENSMUST00000118584 1347 ntBASIC20.13■□□□□ 0.81
Chd1P40201 Tmem200c-201ENSMUST00000178545 3213 ntAPPRIS P1 TSL 2 BASIC20.13■□□□□ 0.81
Chd1P40201 Txn2-203ENSMUST00000109747 1778 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
Chd1P40201 Cldn18-202ENSMUST00000112882 1750 ntAPPRIS ALT1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Chd1P40201 Slc25a5-ps-202ENSMUST00000223716 1786 ntBASIC20.13■□□□□ 0.81
Chd1P40201 Lgals12-203ENSMUST00000159983 2470 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Chd1P40201 Zranb1-202ENSMUST00000106157 5008 ntAPPRIS P2 TSL 5 BASIC20.13■□□□□ 0.81
Chd1P40201 Arhgef17-204ENSMUST00000209041 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC20.13■□□□□ 0.81
Chd1P40201 Lyzl6-202ENSMUST00000107014 802 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Chd1P40201 Sec11a-204ENSMUST00000120285 875 ntTSL 3 BASIC20.13■□□□□ 0.81
Chd1P40201 Gm16397-201ENSMUST00000122201 494 ntBASIC20.13■□□□□ 0.81
Chd1P40201 Gm12690-201ENSMUST00000132108 354 ntTSL 3 BASIC20.13■□□□□ 0.81
Chd1P40201 Bcas3os2-201ENSMUST00000134305 661 ntTSL 5 BASIC20.13■□□□□ 0.81
Chd1P40201 Gm40652-201ENSMUST00000218944 895 ntTSL 5 BASIC20.13■□□□□ 0.81
Chd1P40201 Nceh1-202ENSMUST00000091284 830 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
Chd1P40201 Slc25a25-203ENSMUST00000113307 2541 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Chd1P40201 Zfp202-203ENSMUST00000168832 3329 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
Chd1P40201 Zfp316-201ENSMUST00000051665 3054 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Chd1P40201 Txndc12-201ENSMUST00000030296 1359 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Chd1P40201 Olfr1156-203ENSMUST00000216726 3271 ntAPPRIS P1 TSL 5 BASIC20.12■□□□□ 0.81
Chd1P40201 Gnao1-203ENSMUST00000125716 3462 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Chd1P40201 Adgrv1-206ENSMUST00000128120 1591 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
Chd1P40201 Ppp1r3g-201ENSMUST00000132661 2361 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Chd1P40201 Sertad4-204ENSMUST00000155579 3350 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Chd1P40201 Mapkapk5-204ENSMUST00000111783 1513 ntAPPRIS ALT1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Chd1P40201 Hoxd3os1-202ENSMUST00000139005 1701 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
Chd1P40201 Slc8b1-202ENSMUST00000076051 2661 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
Chd1P40201 Cipc-211ENSMUST00000191463 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC20.12■□□□□ 0.81
Chd1P40201 Gm12058-201ENSMUST00000118614 437 ntBASIC20.12■□□□□ 0.81
Chd1P40201 Gm15852-201ENSMUST00000159701 915 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
Chd1P40201 9530020I12Rik-203ENSMUST00000219371 819 ntTSL 3 BASIC20.12■□□□□ 0.81
Chd1P40201 Cdc42bpb-201ENSMUST00000041965 6714 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Chd1P40201 Wt1-201ENSMUST00000111098 2395 ntTSL 5 BASIC20.12■□□□□ 0.81
Chd1P40201 Clip1-205ENSMUST00000111566 6133 ntAPPRIS P3 TSL 1 (best) BASIC20.12■□□□□ 0.81
Chd1P40201 Gm6580-201ENSMUST00000117504 1357 ntBASIC20.12■□□□□ 0.81
Chd1P40201 Irx3os-203ENSMUST00000133528 1354 ntTSL 5 BASIC20.12■□□□□ 0.81
Chd1P40201 Atp6v0a2-201ENSMUST00000037865 5345 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Chd1P40201 Ncbp2-201ENSMUST00000023460 2070 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Chd1P40201 Disp3-201ENSMUST00000047720 5282 ntAPPRIS P1 TSL 5 BASIC20.11■□□□□ 0.81
Chd1P40201 Agpat3-201ENSMUST00000001240 5980 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Chd1P40201 Actr3-202ENSMUST00000178474 2565 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Chd1P40201 Srsf5-202ENSMUST00000110351 1498 ntAPPRIS ALT2 TSL 1 (best) BASIC20.11■□□□□ 0.81
Chd1P40201 AC122197.2-201ENSMUST00000219196 1635 ntBASIC20.11■□□□□ 0.81
Chd1P40201 Wsb1-201ENSMUST00000017821 2476 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Chd1P40201 Gm11941-201ENSMUST00000119904 610 ntBASIC20.11■□□□□ 0.81
Chd1P40201 Gm8018-201ENSMUST00000173536 789 ntBASIC20.11■□□□□ 0.81
Chd1P40201 Gm28539-201ENSMUST00000190050 2982 ntAPPRIS P1 TSL 5 BASIC20.11■□□□□ 0.81
Chd1P40201 Gm11938-201ENSMUST00000072306 663 ntAPPRIS P1 BASIC20.11■□□□□ 0.81
Chd1P40201 Agap2-201ENSMUST00000039259 5633 ntAPPRIS P2 TSL 1 (best) BASIC20.11■□□□□ 0.81
Chd1P40201 Top1mt-201ENSMUST00000000958 1903 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Chd1P40201 Fbxl12-205ENSMUST00000140702 1555 ntBASIC20.11■□□□□ 0.81
Chd1P40201 6230400D17Rik-201ENSMUST00000180987 1554 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
Chd1P40201 Lsp1-205ENSMUST00000105968 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC20.11■□□□□ 0.81
Chd1P40201 Rtn3-203ENSMUST00000088169 1709 ntTSL 5 BASIC20.11■□□□□ 0.81
Chd1P40201 Srrm1-208ENSMUST00000136342 3152 ntAPPRIS P3 TSL 5 BASIC20.11■□□□□ 0.81
Chd1P40201 Mllt1-201ENSMUST00000025053 3608 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Chd1P40201 Tmed5-202ENSMUST00000061203 2194 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
Chd1P40201 Dirc2-201ENSMUST00000023554 5395 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Chd1P40201 Cacul1-203ENSMUST00000166712 5700 ntAPPRIS ALT2 TSL 5 BASIC20.11■□□□□ 0.81
Chd1P40201 Tm2d3-203ENSMUST00000107495 1003 ntAPPRIS P4 TSL 5 BASIC20.1■□□□□ 0.81
Chd1P40201 Gm12165-201ENSMUST00000117047 342 ntBASIC20.1■□□□□ 0.81
Chd1P40201 Gm6039-201ENSMUST00000121667 1250 ntBASIC20.1■□□□□ 0.81
Chd1P40201 Gm18893-201ENSMUST00000198416 943 ntBASIC20.1■□□□□ 0.81
Chd1P40201 Fetub-201ENSMUST00000023587 1573 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Chd1P40201 Rtp3-201ENSMUST00000084922 1425 ntAPPRIS P1 TSL 5 BASIC20.1■□□□□ 0.81
Chd1P40201 Strap-201ENSMUST00000064910 2650 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Chd1P40201 Dnd1-201ENSMUST00000061522 1451 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Chd1P40201 Nphs1os-201ENSMUST00000152625 1339 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
Chd1P40201 Ier5-201ENSMUST00000055322 3276 ntAPPRIS P1 BASIC20.1■□□□□ 0.81
Chd1P40201 Mycl-201ENSMUST00000030407 3501 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Chd1P40201 Pbx2-203ENSMUST00000173328 1990 ntTSL 2 BASIC20.1■□□□□ 0.81
Chd1P40201 Chn1-209ENSMUST00000166199 3876 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
Chd1P40201 Shbg-201ENSMUST00000005334 1419 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Chd1P40201 Vamp4-203ENSMUST00000132158 2752 ntTSL 3 BASIC20.1■□□□□ 0.81
Chd1P40201 Ahcyl2-204ENSMUST00000115242 5152 ntAPPRIS P3 TSL 1 (best) BASIC20.1■□□□□ 0.81
Chd1P40201 Rpl41-206ENSMUST00000177163 544 ntAPPRIS P2 TSL 1 (best) BASIC20.1■□□□□ 0.81
Chd1P40201 Gm19187-201ENSMUST00000206781 892 ntBASIC20.1■□□□□ 0.81
Chd1P40201 AC025913.2-202ENSMUST00000219248 605 ntTSL 5 BASIC20.1■□□□□ 0.81
Chd1P40201 Gm10312-201ENSMUST00000078515 489 ntBASIC20.1■□□□□ 0.81
Chd1P40201 2410002F23Rik-218ENSMUST00000188382 2301 ntAPPRIS P2 TSL 5 BASIC20.1■□□□□ 0.81
Chd1P40201 Rad54b-202ENSMUST00000095145 2403 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
Retrieved 100 of 76,532 protein–RNA pairs in 44.2 ms