Protein–RNA interactions for Protein: P28481

Col2a1, Collagen alpha-1(II) chain, mousemouse

Predictions only

Length 1,487 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col2a1P28481 Adam9-204ENSMUST00000208247 4044 ntAPPRIS P2 TSL 1 (best) BASIC15.36■□□□□ 0.05
Col2a1P28481 Rnf220-202ENSMUST00000094853 1675 ntAPPRIS ALT2 TSL 1 (best) BASIC15.36■□□□□ 0.05
Col2a1P28481 Pdzd4-202ENSMUST00000114438 3625 ntAPPRIS ALT2 TSL 1 (best) BASIC15.36■□□□□ 0.05
Col2a1P28481 Ankrd6-202ENSMUST00000084748 4354 ntAPPRIS ALT2 TSL 5 BASIC15.36■□□□□ 0.05
Col2a1P28481 Grm7-201ENSMUST00000071076 3127 ntAPPRIS ALT1 TSL 5 BASIC15.36■□□□□ 0.05
Col2a1P28481 Tjap1-203ENSMUST00000180283 2368 ntAPPRIS P2 TSL 5 BASIC15.36■□□□□ 0.05
Col2a1P28481 P4ha1-202ENSMUST00000092512 2387 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
Col2a1P28481 Aoc2-202ENSMUST00000107264 2230 ntTSL 5 BASIC15.36■□□□□ 0.05
Col2a1P28481 Gm26770-201ENSMUST00000180586 2237 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
Col2a1P28481 Stx4a-202ENSMUST00000121705 1316 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Col2a1P28481 Gm6203-201ENSMUST00000209575 1342 ntBASIC15.35■□□□□ 0.05
Col2a1P28481 Il17re-202ENSMUST00000058548 2940 ntAPPRIS P2 TSL 1 (best) BASIC15.35■□□□□ 0.05
Col2a1P28481 Fdx1-202ENSMUST00000214013 2759 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Col2a1P28481 Gria4-203ENSMUST00000163309 2338 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Col2a1P28481 5830418P13Rik-201ENSMUST00000143564 2178 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Col2a1P28481 Pelp1-201ENSMUST00000019065 3435 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Col2a1P28481 Cmip-201ENSMUST00000095172 2276 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Col2a1P28481 Gm13786-201ENSMUST00000122371 333 ntBASIC15.35■□□□□ 0.05
Col2a1P28481 1700030C14Rik-201ENSMUST00000139912 756 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Col2a1P28481 Gm16124-201ENSMUST00000146938 516 ntTSL 2 BASIC15.35■□□□□ 0.05
Col2a1P28481 Cd180-203ENSMUST00000170878 842 ntTSL 3 BASIC15.35■□□□□ 0.05
Col2a1P28481 Cd180-205ENSMUST00000172138 518 ntTSL 2 BASIC15.35■□□□□ 0.05
Col2a1P28481 Gm26618-201ENSMUST00000181123 497 ntTSL 2 BASIC15.35■□□□□ 0.05
Col2a1P28481 Gm3890-201ENSMUST00000182416 207 ntBASIC15.35■□□□□ 0.05
Col2a1P28481 Gm4768-201ENSMUST00000206199 686 ntBASIC15.35■□□□□ 0.05
Col2a1P28481 Gm32025-201ENSMUST00000217960 307 ntBASIC15.35■□□□□ 0.05
Col2a1P28481 AC148335.1-201ENSMUST00000218778 818 ntTSL 5 BASIC15.35■□□□□ 0.05
Col2a1P28481 Comt-201ENSMUST00000000335 1178 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Col2a1P28481 Taf1d-201ENSMUST00000034415 1148 ntAPPRIS P3 TSL 1 (best) BASIC15.35■□□□□ 0.05
Col2a1P28481 Dnal4-202ENSMUST00000069877 1011 ntTSL 5 BASIC15.35■□□□□ 0.05
Col2a1P28481 Mdk-203ENSMUST00000090602 714 ntAPPRIS P1 TSL 5 BASIC15.35■□□□□ 0.05
Col2a1P28481 Sptbn4-203ENSMUST00000108363 4724 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Col2a1P28481 Sptbn4-204ENSMUST00000108364 4740 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Col2a1P28481 Fam126a-201ENSMUST00000030849 5659 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Col2a1P28481 Hmga2-201ENSMUST00000072777 3710 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Col2a1P28481 Lgals12-203ENSMUST00000159983 2470 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Col2a1P28481 Triml2-203ENSMUST00000209872 1395 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Col2a1P28481 Ttll5-201ENSMUST00000040179 5081 ntAPPRIS P3 TSL 1 (best) BASIC15.35■□□□□ 0.05
Col2a1P28481 Calr3-201ENSMUST00000019876 1769 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Col2a1P28481 Jade2-201ENSMUST00000020655 6273 ntAPPRIS P2 TSL 1 (best) BASIC15.35■□□□□ 0.05
Col2a1P28481 Gm43697-201ENSMUST00000199637 2581 ntBASIC15.35■□□□□ 0.05
Col2a1P28481 Cux2-201ENSMUST00000086317 5113 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Col2a1P28481 Chrna4-201ENSMUST00000067120 4565 ntAPPRIS P2 TSL 1 (best) BASIC15.35■□□□□ 0.05
Col2a1P28481 Fam169b-202ENSMUST00000125685 2821 ntAPPRIS P2 TSL 1 (best) BASIC15.35■□□□□ 0.05
Col2a1P28481 Scin-202ENSMUST00000078481 2654 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Col2a1P28481 Micall2-201ENSMUST00000044642 3346 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Col2a1P28481 Gm21451-201ENSMUST00000111062 2775 ntBASIC15.35■□□□□ 0.05
Col2a1P28481 Edem3-202ENSMUST00000187951 3115 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Col2a1P28481 Ccdc88a-201ENSMUST00000040182 9376 ntAPPRIS P1 TSL 5 BASIC15.35■□□□□ 0.05
Col2a1P28481 Brd7-201ENSMUST00000034085 3625 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Col2a1P28481 Apol6-206ENSMUST00000149569 2315 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
Col2a1P28481 Ndufaf7-201ENSMUST00000024887 2303 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Col2a1P28481 Fbxl12-207ENSMUST00000151861 1668 ntTSL 2 BASIC15.34■□□□□ 0.05
Col2a1P28481 Ank1-209ENSMUST00000121802 8218 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
Col2a1P28481 Cdr2l-201ENSMUST00000053288 3700 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Col2a1P28481 Pfkfb3-212ENSMUST00000170196 2163 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Col2a1P28481 Trim45-203ENSMUST00000106980 3337 ntAPPRIS P3 TSL 1 (best) BASIC15.34■□□□□ 0.05
Col2a1P28481 9230102O04Rik-201ENSMUST00000114915 528 ntAPPRIS P1 TSL 2 BASIC15.34■□□□□ 0.05
Col2a1P28481 Gm9431-201ENSMUST00000119765 1051 ntBASIC15.34■□□□□ 0.05
Col2a1P28481 Gm12167-201ENSMUST00000148132 578 ntTSL 2 BASIC15.34■□□□□ 0.05
Col2a1P28481 Olfr284-202ENSMUST00000206647 966 ntBASIC15.34■□□□□ 0.05
Col2a1P28481 AC158516.1-201ENSMUST00000213921 205 ntTSL 5 BASIC15.34■□□□□ 0.05
Col2a1P28481 Tpd52l1-205ENSMUST00000215515 857 ntTSL 2 BASIC15.34■□□□□ 0.05
Col2a1P28481 Gm45930-201ENSMUST00000221330 292 ntBASIC15.34■□□□□ 0.05
Col2a1P28481 AC140406.1-201ENSMUST00000226481 465 ntBASIC15.34■□□□□ 0.05
Col2a1P28481 Zbtb7b-204ENSMUST00000107435 4333 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Col2a1P28481 Cmpk1-201ENSMUST00000030491 3170 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Col2a1P28481 Zfp318-204ENSMUST00000138127 3936 ntAPPRIS ALT2 TSL 5 BASIC15.34■□□□□ 0.05
Col2a1P28481 Ankrd23-202ENSMUST00000193083 2277 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Col2a1P28481 Sqle-201ENSMUST00000022977 2758 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Col2a1P28481 Sptlc1-201ENSMUST00000021920 2606 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Col2a1P28481 Hsd17b6-201ENSMUST00000026462 1392 ntAPPRIS P1 TSL 5 BASIC15.34■□□□□ 0.05
Col2a1P28481 Tcf3-205ENSMUST00000105341 2451 ntAPPRIS ALT2 TSL 5 BASIC15.34■□□□□ 0.05
Col2a1P28481 Gm16244-201ENSMUST00000159313 2327 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Col2a1P28481 Ralyl-206ENSMUST00000193117 2933 ntAPPRIS P1 TSL 2 BASIC15.34■□□□□ 0.05
Col2a1P28481 Tapt1-201ENSMUST00000055128 3513 ntAPPRIS P1 TSL 5 BASIC15.34■□□□□ 0.05
Col2a1P28481 Mtm1-201ENSMUST00000025391 3286 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Col2a1P28481 Fermt2-201ENSMUST00000045905 3293 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Col2a1P28481 Gm5106-201ENSMUST00000181058 1334 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Col2a1P28481 Gpr4-201ENSMUST00000060225 2882 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Col2a1P28481 Lnx1-205ENSMUST00000117525 2259 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Col2a1P28481 Lrrc14-210ENSMUST00000155735 2286 ntAPPRIS P1 TSL 5 BASIC15.34■□□□□ 0.05
Col2a1P28481 Arhgef1-203ENSMUST00000117419 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
Col2a1P28481 Mrs2-201ENSMUST00000021772 7035 ntAPPRIS P1 TSL 5 BASIC15.34■□□□□ 0.05
Col2a1P28481 Slc25a14-201ENSMUST00000033431 1760 ntAPPRIS P3 TSL 1 (best) BASIC15.34■□□□□ 0.05
Col2a1P28481 Bhlhe41-201ENSMUST00000032386 6133 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Col2a1P28481 AI839979-202ENSMUST00000201790 1539 ntTSL 2 BASIC15.34■□□□□ 0.05
Col2a1P28481 Litaf-201ENSMUST00000023143 2235 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Col2a1P28481 Acot6-201ENSMUST00000056822 3388 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Col2a1P28481 Gm12626-201ENSMUST00000117339 1983 ntBASIC15.33■□□□□ 0.05
Col2a1P28481 Gm12623-201ENSMUST00000119849 1983 ntBASIC15.33■□□□□ 0.05
Col2a1P28481 6330537M06Rik-201ENSMUST00000212384 1642 ntBASIC15.33■□□□□ 0.05
Col2a1P28481 Gm14723-201ENSMUST00000118686 215 ntBASIC15.33■□□□□ 0.05
Col2a1P28481 Ablim2-213ENSMUST00000150146 415 ntTSL 2 BASIC15.33■□□□□ 0.05
Col2a1P28481 Gm12349-201ENSMUST00000153030 657 ntTSL 3 BASIC15.33■□□□□ 0.05
Col2a1P28481 Gm24548-201ENSMUST00000158650 108 ntBASIC15.33■□□□□ 0.05
Col2a1P28481 Gm43403-202ENSMUST00000198830 370 ntTSL 3 BASIC15.33■□□□□ 0.05
Col2a1P28481 Il15-202ENSMUST00000209363 1251 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
Col2a1P28481 Nsmce1-201ENSMUST00000033006 1120 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
Col2a1P28481 Vmn1r213-201ENSMUST00000076897 1155 ntAPPRIS P2 BASIC15.33■□□□□ 0.05
Retrieved 100 of 76,532 protein–RNA pairs in 42.3 ms