Protein–RNA interactions for Protein: P31240

Pdgfb, Platelet-derived growth factor subunit B, mousemouse

Predictions only

Length 241 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PdgfbP31240 Pcmt1-208ENSMUST00000162606 2757 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
PdgfbP31240 Ica1l-201ENSMUST00000027172 3650 ntAPPRIS P2 TSL 1 (best) BASIC13.66□□□□□ -0.22
PdgfbP31240 Gm37885-201ENSMUST00000192568 1391 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
PdgfbP31240 Mocs1-201ENSMUST00000024797 2646 ntTSL 5 BASIC13.66□□□□□ -0.22
PdgfbP31240 Cpeb2-205ENSMUST00000169035 7050 ntAPPRIS P2 TSL 5 BASIC13.66□□□□□ -0.22
PdgfbP31240 Adamts17-201ENSMUST00000098382 6025 ntAPPRIS P2 TSL 5 BASIC13.66□□□□□ -0.22
PdgfbP31240 Gm2694-202ENSMUST00000180806 1452 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
PdgfbP31240 Map7d1-202ENSMUST00000106132 3195 ntAPPRIS ALT2 TSL 2 BASIC13.66□□□□□ -0.22
PdgfbP31240 Cenpl-203ENSMUST00000111620 1910 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
PdgfbP31240 Adal-204ENSMUST00000110665 2356 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
PdgfbP31240 Trappc12-203ENSMUST00000170994 2818 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
PdgfbP31240 Slc25a54-201ENSMUST00000029478 1673 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
PdgfbP31240 Gm29340-201ENSMUST00000188763 3854 ntBASIC13.65□□□□□ -0.22
PdgfbP31240 Eif4g1-201ENSMUST00000044783 5444 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.22
PdgfbP31240 Dpysl5-202ENSMUST00000101442 1309 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
PdgfbP31240 Wt1-202ENSMUST00000111099 2441 ntTSL 5 BASIC13.65□□□□□ -0.22
PdgfbP31240 Ggnbp2-213ENSMUST00000172405 2950 ntAPPRIS P2 TSL 1 (best) BASIC13.65□□□□□ -0.22
PdgfbP31240 St6galnac2-201ENSMUST00000079545 3643 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
PdgfbP31240 Papd4-205ENSMUST00000225868 3081 ntAPPRIS ALT1 BASIC13.65□□□□□ -0.22
PdgfbP31240 Cacna1g-201ENSMUST00000021234 8139 ntAPPRIS ALT2 TSL 5 BASIC13.65□□□□□ -0.22
PdgfbP31240 Fam71f1-203ENSMUST00000164560 1411 ntAPPRIS P4 TSL 1 (best) BASIC13.65□□□□□ -0.22
PdgfbP31240 Wac-216ENSMUST00000171486 1608 ntTSL 5 BASIC13.65□□□□□ -0.22
PdgfbP31240 Cdh11-201ENSMUST00000075190 5647 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
PdgfbP31240 Llgl1-201ENSMUST00000052346 4303 ntAPPRIS P4 TSL 1 (best) BASIC13.65□□□□□ -0.22
PdgfbP31240 Pak2-201ENSMUST00000023467 5741 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
PdgfbP31240 Fscn2-201ENSMUST00000026445 1713 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
PdgfbP31240 Acsl3-201ENSMUST00000035779 3950 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
PdgfbP31240 Ptk7-201ENSMUST00000044442 4255 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
PdgfbP31240 Gm13886-201ENSMUST00000117876 1183 ntBASIC13.65□□□□□ -0.22
PdgfbP31240 Tead1-207ENSMUST00000165036 1248 ntTSL 5 BASIC13.65□□□□□ -0.22
PdgfbP31240 Tead1-212ENSMUST00000171197 1074 ntTSL 5 BASIC13.65□□□□□ -0.22
PdgfbP31240 H2al1g-201ENSMUST00000179859 509 ntAPPRIS P1 BASIC13.65□□□□□ -0.22
PdgfbP31240 Ak6-205ENSMUST00000190729 1184 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
PdgfbP31240 2010320M18Rik-201ENSMUST00000191396 1009 ntBASIC13.65□□□□□ -0.22
PdgfbP31240 Gm37388-201ENSMUST00000193984 429 ntAPPRIS P1 TSL 5 BASIC13.65□□□□□ -0.22
PdgfbP31240 Calca-204ENSMUST00000205714 416 ntTSL 2 BASIC13.65□□□□□ -0.22
PdgfbP31240 Gm39929-201ENSMUST00000209672 693 ntTSL 3 BASIC13.65□□□□□ -0.22
PdgfbP31240 Morn2-202ENSMUST00000227729 656 ntBASIC13.65□□□□□ -0.22
PdgfbP31240 Crabp2-201ENSMUST00000005019 931 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
PdgfbP31240 Zdhhc12-201ENSMUST00000081838 1187 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
PdgfbP31240 Cuedc1-201ENSMUST00000018522 3180 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
PdgfbP31240 Gm16168-201ENSMUST00000161091 1359 ntTSL 3 BASIC13.65□□□□□ -0.22
PdgfbP31240 Prss42-201ENSMUST00000035715 1584 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
PdgfbP31240 Cln3-203ENSMUST00000098036 1571 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
PdgfbP31240 Zkscan17-201ENSMUST00000013262 4064 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
PdgfbP31240 Smarce1-201ENSMUST00000103133 2919 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
PdgfbP31240 Avpr1a-201ENSMUST00000020323 2670 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
PdgfbP31240 Pde1c-203ENSMUST00000164037 3068 ntTSL 1 (best) BASIC13.65□□□□□ -0.23
PdgfbP31240 Csnk2a2-201ENSMUST00000056919 3773 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.23
PdgfbP31240 Eda-206ENSMUST00000113779 4955 ntAPPRIS P3 TSL 1 (best) BASIC13.64□□□□□ -0.23
PdgfbP31240 Dda1-206ENSMUST00000138892 1738 ntTSL 3 BASIC13.64□□□□□ -0.23
PdgfbP31240 Dhdds-204ENSMUST00000105887 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC13.64□□□□□ -0.23
PdgfbP31240 Alas1-201ENSMUST00000074082 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
PdgfbP31240 Plekhn1-201ENSMUST00000105569 3014 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
PdgfbP31240 Cab39-202ENSMUST00000113360 3805 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
PdgfbP31240 Rasal3-204ENSMUST00000135618 3293 ntAPPRIS ALT2 TSL 5 BASIC13.64□□□□□ -0.23
PdgfbP31240 Coch-202ENSMUST00000164782 2681 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
PdgfbP31240 Ebf4-202ENSMUST00000110287 2580 ntAPPRIS ALT2 TSL 5 BASIC13.64□□□□□ -0.23
PdgfbP31240 Ube2d3-208ENSMUST00000197134 2493 ntAPPRIS ALT1 TSL 5 BASIC13.64□□□□□ -0.23
PdgfbP31240 Gm2237-202ENSMUST00000170694 2090 ntAPPRIS P5 TSL 5 BASIC13.64□□□□□ -0.23
PdgfbP31240 Mocs2-208ENSMUST00000166176 1855 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
PdgfbP31240 0610006L08Rik-201ENSMUST00000205326 1589 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
PdgfbP31240 Wdr47-201ENSMUST00000051145 4222 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
PdgfbP31240 Slk-202ENSMUST00000051691 4239 ntAPPRIS P3 TSL 1 (best) BASIC13.64□□□□□ -0.23
PdgfbP31240 Cox4i2-201ENSMUST00000010020 727 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
PdgfbP31240 Birc7-201ENSMUST00000108875 1178 ntAPPRIS P1 TSL 5 BASIC13.64□□□□□ -0.23
PdgfbP31240 Upk3bl-202ENSMUST00000111137 1119 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
PdgfbP31240 Dctn6-203ENSMUST00000118811 934 ntTSL 3 BASIC13.64□□□□□ -0.23
PdgfbP31240 Gm2231-201ENSMUST00000125661 612 ntBASIC13.64□□□□□ -0.23
PdgfbP31240 Gm42791-202ENSMUST00000147473 727 ntAPPRIS P1 TSL 5 BASIC13.64□□□□□ -0.23
PdgfbP31240 Gm2310-201ENSMUST00000179217 1131 ntAPPRIS P1 TSL 5 BASIC13.64□□□□□ -0.23
PdgfbP31240 Olfr1414-202ENSMUST00000189174 1159 ntAPPRIS P1 TSL 3 BASIC13.64□□□□□ -0.23
PdgfbP31240 Fam173b-201ENSMUST00000042702 1164 ntAPPRIS P2 TSL 1 (best) BASIC13.64□□□□□ -0.23
PdgfbP31240 Cdc26-201ENSMUST00000084525 819 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
PdgfbP31240 Gm16519-201ENSMUST00000092011 489 ntAPPRIS P1 BASIC13.64□□□□□ -0.23
PdgfbP31240 Ptprt-202ENSMUST00000109442 7719 ntAPPRIS ALT2 TSL 5 BASIC13.64□□□□□ -0.23
PdgfbP31240 F2rl1-201ENSMUST00000022185 2741 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
PdgfbP31240 Fh1-201ENSMUST00000027810 2636 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
PdgfbP31240 Lurap1-201ENSMUST00000030469 5742 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
PdgfbP31240 Desi2-201ENSMUST00000027783 8802 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
PdgfbP31240 Barhl1-201ENSMUST00000050776 3666 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
PdgfbP31240 4930481A15Rik-201ENSMUST00000128542 2106 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
PdgfbP31240 1700012B07Rik-202ENSMUST00000106674 2035 ntAPPRIS P4 TSL 1 (best) BASIC13.64□□□□□ -0.23
PdgfbP31240 Arhgef10l-206ENSMUST00000105799 4508 ntAPPRIS ALT2 TSL 5 BASIC13.64□□□□□ -0.23
PdgfbP31240 Gm8337-201ENSMUST00000187358 1938 ntBASIC13.64□□□□□ -0.23
PdgfbP31240 Nkx3-1-201ENSMUST00000022646 3195 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
PdgfbP31240 Uckl1-201ENSMUST00000057816 1849 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
PdgfbP31240 Fam102a-201ENSMUST00000048375 4223 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
PdgfbP31240 Vav1-201ENSMUST00000005889 2963 ntAPPRIS P3 TSL 1 (best) BASIC13.64□□□□□ -0.23
PdgfbP31240 Rbmx2-201ENSMUST00000033433 1747 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
PdgfbP31240 Rnf180-201ENSMUST00000069686 1728 ntAPPRIS P2 TSL 5 BASIC13.64□□□□□ -0.23
PdgfbP31240 Arvcf-205ENSMUST00000115614 4698 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
PdgfbP31240 Vill-203ENSMUST00000126251 1411 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
PdgfbP31240 Hykk-201ENSMUST00000039742 5110 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
PdgfbP31240 Igf1-204ENSMUST00000121161 1344 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
PdgfbP31240 Mus81-202ENSMUST00000124334 2067 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
PdgfbP31240 Acot4-201ENSMUST00000021652 6203 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
PdgfbP31240 Tubgcp4-202ENSMUST00000110657 1992 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
PdgfbP31240 Frmd5-207ENSMUST00000138157 4230 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
PdgfbP31240 Nfatc1-204ENSMUST00000170905 4896 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Retrieved 100 of 76,532 protein–RNA pairs in 36.9 ms