Protein–RNA interactions for Protein: O35526

Stx1a, Syntaxin-1A, mousemouse

Predictions only

Length 288 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Stx1aO35526 Rab15-201ENSMUST00000021459 3158 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Stx1aO35526 Pde10a-202ENSMUST00000089085 7717 ntAPPRIS P3 TSL 1 (best) BASIC15.42■□□□□ 0.06
Stx1aO35526 Lnx1-205ENSMUST00000117525 2259 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
Stx1aO35526 Slc39a14-201ENSMUST00000022688 2098 ntAPPRIS ALT2 TSL 1 (best) BASIC15.42■□□□□ 0.06
Stx1aO35526 Pex12-207ENSMUST00000176518 2501 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Stx1aO35526 Xrcc3-201ENSMUST00000021715 2422 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Stx1aO35526 Fermt2-201ENSMUST00000045905 3293 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Stx1aO35526 Sebox-201ENSMUST00000001130 1351 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Stx1aO35526 Mapk8ip3-206ENSMUST00000120035 4125 ntAPPRIS ALT2 TSL 1 (best) BASIC15.42■□□□□ 0.06
Stx1aO35526 Sbsn-201ENSMUST00000080518 2221 ntAPPRIS P3 TSL 1 (best) BASIC15.42■□□□□ 0.06
Stx1aO35526 Polr3g-201ENSMUST00000048993 3054 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Stx1aO35526 Olfr1564-201ENSMUST00000112162 1091 ntAPPRIS P2 BASIC15.42■□□□□ 0.06
Stx1aO35526 Gm1401-201ENSMUST00000122048 772 ntBASIC15.42■□□□□ 0.06
Stx1aO35526 Gm12260-201ENSMUST00000122447 411 ntBASIC15.42■□□□□ 0.06
Stx1aO35526 Serpinf1-202ENSMUST00000125982 605 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
Stx1aO35526 Gm12786-201ENSMUST00000129617 644 ntTSL 3 BASIC15.42■□□□□ 0.06
Stx1aO35526 Kirrel-203ENSMUST00000159976 7236 ntAPPRIS P2 TSL 1 (best) BASIC15.42■□□□□ 0.06
Stx1aO35526 Smim17-203ENSMUST00000161855 664 ntAPPRIS P1 TSL 3 BASIC15.42■□□□□ 0.06
Stx1aO35526 Gm5628-201ENSMUST00000222318 1049 ntBASIC15.42■□□□□ 0.06
Stx1aO35526 Mzt1-203ENSMUST00000227948 952 ntBASIC15.42■□□□□ 0.06
Stx1aO35526 Ndufc2-201ENSMUST00000032882 683 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Stx1aO35526 Tbcc-201ENSMUST00000040434 1164 ntAPPRIS P1 BASIC15.42■□□□□ 0.06
Stx1aO35526 Zmynd15-202ENSMUST00000092958 2100 ntAPPRIS ALT2 TSL 5 BASIC15.42■□□□□ 0.06
Stx1aO35526 Mir497b-201ENSMUST00000093601 125 ntBASIC15.42■□□□□ 0.06
Stx1aO35526 Tmem41b-201ENSMUST00000094097 3840 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Stx1aO35526 Gm5939-201ENSMUST00000119613 2874 ntBASIC15.42■□□□□ 0.06
Stx1aO35526 Ntm-203ENSMUST00000115237 2039 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Stx1aO35526 Gm996-204ENSMUST00000191602 4812 ntAPPRIS P1 TSL 2 BASIC15.42■□□□□ 0.06
Stx1aO35526 Ssr1-203ENSMUST00000225246 1825 ntBASIC15.42■□□□□ 0.06
Stx1aO35526 Actn4-201ENSMUST00000068045 3877 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Stx1aO35526 Matr3-206ENSMUST00000187389 3107 ntAPPRIS P1 TSL 5 BASIC15.42■□□□□ 0.06
Stx1aO35526 Hhatl-202ENSMUST00000163981 1744 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Stx1aO35526 Acin1-219ENSMUST00000148754 2373 ntAPPRIS ALT2 TSL 5 BASIC15.42■□□□□ 0.06
Stx1aO35526 Pi4kb-201ENSMUST00000072287 3692 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Stx1aO35526 Hnrnpf-203ENSMUST00000167182 2271 ntAPPRIS P1 TSL 3 BASIC15.42■□□□□ 0.06
Stx1aO35526 Ints7-201ENSMUST00000045450 5347 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Stx1aO35526 Chrdl1-203ENSMUST00000112878 4050 ntAPPRIS ALT2 TSL 5 BASIC15.42■□□□□ 0.06
Stx1aO35526 Gm45667-201ENSMUST00000210380 1316 ntBASIC15.42■□□□□ 0.06
Stx1aO35526 Nt5c3b-202ENSMUST00000092689 1344 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
Stx1aO35526 Cnbd2-202ENSMUST00000073942 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
Stx1aO35526 Hmga2-203ENSMUST00000159699 3810 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Stx1aO35526 Adcyap1r1-206ENSMUST00000167234 1575 ntAPPRIS ALT2 TSL 5 BASIC15.41■□□□□ 0.06
Stx1aO35526 Atxn2l-201ENSMUST00000040202 3853 ntAPPRIS P3 TSL 1 (best) BASIC15.41■□□□□ 0.06
Stx1aO35526 Gm12689-201ENSMUST00000094955 1359 ntAPPRIS P1 BASIC15.41■□□□□ 0.06
Stx1aO35526 Zscan22-203ENSMUST00000119989 2087 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Stx1aO35526 Fbxo44-202ENSMUST00000105705 1034 ntTSL 2 BASIC15.41■□□□□ 0.06
Stx1aO35526 Dusp14-203ENSMUST00000108101 1082 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Stx1aO35526 Nudcd2-203ENSMUST00000127382 727 ntTSL 2 BASIC15.41■□□□□ 0.06
Stx1aO35526 Gm11201-201ENSMUST00000143473 701 ntTSL 3 BASIC15.41■□□□□ 0.06
Stx1aO35526 1700110K17Rik-202ENSMUST00000156511 927 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Stx1aO35526 Ccdc24-209ENSMUST00000171052 891 ntAPPRIS P1 TSL 5 BASIC15.41■□□□□ 0.06
Stx1aO35526 4930519L02Rik-201ENSMUST00000197683 619 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Stx1aO35526 Gm31545-201ENSMUST00000209358 1219 ntTSL 5 BASIC15.41■□□□□ 0.06
Stx1aO35526 Gm2270-201ENSMUST00000222858 797 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Stx1aO35526 Commd9-201ENSMUST00000028584 1191 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Stx1aO35526 Ly6g6f-201ENSMUST00000038507 1141 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Stx1aO35526 Sf3b6-201ENSMUST00000046207 1180 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Stx1aO35526 Polr2g-201ENSMUST00000096261 868 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Stx1aO35526 Myc-205ENSMUST00000161976 2338 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Stx1aO35526 Myc-201ENSMUST00000022971 2338 ntAPPRIS ALT1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Stx1aO35526 Mier3-203ENSMUST00000109272 5279 ntAPPRIS P2 TSL 1 (best) BASIC15.41■□□□□ 0.06
Stx1aO35526 Uqcrq-201ENSMUST00000061326 1521 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Stx1aO35526 Caprin1-201ENSMUST00000028607 6169 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Stx1aO35526 Gas7-201ENSMUST00000041611 2968 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
Stx1aO35526 Gm36995-201ENSMUST00000126170 5727 ntTSL 2 BASIC15.41■□□□□ 0.06
Stx1aO35526 Uimc1-202ENSMUST00000099496 1678 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Stx1aO35526 Scg3-202ENSMUST00000213324 2152 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Stx1aO35526 Ccdc125-201ENSMUST00000057325 2413 ntAPPRIS P3 TSL 1 (best) BASIC15.41■□□□□ 0.06
Stx1aO35526 Pigq-209ENSMUST00000140304 1835 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Stx1aO35526 Gm2115-201ENSMUST00000180387 7055 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Stx1aO35526 Gtse1-201ENSMUST00000170629 2721 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Stx1aO35526 Zfp575-201ENSMUST00000094705 2741 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Stx1aO35526 Acsl6-210ENSMUST00000108905 5807 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Stx1aO35526 Ebf1-202ENSMUST00000101326 3422 ntAPPRIS ALT1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Stx1aO35526 Arxes2-201ENSMUST00000058119 1532 ntAPPRIS P1 BASIC15.4■□□□□ 0.06
Stx1aO35526 Tex22-202ENSMUST00000109729 735 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Stx1aO35526 Fis1-203ENSMUST00000111097 601 ntTSL 2 BASIC15.4■□□□□ 0.06
Stx1aO35526 Gm13015-201ENSMUST00000118674 204 ntBASIC15.4■□□□□ 0.06
Stx1aO35526 Gm11745-201ENSMUST00000121669 448 ntBASIC15.4■□□□□ 0.06
Stx1aO35526 Gm16151-201ENSMUST00000129696 639 ntTSL 3 BASIC15.4■□□□□ 0.06
Stx1aO35526 Gm15917-201ENSMUST00000162771 487 ntTSL 2 BASIC15.4■□□□□ 0.06
Stx1aO35526 Fis1-201ENSMUST00000019198 786 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Stx1aO35526 4930513N10Rik-204ENSMUST00000212647 3957 ntBASIC15.4■□□□□ 0.06
Stx1aO35526 Gm3252-201ENSMUST00000165619 1949 ntAPPRIS P1 TSL 5 BASIC15.4■□□□□ 0.06
Stx1aO35526 Bmp4-201ENSMUST00000074077 2064 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Stx1aO35526 Apbb2-203ENSMUST00000159512 6632 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Stx1aO35526 Il11ra1-202ENSMUST00000108040 1837 ntAPPRIS P1 TSL 5 BASIC15.4■□□□□ 0.06
Stx1aO35526 Kdm4b-201ENSMUST00000025036 4577 ntAPPRIS P2 TSL 1 (best) BASIC15.4■□□□□ 0.06
Stx1aO35526 Hoxaas3-202ENSMUST00000136806 2207 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Stx1aO35526 Gm5124-201ENSMUST00000127554 1970 ntTSL 5 BASIC15.4■□□□□ 0.06
Stx1aO35526 Adgrv1-205ENSMUST00000126444 3823 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Stx1aO35526 Foxs1-201ENSMUST00000099200 1311 ntAPPRIS P1 BASIC15.4■□□□□ 0.06
Stx1aO35526 Gm45706-201ENSMUST00000213063 2136 ntBASIC15.4■□□□□ 0.06
Stx1aO35526 Ptpru-203ENSMUST00000105987 5484 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Stx1aO35526 Creb3-201ENSMUST00000102944 1884 ntAPPRIS P2 TSL 1 (best) BASIC15.4■□□□□ 0.06
Stx1aO35526 Efhd1-201ENSMUST00000027472 1854 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Stx1aO35526 Paqr8-202ENSMUST00000167119 1472 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Stx1aO35526 Bbs5-201ENSMUST00000074963 1468 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Stx1aO35526 Slc4a1ap-209ENSMUST00000202214 2806 ntAPPRIS P3 TSL 5 BASIC15.39■□□□□ 0.06
Stx1aO35526 Phka1-203ENSMUST00000113611 6064 ntAPPRIS ALT2 TSL 5 BASIC15.39■□□□□ 0.05
Retrieved 100 of 76,532 protein–RNA pairs in 56.5 ms