Protein–RNA interactions for Protein: P11087

Col1a1, Collagen alpha-1(I) chain, mousemouse

Predictions only

Length 1,453 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col1a1P11087 Etfrf1-207ENSMUST00000111726 1374 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Col1a1P11087 Tpk1-201ENSMUST00000067888 2671 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Col1a1P11087 Tmem19-206ENSMUST00000218731 1346 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
Col1a1P11087 Pde3b-201ENSMUST00000032909 6573 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Col1a1P11087 1500011K16Rik-201ENSMUST00000135091 800 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Col1a1P11087 1700003G18Rik-201ENSMUST00000140689 633 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
Col1a1P11087 Gm26185-201ENSMUST00000157692 266 ntBASIC15.85■□□□□ 0.13
Col1a1P11087 Tmem205-202ENSMUST00000178988 862 ntAPPRIS P1 TSL 2 BASIC15.85■□□□□ 0.13
Col1a1P11087 Olfr1414-202ENSMUST00000189174 1159 ntAPPRIS P1 TSL 3 BASIC15.85■□□□□ 0.13
Col1a1P11087 Rpl30-201ENSMUST00000009039 570 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Col1a1P11087 Cux1-212ENSMUST00000176778 5520 ntAPPRIS ALT2 TSL 5 BASIC15.85■□□□□ 0.13
Col1a1P11087 Sidt2-201ENSMUST00000038488 4248 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Col1a1P11087 Papd7-201ENSMUST00000044081 3994 ntAPPRIS P2 TSL 1 (best) BASIC15.85■□□□□ 0.13
Col1a1P11087 Ofd1-201ENSMUST00000049501 4453 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Col1a1P11087 Gm29455-201ENSMUST00000186504 2659 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
Col1a1P11087 Edem3-202ENSMUST00000187951 3115 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
Col1a1P11087 C77080-201ENSMUST00000052602 5187 ntAPPRIS P3 TSL 1 (best) BASIC15.85■□□□□ 0.13
Col1a1P11087 Dr1-201ENSMUST00000031190 3085 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Col1a1P11087 Ccdc134-201ENSMUST00000089174 2043 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Col1a1P11087 Slc22a13b-ps-201ENSMUST00000173185 1458 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Col1a1P11087 Hsd3b3-203ENSMUST00000107018 1443 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
Col1a1P11087 Slc39a8-202ENSMUST00000081978 3314 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Col1a1P11087 Rspry1-207ENSMUST00000212729 2800 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
Col1a1P11087 Bcor-204ENSMUST00000115513 6941 ntAPPRIS ALT2 TSL 1 (best) BASIC15.85■□□□□ 0.13
Col1a1P11087 Mmp14-206ENSMUST00000225641 3238 ntBASIC15.85■□□□□ 0.13
Col1a1P11087 Gm43650-201ENSMUST00000197337 1382 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
Col1a1P11087 Gm30214-201ENSMUST00000199271 1383 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
Col1a1P11087 Hsd17b6-201ENSMUST00000026462 1392 ntAPPRIS P1 TSL 5 BASIC15.85■□□□□ 0.13
Col1a1P11087 Rbm8a2-201ENSMUST00000104983 1338 ntAPPRIS P1 BASIC15.85■□□□□ 0.13
Col1a1P11087 Ccdc13-202ENSMUST00000135986 2640 ntAPPRIS P1 TSL 5 BASIC15.85■□□□□ 0.13
Col1a1P11087 Pax7-202ENSMUST00000174681 1725 ntAPPRIS ALT1 TSL 5 BASIC15.85■□□□□ 0.13
Col1a1P11087 Prdm4-201ENSMUST00000037646 3877 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Col1a1P11087 Gm24830-201ENSMUST00000102024 166 ntBASIC15.84■□□□□ 0.13
Col1a1P11087 Styxl1-205ENSMUST00000111164 1243 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Col1a1P11087 Rps10-203ENSMUST00000114882 614 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Col1a1P11087 Thoc6-203ENSMUST00000115489 1083 ntTSL 5 BASIC15.84■□□□□ 0.13
Col1a1P11087 Gm8805-201ENSMUST00000117848 313 ntBASIC15.84■□□□□ 0.13
Col1a1P11087 Gm25890-201ENSMUST00000177643 165 ntBASIC15.84■□□□□ 0.13
Col1a1P11087 Rnu1b2-201ENSMUST00000178073 165 ntBASIC15.84■□□□□ 0.13
Col1a1P11087 Rnu1b1-201ENSMUST00000178250 165 ntBASIC15.84■□□□□ 0.13
Col1a1P11087 Gm22614-201ENSMUST00000178300 165 ntBASIC15.84■□□□□ 0.13
Col1a1P11087 Gm16505-201ENSMUST00000179981 232 ntBASIC15.84■□□□□ 0.13
Col1a1P11087 Gm45022-201ENSMUST00000208332 545 ntTSL 5 BASIC15.84■□□□□ 0.13
Col1a1P11087 Caly-204ENSMUST00000211283 975 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Col1a1P11087 Morn3-201ENSMUST00000031437 1128 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Col1a1P11087 Fgl1-201ENSMUST00000034003 1120 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Col1a1P11087 Gm22042-201ENSMUST00000082989 165 ntBASIC15.84■□□□□ 0.13
Col1a1P11087 Gm26232-201ENSMUST00000083360 166 ntBASIC15.84■□□□□ 0.13
Col1a1P11087 Gm24136-201ENSMUST00000083374 165 ntBASIC15.84■□□□□ 0.13
Col1a1P11087 Rnu1b6-201ENSMUST00000083839 166 ntBASIC15.84■□□□□ 0.13
Col1a1P11087 Gm26110-201ENSMUST00000083971 165 ntBASIC15.84■□□□□ 0.13
Col1a1P11087 Cbx3-ps1-201ENSMUST00000091539 545 ntBASIC15.84■□□□□ 0.13
Col1a1P11087 Ankrd17-203ENSMUST00000168058 9311 ntAPPRIS ALT2 TSL 5 BASIC15.84■□□□□ 0.13
Col1a1P11087 Fstl1-201ENSMUST00000114763 3789 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Col1a1P11087 Axin1-201ENSMUST00000074370 3777 ntAPPRIS P3 TSL 1 (best) BASIC15.84■□□□□ 0.13
Col1a1P11087 Jade2-201ENSMUST00000020655 6273 ntAPPRIS P2 TSL 1 (best) BASIC15.84■□□□□ 0.13
Col1a1P11087 Col9a2-201ENSMUST00000030372 2924 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Col1a1P11087 Ace-201ENSMUST00000001963 4906 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Col1a1P11087 Gm6015-201ENSMUST00000217493 1586 ntBASIC15.84■□□□□ 0.13
Col1a1P11087 Klhl26-202ENSMUST00000166976 2734 ntTSL 2 BASIC15.84■□□□□ 0.13
Col1a1P11087 Knop1-205ENSMUST00000116280 5382 ntAPPRIS P3 TSL 5 BASIC15.84■□□□□ 0.13
Col1a1P11087 Sh3bp5-201ENSMUST00000091903 2684 ntAPPRIS P3 TSL 1 (best) BASIC15.84■□□□□ 0.13
Col1a1P11087 Klc1-203ENSMUST00000120544 2261 ntAPPRIS ALT1 TSL 5 BASIC15.84■□□□□ 0.13
Col1a1P11087 Gata4-202ENSMUST00000118022 3374 ntAPPRIS P3 TSL 1 (best) BASIC15.84■□□□□ 0.13
Col1a1P11087 Sybu-209ENSMUST00000228639 4113 ntBASIC15.84■□□□□ 0.13
Col1a1P11087 A930033H14Rik-201ENSMUST00000170048 2969 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Col1a1P11087 Oasl1-202ENSMUST00000112143 2181 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Col1a1P11087 Traf2-201ENSMUST00000028311 3044 ntAPPRIS P3 TSL 1 (best) BASIC15.84■□□□□ 0.13
Col1a1P11087 Pacs1-201ENSMUST00000025786 4339 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Col1a1P11087 Myh10-204ENSMUST00000108673 1315 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
Col1a1P11087 Slc8a3-202ENSMUST00000085238 4927 ntAPPRIS ALT1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Col1a1P11087 Rpl15-203ENSMUST00000100799 802 ntAPPRIS P1 TSL 2 BASIC15.84■□□□□ 0.13
Col1a1P11087 Tspan4-202ENSMUST00000117634 1281 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Col1a1P11087 Gm15829-201ENSMUST00000145415 869 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
Col1a1P11087 Gm2310-201ENSMUST00000179217 1131 ntAPPRIS P1 TSL 5 BASIC15.84■□□□□ 0.13
Col1a1P11087 Anapc16-205ENSMUST00000182912 566 ntTSL 2 BASIC15.84■□□□□ 0.13
Col1a1P11087 Gm37042-201ENSMUST00000193816 581 ntBASIC15.84■□□□□ 0.13
Col1a1P11087 Gm42797-201ENSMUST00000197573 494 ntTSL 3 BASIC15.84■□□□□ 0.13
Col1a1P11087 Gm45418-202ENSMUST00000210693 649 ntTSL 5 BASIC15.84■□□□□ 0.13
Col1a1P11087 CT025533.2-201ENSMUST00000228715 1248 ntBASIC15.84■□□□□ 0.13
Col1a1P11087 Fam96a-201ENSMUST00000034945 1240 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Col1a1P11087 Fmr1nb-202ENSMUST00000071848 842 ntAPPRIS P3 TSL 1 (best) BASIC15.84■□□□□ 0.13
Col1a1P11087 Epsti1-201ENSMUST00000022591 1870 ntAPPRIS P2 TSL 1 (best) BASIC15.84■□□□□ 0.13
Col1a1P11087 9130017K11Rik-202ENSMUST00000135670 3338 ntTSL 1 (best) BASIC15.83■□□□□ 0.13
Col1a1P11087 Mapk7-202ENSMUST00000101085 3254 ntTSL 1 (best) BASIC15.83■□□□□ 0.13
Col1a1P11087 Eno1b-201ENSMUST00000076155 1757 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
Col1a1P11087 Usp49-201ENSMUST00000024779 8252 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
Col1a1P11087 Gm43289-201ENSMUST00000200537 1475 ntBASIC15.83■□□□□ 0.13
Col1a1P11087 Ank1-209ENSMUST00000121802 8218 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.13
Col1a1P11087 Otop2-201ENSMUST00000055490 2335 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
Col1a1P11087 Hic1-201ENSMUST00000055619 3497 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
Col1a1P11087 Gjd2-201ENSMUST00000090275 2879 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
Col1a1P11087 Alk-201ENSMUST00000086639 4866 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
Col1a1P11087 Gm43697-201ENSMUST00000199637 2581 ntBASIC15.83■□□□□ 0.12
Col1a1P11087 Slc25a22-202ENSMUST00000106006 2277 ntTSL 5 BASIC15.83■□□□□ 0.12
Col1a1P11087 Gm26565-201ENSMUST00000181642 1968 ntTSL 5 BASIC15.83■□□□□ 0.12
Col1a1P11087 Cyth2-208ENSMUST00000211783 1983 ntTSL 5 BASIC15.83■□□□□ 0.12
Col1a1P11087 E230013L22Rik-201ENSMUST00000180408 1856 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
Col1a1P11087 Nkx6-1-201ENSMUST00000044125 3138 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Col1a1P11087 Iqsec2-202ENSMUST00000112604 5967 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.12
Retrieved 100 of 76,532 protein–RNA pairs in 37.2 ms