Protein–RNA interactions for Protein: O35206

Col15a1, Collagen alpha-1(XV) chain, mousemouse

Predictions only

Length 1,367 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col15a1O35206 Rspry1-207ENSMUST00000212729 2800 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Col15a1O35206 Foxi2-201ENSMUST00000060356 2657 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Col15a1O35206 Tmem56-203ENSMUST00000128909 6696 ntAPPRIS P2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Col15a1O35206 Ncdn-202ENSMUST00000106116 2434 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Col15a1O35206 Gm8994-202ENSMUST00000204530 1573 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Col15a1O35206 St6galnac2-201ENSMUST00000079545 3643 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Col15a1O35206 Syvn1-201ENSMUST00000025723 2780 ntAPPRIS ALT2 TSL 5 BASIC17.4■□□□□ 0.38
Col15a1O35206 Egfl7-201ENSMUST00000100290 1348 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Col15a1O35206 Unc45bos-201ENSMUST00000156395 1306 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Col15a1O35206 Ppp4r3a-202ENSMUST00000163095 4083 ntTSL 5 BASIC17.4■□□□□ 0.38
Col15a1O35206 Rrbp1-201ENSMUST00000016072 5177 ntAPPRIS P4 TSL 5 BASIC17.4■□□□□ 0.38
Col15a1O35206 Herpud1-205ENSMUST00000161576 1952 ntAPPRIS P2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Col15a1O35206 Gm15046-201ENSMUST00000130153 408 ntTSL 3 BASIC17.4■□□□□ 0.38
Col15a1O35206 1700066O22Rik-203ENSMUST00000150994 961 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Col15a1O35206 Cryge-202ENSMUST00000161960 690 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Col15a1O35206 Swi5-207ENSMUST00000183946 768 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
Col15a1O35206 Gm38000-201ENSMUST00000192390 1215 ntBASIC17.4■□□□□ 0.38
Col15a1O35206 Gm32850-202ENSMUST00000209149 732 ntTSL 5 BASIC17.4■□□□□ 0.38
Col15a1O35206 Majin-201ENSMUST00000025699 1239 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Col15a1O35206 Dnajc17-201ENSMUST00000038439 1008 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Col15a1O35206 Taz-204ENSMUST00000124200 1742 ntTSL 1 (best) BASIC17.39■□□□□ 0.38
Col15a1O35206 Cidec-201ENSMUST00000032416 1703 ntAPPRIS P2 TSL 1 (best) BASIC17.39■□□□□ 0.38
Col15a1O35206 Tuft1-203ENSMUST00000196655 2156 ntTSL 5 BASIC17.39■□□□□ 0.38
Col15a1O35206 Slc22a13b-ps-201ENSMUST00000173185 1458 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Col15a1O35206 Top1mt-201ENSMUST00000000958 1903 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Col15a1O35206 Gm43598-201ENSMUST00000202482 2479 ntBASIC17.39■□□□□ 0.37
Col15a1O35206 Ric8b-202ENSMUST00000095385 2909 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Col15a1O35206 Scaf4-201ENSMUST00000039280 4165 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.37
Col15a1O35206 Pid1-207ENSMUST00000177458 2521 ntTSL 2 BASIC17.39■□□□□ 0.37
Col15a1O35206 Mtif2-202ENSMUST00000093239 2741 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Col15a1O35206 Pja1-203ENSMUST00000113792 3038 ntAPPRIS P4 TSL 5 BASIC17.39■□□□□ 0.37
Col15a1O35206 Rimkla-201ENSMUST00000049994 4097 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Col15a1O35206 Klhl29-201ENSMUST00000020958 7041 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Col15a1O35206 Tnnt3-217ENSMUST00000105957 1028 ntAPPRIS ALT2 TSL 5 BASIC17.39■□□□□ 0.37
Col15a1O35206 Upk3bl-202ENSMUST00000111137 1119 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
Col15a1O35206 Gm12134-201ENSMUST00000122109 520 ntBASIC17.39■□□□□ 0.37
Col15a1O35206 Pisd-ps1-203ENSMUST00000145164 789 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Col15a1O35206 Gm7619-201ENSMUST00000210649 1282 ntBASIC17.39■□□□□ 0.37
Col15a1O35206 Gm21769-201ENSMUST00000211922 111 ntBASIC17.39■□□□□ 0.37
Col15a1O35206 Gm19163-201ENSMUST00000223313 780 ntBASIC17.39■□□□□ 0.37
Col15a1O35206 Pdzrn3-201ENSMUST00000075994 4104 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Col15a1O35206 Olfr1156-203ENSMUST00000216726 3271 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.37
Col15a1O35206 B230209E15Rik-201ENSMUST00000209115 1597 ntTSL 5 BASIC17.39■□□□□ 0.37
Col15a1O35206 Psmd11-201ENSMUST00000017572 2848 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Col15a1O35206 Galnt13-204ENSMUST00000112636 7530 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Col15a1O35206 Gm45760-201ENSMUST00000212190 1782 ntBASIC17.38■□□□□ 0.37
Col15a1O35206 Ankrd17-202ENSMUST00000081914 8057 ntAPPRIS ALT2 TSL 5 BASIC17.38■□□□□ 0.37
Col15a1O35206 Slc41a3-201ENSMUST00000032177 2324 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Col15a1O35206 Nectin2-201ENSMUST00000075447 2735 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
Col15a1O35206 Ccdc88a-201ENSMUST00000040182 9376 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
Col15a1O35206 Tekt2-201ENSMUST00000030658 1492 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Col15a1O35206 9230102O04Rik-201ENSMUST00000114915 528 ntAPPRIS P1 TSL 2 BASIC17.38■□□□□ 0.37
Col15a1O35206 Gstt1-202ENSMUST00000120177 1105 ntTSL 2 BASIC17.38■□□□□ 0.37
Col15a1O35206 Atp6v0e-201ENSMUST00000015719 794 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Col15a1O35206 Mospd4-201ENSMUST00000180618 576 ntBASIC17.38■□□□□ 0.37
Col15a1O35206 Gm28638-201ENSMUST00000188152 288 ntTSL 5 BASIC17.38■□□□□ 0.37
Col15a1O35206 Gm5896-201ENSMUST00000189662 1024 ntBASIC17.38■□□□□ 0.37
Col15a1O35206 Rpl7a-ps10-201ENSMUST00000190579 798 ntBASIC17.38■□□□□ 0.37
Col15a1O35206 Gm31651-201ENSMUST00000198864 560 ntTSL 3 BASIC17.38■□□□□ 0.37
Col15a1O35206 Gm5565-201ENSMUST00000199463 1162 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
Col15a1O35206 AC139319.1-201ENSMUST00000223331 690 ntTSL 5 BASIC17.38■□□□□ 0.37
Col15a1O35206 AC132317.1-201ENSMUST00000227227 962 ntBASIC17.38■□□□□ 0.37
Col15a1O35206 Cma2-201ENSMUST00000089555 947 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Col15a1O35206 Rpl7a-ps3-201ENSMUST00000090170 796 ntBASIC17.38■□□□□ 0.37
Col15a1O35206 Rpl7a-ps5-201ENSMUST00000095218 807 ntAPPRIS P1 BASIC17.38■□□□□ 0.37
Col15a1O35206 Bcor-204ENSMUST00000115513 6941 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Col15a1O35206 Plekhb1-203ENSMUST00000107044 1806 ntAPPRIS ALT1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Col15a1O35206 Lrig2-207ENSMUST00000199070 5991 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Col15a1O35206 Srsf11-204ENSMUST00000121326 3106 ntAPPRIS P4 TSL 5 BASIC17.37■□□□□ 0.37
Col15a1O35206 Myh10-204ENSMUST00000108673 1315 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Col15a1O35206 Mpi-201ENSMUST00000034856 1780 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Col15a1O35206 Serinc1-201ENSMUST00000020027 2880 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Col15a1O35206 Prdm4-201ENSMUST00000037646 3877 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Col15a1O35206 Pacrg-201ENSMUST00000041463 1475 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Col15a1O35206 Wdr26-207ENSMUST00000162819 6619 ntAPPRIS P2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Col15a1O35206 Fam102a-201ENSMUST00000048375 4223 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Col15a1O35206 Rasal2-201ENSMUST00000078308 10047 ntAPPRIS P2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Col15a1O35206 Gm15738-202ENSMUST00000140892 427 ntTSL 2 BASIC17.37■□□□□ 0.37
Col15a1O35206 D230022J07Rik-201ENSMUST00000144735 1062 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Col15a1O35206 Gm24548-201ENSMUST00000158650 108 ntBASIC17.37■□□□□ 0.37
Col15a1O35206 Tead1-207ENSMUST00000165036 1248 ntTSL 5 BASIC17.37■□□□□ 0.37
Col15a1O35206 Tead1-212ENSMUST00000171197 1074 ntTSL 5 BASIC17.37■□□□□ 0.37
Col15a1O35206 Lsm2-207ENSMUST00000173004 870 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Col15a1O35206 1700015O11Rik-201ENSMUST00000180964 678 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Col15a1O35206 Gm28693-202ENSMUST00000190758 331 ntBASIC17.37■□□□□ 0.37
Col15a1O35206 AC152453.1-201ENSMUST00000218802 1254 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Col15a1O35206 Morn3-201ENSMUST00000031437 1128 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Col15a1O35206 1700120B22Rik-201ENSMUST00000054837 464 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Col15a1O35206 Sirt3-210ENSMUST00000211179 1606 ntAPPRIS ALT2 TSL 5 BASIC17.37■□□□□ 0.37
Col15a1O35206 Stk40-202ENSMUST00000116286 3860 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Col15a1O35206 Cspg5-201ENSMUST00000035058 3870 ntAPPRIS P2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Col15a1O35206 Slc6a4-202ENSMUST00000108402 2796 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
Col15a1O35206 Slc44a5-201ENSMUST00000089948 4098 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Col15a1O35206 Slc2a6-201ENSMUST00000045702 2138 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Col15a1O35206 Zfp219-212ENSMUST00000228580 2812 ntAPPRIS ALT2 BASIC17.36■□□□□ 0.37
Col15a1O35206 Zfp184-202ENSMUST00000102978 3198 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
Col15a1O35206 Usp49-201ENSMUST00000024779 8252 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Col15a1O35206 Usp43-201ENSMUST00000021288 4462 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
Col15a1O35206 Smarcd2-203ENSMUST00000106843 2548 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Col15a1O35206 Sapcd2-201ENSMUST00000028329 3121 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
Retrieved 100 of 76,532 protein–RNA pairs in 67.9 ms