Protein–RNA interactions for Protein: A0N8R0

Trav12d-1, T cell receptor alpha variable 12D-1 (Fragment), mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav12d-1A0N8R0 Slc13a5-201ENSMUST00000021161 3329 ntAPPRIS P2 TSL 1 (best) BASIC11.05□□□□□ -0.64
Trav12d-1A0N8R0 Exd2-201ENSMUST00000038185 3310 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Trav12d-1A0N8R0 Myh3-203ENSMUST00000165221 5994 ntAPPRIS P1 TSL 5 BASIC11.05□□□□□ -0.64
Trav12d-1A0N8R0 Paqr8-202ENSMUST00000167119 1472 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Trav12d-1A0N8R0 4933412A08Rik-201ENSMUST00000061046 1343 ntBASIC11.05□□□□□ -0.64
Trav12d-1A0N8R0 Aifm2-202ENSMUST00000080099 1329 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Trav12d-1A0N8R0 Tcf4-258ENSMUST00000202937 2103 ntTSL 5 BASIC11.05□□□□□ -0.64
Trav12d-1A0N8R0 Efhc1-201ENSMUST00000038447 2146 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Trav12d-1A0N8R0 Fam43a-201ENSMUST00000059078 3075 ntAPPRIS P1 BASIC11.05□□□□□ -0.64
Trav12d-1A0N8R0 Gm9920-204ENSMUST00000148544 2752 ntTSL 2 BASIC11.05□□□□□ -0.64
Trav12d-1A0N8R0 Brd2-201ENSMUST00000025193 4374 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Trav12d-1A0N8R0 Tmem51os1-204ENSMUST00000153023 3440 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Trav12d-1A0N8R0 Scara5-201ENSMUST00000022610 3794 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Trav12d-1A0N8R0 Irak2-202ENSMUST00000089022 2974 ntAPPRIS ALT2 TSL 1 (best) BASIC11.04□□□□□ -0.64
Trav12d-1A0N8R0 Hk1-202ENSMUST00000099691 4278 ntAPPRIS ALT2 TSL 1 (best) BASIC11.04□□□□□ -0.64
Trav12d-1A0N8R0 Map2k7-206ENSMUST00000110998 3497 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Trav12d-1A0N8R0 Ntm-203ENSMUST00000115237 2039 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Trav12d-1A0N8R0 Cxcl16-201ENSMUST00000019064 2699 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Trav12d-1A0N8R0 Rgs9bp-201ENSMUST00000069912 6590 ntAPPRIS P1 BASIC11.04□□□□□ -0.64
Trav12d-1A0N8R0 B3gat1-204ENSMUST00000160899 3801 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Trav12d-1A0N8R0 2310022A10Rik-204ENSMUST00000187032 1871 ntAPPRIS ALT2 TSL 1 (best) BASIC11.04□□□□□ -0.64
Trav12d-1A0N8R0 Sesn3-207ENSMUST00000209187 1700 ntTSL 5 BASIC11.04□□□□□ -0.64
Trav12d-1A0N8R0 Tfdp2-203ENSMUST00000165768 2212 ntAPPRIS ALT2 TSL 1 (best) BASIC11.04□□□□□ -0.64
Trav12d-1A0N8R0 Gngt2-201ENSMUST00000036088 1587 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Trav12d-1A0N8R0 Cln3-203ENSMUST00000098036 1571 ntAPPRIS ALT2 TSL 1 (best) BASIC11.04□□□□□ -0.64
Trav12d-1A0N8R0 Ap2a1-201ENSMUST00000085399 3442 ntAPPRIS P1 TSL 5 BASIC11.04□□□□□ -0.64
Trav12d-1A0N8R0 Nrn1-204ENSMUST00000224323 1779 ntBASIC11.04□□□□□ -0.64
Trav12d-1A0N8R0 Ap1s2-201ENSMUST00000033734 1785 ntAPPRIS ALT1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Trav12d-1A0N8R0 Gabpb1-205ENSMUST00000110424 2613 ntAPPRIS P3 TSL 1 (best) BASIC11.04□□□□□ -0.64
Trav12d-1A0N8R0 Nnat-202ENSMUST00000109526 1213 ntAPPRIS P4 TSL 1 (best) BASIC11.04□□□□□ -0.64
Trav12d-1A0N8R0 Shf-202ENSMUST00000110530 910 ntAPPRIS ALT2 TSL 5 BASIC11.04□□□□□ -0.64
Trav12d-1A0N8R0 Rpl36al-203ENSMUST00000110620 757 ntAPPRIS P1 TSL 2 BASIC11.04□□□□□ -0.64
Trav12d-1A0N8R0 Iqcf1-202ENSMUST00000164965 523 ntAPPRIS ALT2 TSL 1 (best) BASIC11.04□□□□□ -0.64
Trav12d-1A0N8R0 Gm18049-201ENSMUST00000208909 581 ntBASIC11.04□□□□□ -0.64
Trav12d-1A0N8R0 Gm45683-201ENSMUST00000210825 1247 ntBASIC11.04□□□□□ -0.64
Trav12d-1A0N8R0 Gm5628-201ENSMUST00000222318 1049 ntBASIC11.04□□□□□ -0.64
Trav12d-1A0N8R0 Mrpl27-201ENSMUST00000025278 756 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Trav12d-1A0N8R0 Zmynd15-202ENSMUST00000092958 2100 ntAPPRIS ALT2 TSL 5 BASIC11.04□□□□□ -0.64
Trav12d-1A0N8R0 Crybg2-213ENSMUST00000227683 5578 ntAPPRIS ALT2 BASIC11.04□□□□□ -0.64
Trav12d-1A0N8R0 Eya1-203ENSMUST00000168081 4366 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Trav12d-1A0N8R0 Ptch2-201ENSMUST00000030443 4382 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Trav12d-1A0N8R0 Nfic-202ENSMUST00000078185 3163 ntTSL 5 BASIC11.04□□□□□ -0.64
Trav12d-1A0N8R0 Gm10433-202ENSMUST00000146364 1984 ntTSL 2 BASIC11.04□□□□□ -0.64
Trav12d-1A0N8R0 Ddi2-202ENSMUST00000177592 3539 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Trav12d-1A0N8R0 Mark2-201ENSMUST00000025921 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC11.04□□□□□ -0.64
Trav12d-1A0N8R0 Gm5939-201ENSMUST00000119613 2874 ntBASIC11.04□□□□□ -0.64
Trav12d-1A0N8R0 Gga3-202ENSMUST00000106508 3582 ntAPPRIS ALT2 TSL 1 (best) BASIC11.04□□□□□ -0.64
Trav12d-1A0N8R0 Pkdrej-201ENSMUST00000064370 7058 ntAPPRIS P1 BASIC11.04□□□□□ -0.64
Trav12d-1A0N8R0 Olfr160-203ENSMUST00000215727 1667 ntAPPRIS P1 TSL 5 BASIC11.04□□□□□ -0.64
Trav12d-1A0N8R0 Nudt21-201ENSMUST00000034204 5010 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Trav12d-1A0N8R0 Slc16a3-208ENSMUST00000168579 4335 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Trav12d-1A0N8R0 Abat-202ENSMUST00000115838 1348 ntTSL 2 BASIC11.04□□□□□ -0.64
Trav12d-1A0N8R0 Otx2-209ENSMUST00000226501 2592 ntAPPRIS P1 BASIC11.04□□□□□ -0.64
Trav12d-1A0N8R0 Rasal3-201ENSMUST00000063824 3681 ntAPPRIS P3 TSL 1 (best) BASIC11.04□□□□□ -0.64
Trav12d-1A0N8R0 Gas7-201ENSMUST00000041611 2968 ntAPPRIS ALT2 TSL 1 (best) BASIC11.04□□□□□ -0.64
Trav12d-1A0N8R0 Pitpnm2-205ENSMUST00000161273 6792 ntAPPRIS ALT2 TSL 5 BASIC11.04□□□□□ -0.64
Trav12d-1A0N8R0 Ppp4r3b-201ENSMUST00000020755 5125 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Trav12d-1A0N8R0 Ctsa-203ENSMUST00000103093 2534 ntAPPRIS ALT2 TSL 1 (best) BASIC11.03□□□□□ -0.64
Trav12d-1A0N8R0 Olfr607-202ENSMUST00000214347 5706 ntAPPRIS P5 TSL 5 BASIC11.03□□□□□ -0.64
Trav12d-1A0N8R0 Trim2-203ENSMUST00000107691 7428 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Trav12d-1A0N8R0 Dysf-201ENSMUST00000081904 6660 ntAPPRIS P4 TSL 1 (best) BASIC11.03□□□□□ -0.64
Trav12d-1A0N8R0 Scg3-202ENSMUST00000213324 2152 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Trav12d-1A0N8R0 2810408A11Rik-202ENSMUST00000100969 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC11.03□□□□□ -0.64
Trav12d-1A0N8R0 Gpc2-205ENSMUST00000161827 2586 ntAPPRIS P2 TSL 1 (best) BASIC11.03□□□□□ -0.64
Trav12d-1A0N8R0 Ssr1-203ENSMUST00000225246 1825 ntBASIC11.03□□□□□ -0.64
Trav12d-1A0N8R0 Hps3-202ENSMUST00000108321 3385 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Trav12d-1A0N8R0 Rbmx-203ENSMUST00000114730 2019 ntAPPRIS P1 TSL 5 BASIC11.03□□□□□ -0.64
Trav12d-1A0N8R0 Pltp-202ENSMUST00000109316 2226 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Trav12d-1A0N8R0 Nbeal2-210ENSMUST00000167320 8803 ntAPPRIS P2 TSL 1 (best) BASIC11.03□□□□□ -0.64
Trav12d-1A0N8R0 Xrcc3-201ENSMUST00000021715 2422 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Trav12d-1A0N8R0 Gm21984-201ENSMUST00000123117 822 ntTSL 5 BASIC11.03□□□□□ -0.64
Trav12d-1A0N8R0 Kif16bos-201ENSMUST00000124774 495 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Trav12d-1A0N8R0 Nudcd2-203ENSMUST00000127382 727 ntTSL 2 BASIC11.03□□□□□ -0.64
Trav12d-1A0N8R0 Gm15701-201ENSMUST00000129559 573 ntTSL 3 BASIC11.03□□□□□ -0.64
Trav12d-1A0N8R0 1700110K17Rik-202ENSMUST00000156511 927 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Trav12d-1A0N8R0 1700128F08Rik-202ENSMUST00000213708 717 ntBASIC11.03□□□□□ -0.64
Trav12d-1A0N8R0 Aurka-203ENSMUST00000109140 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC11.03□□□□□ -0.64
Trav12d-1A0N8R0 Gm10305-201ENSMUST00000195331 2475 ntBASIC11.03□□□□□ -0.64
Trav12d-1A0N8R0 Cnih4-204ENSMUST00000134115 3268 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Trav12d-1A0N8R0 Sall4-201ENSMUST00000029061 5073 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Trav12d-1A0N8R0 Rps6ka4-202ENSMUST00000170516 3105 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Trav12d-1A0N8R0 Rps6ka4-201ENSMUST00000025903 3105 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Trav12d-1A0N8R0 Slc22a2-201ENSMUST00000046959 2115 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Trav12d-1A0N8R0 Rnf224-202ENSMUST00000205192 1707 ntAPPRIS P1 BASIC11.03□□□□□ -0.64
Trav12d-1A0N8R0 Nt5c3b-202ENSMUST00000092689 1344 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Trav12d-1A0N8R0 Smarca4-204ENSMUST00000174008 5405 ntAPPRIS ALT1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Trav12d-1A0N8R0 Stau1-204ENSMUST00000109238 2976 ntAPPRIS ALT2 TSL 1 (best) BASIC11.03□□□□□ -0.64
Trav12d-1A0N8R0 Adam11-202ENSMUST00000103081 4620 ntAPPRIS P3 TSL 1 (best) BASIC11.03□□□□□ -0.64
Trav12d-1A0N8R0 Pcdhgc3-201ENSMUST00000076807 4687 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Trav12d-1A0N8R0 AC139350.1-201ENSMUST00000227064 1594 ntBASIC11.03□□□□□ -0.64
Trav12d-1A0N8R0 Rcsd1-201ENSMUST00000040357 2622 ntAPPRIS P4 TSL 1 (best) BASIC11.03□□□□□ -0.64
Trav12d-1A0N8R0 Cbl-206ENSMUST00000206147 3452 ntAPPRIS ALT2 TSL 5 BASIC11.03□□□□□ -0.64
Trav12d-1A0N8R0 Cbs-203ENSMUST00000118504 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC11.03□□□□□ -0.64
Trav12d-1A0N8R0 Gm1113-201ENSMUST00000183573 2434 ntAPPRIS P1 TSL 5 BASIC11.03□□□□□ -0.64
Trav12d-1A0N8R0 Prrt3-201ENSMUST00000101059 3304 ntAPPRIS P3 TSL 1 (best) BASIC11.02□□□□□ -0.64
Trav12d-1A0N8R0 Sfswap-201ENSMUST00000053737 3313 ntAPPRIS P1 TSL 5 BASIC11.02□□□□□ -0.64
Trav12d-1A0N8R0 Rad52-201ENSMUST00000032269 1617 ntAPPRIS P3 TSL 1 (best) BASIC11.02□□□□□ -0.64
Trav12d-1A0N8R0 Mrgprf-201ENSMUST00000033386 2087 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.64
Trav12d-1A0N8R0 Fbxo44-205ENSMUST00000151127 1403 ntTSL 1 (best) BASIC11.02□□□□□ -0.64
Trav12d-1A0N8R0 Dnmt3b-205ENSMUST00000103150 4070 ntAPPRIS ALT2 TSL 1 (best) BASIC11.02□□□□□ -0.64
Retrieved 100 of 76,532 protein–RNA pairs in 41.6 ms