Protein–RNA interactions for Protein: O88704

Hcn1, Potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 1, mousemouse

Predictions only

Length 910 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hcn1O88704 Lcn6-202ENSMUST00000114197 635 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Hcn1O88704 Mir1897-201ENSMUST00000122581 272 ntBASIC13.18□□□□□ -0.3
Hcn1O88704 Atcayos-202ENSMUST00000129950 1117 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Hcn1O88704 Gpx4-207ENSMUST00000183037 735 ntTSL 2 BASIC13.18□□□□□ -0.3
Hcn1O88704 Lsamp-207ENSMUST00000189229 637 ntTSL 3 BASIC13.18□□□□□ -0.3
Hcn1O88704 Lsamp-210ENSMUST00000191610 1297 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Hcn1O88704 AA619741-201ENSMUST00000195095 646 ntBASIC13.18□□□□□ -0.3
Hcn1O88704 Gm42787-201ENSMUST00000200879 1164 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Hcn1O88704 Syce1l-201ENSMUST00000034219 896 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Hcn1O88704 Gstp2-201ENSMUST00000042700 770 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Hcn1O88704 Ucn-201ENSMUST00000043475 504 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Hcn1O88704 Hist1h3f-201ENSMUST00000075558 1261 ntAPPRIS P1 BASIC13.18□□□□□ -0.3
Hcn1O88704 Mir125a-201ENSMUST00000083545 68 ntBASIC13.18□□□□□ -0.3
Hcn1O88704 Casp16-ps-201ENSMUST00000088673 531 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
Hcn1O88704 Klf4-201ENSMUST00000107619 3029 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Hcn1O88704 Prok2-202ENSMUST00000032152 1423 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Hcn1O88704 Slc5a11-201ENSMUST00000033035 2396 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Hcn1O88704 Oxa1l-201ENSMUST00000000985 2538 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Hcn1O88704 G3bp2-209ENSMUST00000202258 1884 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
Hcn1O88704 Cit-203ENSMUST00000112008 6087 ntAPPRIS ALT2 TSL 5 BASIC13.18□□□□□ -0.3
Hcn1O88704 Slc41a3-201ENSMUST00000032177 2324 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Hcn1O88704 Src-202ENSMUST00000092576 3887 ntTSL 5 BASIC13.18□□□□□ -0.3
Hcn1O88704 Taf1c-201ENSMUST00000093099 3236 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Hcn1O88704 Tmem200a-201ENSMUST00000066049 4115 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Hcn1O88704 Gm5763-201ENSMUST00000155951 1530 ntBASIC13.18□□□□□ -0.3
Hcn1O88704 Trf-201ENSMUST00000035158 2571 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Hcn1O88704 Ispd-205ENSMUST00000221895 4022 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Hcn1O88704 Apln-201ENSMUST00000039026 3149 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Hcn1O88704 Arf2-201ENSMUST00000057921 2242 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Hcn1O88704 Ikzf4-201ENSMUST00000133342 5150 ntAPPRIS P1 TSL 2 BASIC13.17□□□□□ -0.3
Hcn1O88704 Rnf25-201ENSMUST00000027357 1479 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
Hcn1O88704 Prss22-201ENSMUST00000041649 1323 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Hcn1O88704 Supt6-201ENSMUST00000002121 6488 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Hcn1O88704 Fam122b-203ENSMUST00000114841 3074 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Hcn1O88704 Pde10a-202ENSMUST00000089085 7717 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
Hcn1O88704 Leo1-201ENSMUST00000048937 2180 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Hcn1O88704 Casc4-202ENSMUST00000089912 3602 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Hcn1O88704 Hspa8-202ENSMUST00000117557 2019 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Hcn1O88704 Keap1-205ENSMUST00000194542 3151 ntAPPRIS P2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Hcn1O88704 Phgdh-201ENSMUST00000065793 1893 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Hcn1O88704 Secisbp2l-201ENSMUST00000053699 6797 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Hcn1O88704 Gm13288-201ENSMUST00000094977 2850 ntAPPRIS P1 BASIC13.17□□□□□ -0.3
Hcn1O88704 Gm45751-201ENSMUST00000210185 1573 ntBASIC13.17□□□□□ -0.3
Hcn1O88704 Sirt3-202ENSMUST00000106048 1416 ntAPPRIS P2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Hcn1O88704 Dap3-207ENSMUST00000173135 1409 ntAPPRIS ALT2 TSL 5 BASIC13.17□□□□□ -0.3
Hcn1O88704 Chfr-201ENSMUST00000014812 3146 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
Hcn1O88704 Tbr1-201ENSMUST00000048934 3977 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Hcn1O88704 Gm15653-201ENSMUST00000119247 907 ntBASIC13.17□□□□□ -0.3
Hcn1O88704 Gm12428-201ENSMUST00000119844 727 ntBASIC13.17□□□□□ -0.3
Hcn1O88704 Gm26839-201ENSMUST00000180686 842 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Hcn1O88704 Erp27-201ENSMUST00000032343 1029 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Hcn1O88704 Hes5-201ENSMUST00000049621 1273 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Hcn1O88704 Lgals8-203ENSMUST00000124888 2843 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Hcn1O88704 Sntb1-201ENSMUST00000039769 4919 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Hcn1O88704 Rad17-202ENSMUST00000177848 2392 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Hcn1O88704 Luc7l3-202ENSMUST00000107820 3478 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
Hcn1O88704 BC001981-202ENSMUST00000191393 1545 ntBASIC13.17□□□□□ -0.3
Hcn1O88704 Arhgap28-201ENSMUST00000024840 5322 ntAPPRIS P2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Hcn1O88704 Tmem2-202ENSMUST00000096194 6667 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
Hcn1O88704 5830418P13Rik-201ENSMUST00000143564 2178 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Hcn1O88704 Klhl15-201ENSMUST00000096369 3944 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Hcn1O88704 Cacna1g-207ENSMUST00000107789 8383 ntAPPRIS ALT2 TSL 5 BASIC13.17□□□□□ -0.3
Hcn1O88704 Ttc8-202ENSMUST00000085109 2272 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Hcn1O88704 Tmem8b-202ENSMUST00000107865 4775 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Hcn1O88704 Zyx-202ENSMUST00000164375 3188 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
Hcn1O88704 Larp1b-205ENSMUST00000191805 1581 ntAPPRIS P2 TSL 5 BASIC13.16□□□□□ -0.3
Hcn1O88704 Plcd1-203ENSMUST00000214470 2706 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Hcn1O88704 Gm38102-201ENSMUST00000192791 1935 ntBASIC13.16□□□□□ -0.3
Hcn1O88704 Hif1a-201ENSMUST00000021530 4724 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
Hcn1O88704 Gm20632-201ENSMUST00000176760 2427 ntBASIC13.16□□□□□ -0.3
Hcn1O88704 Arfrp1-202ENSMUST00000108808 1133 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Hcn1O88704 Lamtor2-202ENSMUST00000119002 568 ntTSL 2 BASIC13.16□□□□□ -0.3
Hcn1O88704 Gm12151-201ENSMUST00000121374 290 ntBASIC13.16□□□□□ -0.3
Hcn1O88704 1700007J10Rik-202ENSMUST00000153431 1111 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Hcn1O88704 Tgfb1i1-203ENSMUST00000163609 1053 ntTSL 5 BASIC13.16□□□□□ -0.3
Hcn1O88704 Wdr45-225ENSMUST00000208443 1172 ntTSL 5 BASIC13.16□□□□□ -0.3
Hcn1O88704 Gm39228-201ENSMUST00000212456 301 ntTSL 5 BASIC13.16□□□□□ -0.3
Hcn1O88704 Lyzl6-201ENSMUST00000021328 900 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Hcn1O88704 Gm9063-201ENSMUST00000223299 582 ntBASIC13.16□□□□□ -0.3
Hcn1O88704 AC121598.1-201ENSMUST00000228224 1019 ntBASIC13.16□□□□□ -0.3
Hcn1O88704 Bccip-201ENSMUST00000033282 1244 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Hcn1O88704 Rgs9bp-201ENSMUST00000069912 6590 ntAPPRIS P1 BASIC13.16□□□□□ -0.3
Hcn1O88704 BC003331-205ENSMUST00000111913 3273 ntAPPRIS P3 TSL 5 BASIC13.16□□□□□ -0.3
Hcn1O88704 Senp5-201ENSMUST00000023457 3498 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Hcn1O88704 Mief1-201ENSMUST00000023048 5081 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Hcn1O88704 Gm10305-201ENSMUST00000195331 2475 ntBASIC13.16□□□□□ -0.3
Hcn1O88704 Gm13055-201ENSMUST00000127875 1961 ntTSL 5 BASIC13.16□□□□□ -0.3
Hcn1O88704 Gnaz-202ENSMUST00000159991 3331 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Hcn1O88704 1700037C18Rik-202ENSMUST00000115859 2592 ntAPPRIS P2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Hcn1O88704 Otud4-203ENSMUST00000173286 7213 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Hcn1O88704 Pcyox1-201ENSMUST00000032065 4295 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Hcn1O88704 Diaph1-204ENSMUST00000115631 5741 ntAPPRIS ALT2 TSL 5 BASIC13.16□□□□□ -0.3
Hcn1O88704 Fbn1-201ENSMUST00000028633 9847 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Hcn1O88704 Tsku-206ENSMUST00000179780 2404 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Hcn1O88704 Ptbp2-201ENSMUST00000029780 3364 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.3
Hcn1O88704 Phldb1-213ENSMUST00000144251 3589 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Hcn1O88704 Stau1-204ENSMUST00000109238 2976 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Hcn1O88704 Ralgps2-214ENSMUST00000191605 2958 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.3
Hcn1O88704 Kars-202ENSMUST00000093120 2131 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Hcn1O88704 Ly9-202ENSMUST00000068878 2488 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.3
Retrieved 100 of 76,532 protein–RNA pairs in 30.7 ms